RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 ZFYVE21Q9BQ24 234 aa10.41□□□□□ -0.74
VTI1BP3-201ENST00000550220 ZNF552Q9H707 407 aaPredicted RBP10.41□□□□□ -0.74
VTI1BP3-201ENST00000550220 ZNF304Q9HCX3 659 aa10.41□□□□□ -0.74
VTI1BP3-201ENST00000550220 MRPS30Q9NP92 439 aaKnown RBP10.41□□□□□ -0.74
VTI1BP3-201ENST00000550220 SLC22A11Q9NSA0 550 aa10.41□□□□□ -0.74
VTI1BP3-201ENST00000550220 CUEDC1Q9NWM3 386 aaPredicted RBP10.41□□□□□ -0.74
VTI1BP3-201ENST00000550220 ZNF282Q9UDV7 671 aaPredicted RBP10.41□□□□□ -0.74
VTI1BP3-201ENST00000550220 ZC3H7BQ9UGR2 993 aaKnown RBP10.41□□□□□ -0.74
VTI1BP3-201ENST00000550220 CIDEBQ9UHD4 219 aa10.41□□□□□ -0.74
VTI1BP3-201ENST00000550220 B3GNT3Q9Y2A9 372 aa10.41□□□□□ -0.74
VTI1BP3-201ENST00000550220 LRRK2Q5S007 2527 aa10.41□□□□□ -0.74
VTI1BP3-201ENST00000550220 A0A0J9YVX5 310 aa10.4□□□□□ -0.74
VTI1BP3-201ENST00000550220 A0A1W2PPV9 198 aa10.4□□□□□ -0.74
VTI1BP3-201ENST00000550220 OR2A25A4D2G3 310 aa10.4□□□□□ -0.74
VTI1BP3-201ENST00000550220 VSTM2BA6NLU5 285 aa10.4□□□□□ -0.74
VTI1BP3-201ENST00000550220 CES2O00748 559 aa10.4□□□□□ -0.74
VTI1BP3-201ENST00000550220 CTSVO60911 334 aa10.4□□□□□ -0.74
VTI1BP3-201ENST00000550220 MPC1LP0DKB6 136 aa10.4□□□□□ -0.74
VTI1BP3-201ENST00000550220 GP1BBP13224 206 aa10.4□□□□□ -0.74
VTI1BP3-201ENST00000550220 ITGA3P26006 1051 aa10.4□□□□□ -0.74
VTI1BP3-201ENST00000550220 SKIV2L2P42285 1042 aaKnown RBP10.4□□□□□ -0.74
VTI1BP3-201ENST00000550220 CLCN7P51798 805 aa10.4□□□□□ -0.74
VTI1BP3-201ENST00000550220 PNLIPRP1P54315 467 aa10.4□□□□□ -0.74
VTI1BP3-201ENST00000550220 PTK6Q13882 451 aa10.4□□□□□ -0.74
VTI1BP3-201ENST00000550220 CCSMST1Q4G0I0 132 aa10.4□□□□□ -0.74
VTI1BP3-201ENST00000550220 ACSBG2Q5FVE4 666 aa10.4□□□□□ -0.74
VTI1BP3-201ENST00000550220 AGAP7PQ5VUJ5 663 aa10.4□□□□□ -0.74
VTI1BP3-201ENST00000550220 PRAMEF13Q5VWM6 474 aa10.4□□□□□ -0.74
VTI1BP3-201ENST00000550220 ZNF470Q6ECI4 717 aa10.4□□□□□ -0.74
VTI1BP3-201ENST00000550220 FBXO42Q6P3S6 717 aa10.4□□□□□ -0.74
VTI1BP3-201ENST00000550220 TTC27Q6P3X3 843 aa10.4□□□□□ -0.74
VTI1BP3-201ENST00000550220 REXO1L1PQ8IX06 675 aa10.4□□□□□ -0.74
VTI1BP3-201ENST00000550220 PPIL6Q8IXY8 311 aa10.4□□□□□ -0.74
VTI1BP3-201ENST00000550220 ASB11Q8WXH4 323 aa10.4□□□□□ -0.74
VTI1BP3-201ENST00000550220 RERGQ96A58 199 aaPredicted RBP10.4□□□□□ -0.74
VTI1BP3-201ENST00000550220 SERPINB12Q96P63 405 aa10.4□□□□□ -0.74
VTI1BP3-201ENST00000550220 AGAP4Q96P64 663 aa10.4□□□□□ -0.74
VTI1BP3-201ENST00000550220 SPSB2Q99619 263 aa10.4□□□□□ -0.74
VTI1BP3-201ENST00000550220 PLCD4Q9BRC7 762 aa10.4□□□□□ -0.74
VTI1BP3-201ENST00000550220 FAM167BQ9BTA0 163 aa10.4□□□□□ -0.74
VTI1BP3-201ENST00000550220 NAT9Q9BTE0 207 aa10.4□□□□□ -0.74
VTI1BP3-201ENST00000550220 DPH7Q9BTV6 452 aa10.4□□□□□ -0.74
VTI1BP3-201ENST00000550220 MFRPQ9BY79 579 aa10.4□□□□□ -0.74
VTI1BP3-201ENST00000550220 ILKAPQ9H0C8 392 aaPredicted RBP10.4□□□□□ -0.74
VTI1BP3-201ENST00000550220 PCBD2Q9H0N5 130 aa10.4□□□□□ -0.74
VTI1BP3-201ENST00000550220 LRRC4CQ9HCJ2 640 aa10.4□□□□□ -0.74
VTI1BP3-201ENST00000550220 C20orf96Q9NUD7 363 aaPredicted RBP10.4□□□□□ -0.74
VTI1BP3-201ENST00000550220 MAD1L1Q9Y6D9 718 aa10.4□□□□□ -0.74
VTI1BP3-201ENST00000550220 PTPN13Q12923 2485 aa10.4□□□□□ -0.75
VTI1BP3-201ENST00000550220 ZCWPW2A0A1B0GU75 182 aa10.39□□□□□ -0.75
VTI1BP3-201ENST00000550220 ARHGEF33A8MVX0 844 aa10.39□□□□□ -0.75
VTI1BP3-201ENST00000550220 KIF5CO60282 957 aa10.39□□□□□ -0.75
VTI1BP3-201ENST00000550220 CNOT3O75175 753 aaKnown RBP10.39□□□□□ -0.75
VTI1BP3-201ENST00000550220 AGFG2O95081 481 aa10.39□□□□□ -0.75
VTI1BP3-201ENST00000550220 TTC4O95801 387 aa10.39□□□□□ -0.75
VTI1BP3-201ENST00000550220 EIF2S1P05198 315 aaKnown RBP10.39□□□□□ -0.75
VTI1BP3-201ENST00000550220 EZRP15311 586 aaKnown RBP10.39□□□□□ -0.75
VTI1BP3-201ENST00000550220 MCM3P25205 808 aa10.39□□□□□ -0.75
VTI1BP3-201ENST00000550220 MAGEA3P43357 314 aa10.39□□□□□ -0.75
VTI1BP3-201ENST00000550220 TERF1P54274 439 aa10.39□□□□□ -0.75
VTI1BP3-201ENST00000550220 AP2B1P63010 937 aa10.39□□□□□ -0.75
VTI1BP3-201ENST00000550220 RAPSNQ13702 412 aa10.39□□□□□ -0.75
VTI1BP3-201ENST00000550220 PPP1R7Q15435 360 aa10.39□□□□□ -0.75
VTI1BP3-201ENST00000550220 RBBP7Q16576 425 aa10.39□□□□□ -0.75
VTI1BP3-201ENST00000550220 NDUFA9Q16795 377 aa10.39□□□□□ -0.75
VTI1BP3-201ENST00000550220 TUBB8Q3ZCM7 444 aa10.39□□□□□ -0.75
VTI1BP3-201ENST00000550220 PLEKHN1Q494U1 663 aaPredicted RBP10.39□□□□□ -0.75
VTI1BP3-201ENST00000550220 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.39□□□□□ -0.75
VTI1BP3-201ENST00000550220 ANKRD22Q5VYY1 191 aa10.39□□□□□ -0.75
VTI1BP3-201ENST00000550220 ICE2Q659A1 982 aa10.39□□□□□ -0.75
VTI1BP3-201ENST00000550220 Q6ZS92 163 aa10.39□□□□□ -0.75
VTI1BP3-201ENST00000550220 PALM2Q8IXS6 379 aa10.39□□□□□ -0.75
VTI1BP3-201ENST00000550220 NAT8LQ8N9F0 302 aa10.39□□□□□ -0.75
VTI1BP3-201ENST00000550220 Q8NA96 180 aa10.39□□□□□ -0.75
VTI1BP3-201ENST00000550220 MCOLN3Q8TDD5 553 aa10.39□□□□□ -0.75
VTI1BP3-201ENST00000550220 MIEF2Q96C03 454 aa10.39□□□□□ -0.75
VTI1BP3-201ENST00000550220 MS4A14Q96JA4 679 aa10.39□□□□□ -0.75
VTI1BP3-201ENST00000550220 CABS1Q96KC9 395 aa10.39□□□□□ -0.75
VTI1BP3-201ENST00000550220 PSMG3-AS1Q96PY0 264 aa10.39□□□□□ -0.75
VTI1BP3-201ENST00000550220 PKP4Q99569 1192 aa10.39□□□□□ -0.75
VTI1BP3-201ENST00000550220 CRB3Q9BUF7 120 aa10.39□□□□□ -0.75
VTI1BP3-201ENST00000550220 FAM129AQ9BZQ8 928 aa10.39□□□□□ -0.75
VTI1BP3-201ENST00000550220 MAP10Q9P2G4 905 aa10.39□□□□□ -0.75
VTI1BP3-201ENST00000550220 FBXL4Q9UKA2 621 aa10.39□□□□□ -0.75
VTI1BP3-201ENST00000550220 RUVBL2Q9Y230 463 aaKnown RBP10.39□□□□□ -0.75
VTI1BP3-201ENST00000550220 DHRS7Q9Y394 339 aa10.39□□□□□ -0.75
VTI1BP3-201ENST00000550220 NEU2Q9Y3R4 380 aa10.39□□□□□ -0.75
VTI1BP3-201ENST00000550220 MED13Q9UHV7 2174 aa10.39□□□□□ -0.75
VTI1BP3-201ENST00000550220 IGLV3-12A0A075B6K2 115 aa10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 LOC105369274A0A096LPK9 316 aa10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 LOC102723532A0A0G2JNH3 316 aa10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 E7ENX8 843 aa10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 H0YGG7 62 aa10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 GOLGA8MH3BSY2 632 aa10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 GFYI3L273 518 aa10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 SMAPO00193 183 aa10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 SOCS6O14544 535 aa10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 ANXA5P08758 320 aa10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 ZGLP1P0C6A0 271 aa10.38□□□□□ -0.75
VTI1BP3-201ENST00000550220 PGAM1P18669 254 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms