RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 NPAS1Q99742 590 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 RBM4BQ9BQ04 359 aaKnown RBP5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 MRPL57Q9BQC6 102 aaKnown RBP5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 RTP3Q9BQQ7 232 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 SLC30A2Q9BRI3 323 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 NTPCRQ9BSD7 190 aaKnown RBP5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 RBM4Q9BWF3 364 aaKnown RBP5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 ITPAQ9BY32 194 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 SLC22A4Q9H015 551 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 TMEM245Q9H330 911 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 SYNDIG1Q9H7V2 258 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 CARS2Q9HA77 564 aaKnown RBP5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 TNFRSF12AQ9NP84 129 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 PAK6Q9NQU5 681 aaPredicted RBP5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 SDR39U1Q9NRG7 319 aaPredicted RBP5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 RGS18Q9NS28 235 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 PPP1R14DQ9NXH3 145 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 MAP3K20Q9NYL2 800 aaKnown RBP5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 TMOD3Q9NYL9 352 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 MORF4L1Q9UBU8 362 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 SLC9A2Q9UBY0 812 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 TEKT2Q9UIF3 430 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 KIF25Q9UIL4 384 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 RAB23Q9ULC3 237 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 RNF6Q9Y252 685 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 STYXL1Q9Y6J8 313 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 PTPRJQ12913 1337 aa5.16□□□□□ -1.58
LSM3P2-201ENST00000551246 RGPD3A6NKT7 1758 aaPredicted RBP5.15□□□□□ -1.58
LSM3P2-201ENST00000551246 RGPD4Q7Z3J3 1758 aa5.15□□□□□ -1.58
LSM3P2-201ENST00000551246 ZCWPW2A0A1B0GU75 182 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 A0A1W2PP18 115 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 TMEM82A0PJX8 343 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 SLC22A23A1A5C7 686 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 WDR27A2RRH5 827 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 PMS2P1A4D2B8 440 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 FAM86C2PA6NEL3 165 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 PCP4L1A6NKN8 68 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 C2orf81A6NN90 581 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 TMEM233B4DJY2 109 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 K7ENM7 598 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 SLC30A4O14863 429 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 KPNA5O15131 536 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 MUSKO15146 869 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 INPP4BO15327 924 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 XPNPEP2O43895 674 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 AIREO43918 545 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 SH3BP5O60239 455 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 SELENOFO60613 162 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 SLC43A1O75387 559 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 EEDO75530 441 aaKnown RBP5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 WBP4O75554 376 aaKnown RBP5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 CLEC3AO75596 197 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 GPX5O75715 221 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 WISP3O95389 354 aaPredicted RBP5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 NTSR2O95665 410 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 ANGPTL1O95841 491 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 CBX7O95931 251 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 LGI1O95970 557 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 NPPAP01160 153 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 PROS1P07225 676 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 FGF4P08620 206 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 PRR35P0CG20 571 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 CYP19A1P11511 503 aaPredicted RBP5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 SRFP11831 508 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 SELLP14151 372 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 STMN1P16949 149 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 CD72P21854 359 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 GADD45AP24522 165 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 PSMA2P25787 234 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 PRDX5P30044 214 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 MIPP30301 263 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 CALCRP30988 508 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 CA5AP35218 305 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 GLUD2P49448 558 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 MEOX2P50222 304 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 CLCN7P51798 805 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 DGKQP52824 942 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 NAGLUP54802 743 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 CLDN20P56880 219 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 HUNKP57058 714 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 EVA1CP58658 441 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 C1QTNF8P60827 252 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 LSM3P62310 102 aaKnown RBP5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 BTG1P62324 171 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 DYNLT1P63172 113 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 LIPEQ05469 1076 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 GRAPQ13588 217 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 CAMK1Q14012 370 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 ZNF169Q14929 603 aaPredicted RBP5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 MAD2L1BPQ15013 274 aaPredicted RBP5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 ZMYND11Q15326 602 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 TSC22D1Q15714 1073 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 DUSP6Q16828 381 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 QRICH1Q2TAL8 776 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 BRDTQ58F21 947 aaPredicted RBP5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 CELF3Q5SZQ8 465 aaKnown RBP5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 PDSS1Q5T2R2 415 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 FSTL4Q6MZW2 842 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 KDELC1Q6UW63 502 aa5.15□□□□□ -1.59
LSM3P2-201ENST00000551246 TMEM107Q6UX40 140 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms