RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 PAMP19021 973 aa12.84□□□□□ -0.35
GCN1-206ENST00000549815 OR1D4P47884 311 aa12.84□□□□□ -0.35
GCN1-206ENST00000549815 DHX34Q14147 1143 aaKnown RBP12.84□□□□□ -0.35
GCN1-206ENST00000549815 KLHL38Q2WGJ6 581 aa12.84□□□□□ -0.35
GCN1-206ENST00000549815 FAM214AQ32MH5 1076 aa12.84□□□□□ -0.35
GCN1-206ENST00000549815 PLEKHN1Q494U1 663 aaPredicted RBP12.84□□□□□ -0.35
GCN1-206ENST00000549815 ZNF549Q6P9A3 640 aa12.84□□□□□ -0.35
GCN1-206ENST00000549815 NEK10Q6ZWH5 1172 aa12.84□□□□□ -0.35
GCN1-206ENST00000549815 PAQR7Q86WK9 346 aa12.84□□□□□ -0.35
GCN1-206ENST00000549815 DENND6AQ8IWF6 608 aa12.84□□□□□ -0.35
GCN1-206ENST00000549815 NAT8LQ8N9F0 302 aa12.84□□□□□ -0.35
GCN1-206ENST00000549815 ZNF669Q96BR6 464 aaPredicted RBP12.84□□□□□ -0.35
GCN1-206ENST00000549815 SIGLEC10Q96LC7 697 aa12.84□□□□□ -0.35
GCN1-206ENST00000549815 PKP4Q99569 1192 aa12.84□□□□□ -0.35
GCN1-206ENST00000549815 ZBTB20Q9HC78 741 aaPredicted RBP12.84□□□□□ -0.35
GCN1-206ENST00000549815 XAB2Q9HCS7 855 aaKnown RBP12.84□□□□□ -0.35
GCN1-206ENST00000549815 ATP13A2Q9NQ11 1180 aa12.84□□□□□ -0.35
GCN1-206ENST00000549815 CTSFQ9UBX1 484 aa12.84□□□□□ -0.35
GCN1-206ENST00000549815 TSR3Q9UJK0 312 aaKnown RBP12.84□□□□□ -0.35
GCN1-206ENST00000549815 HS3ST3B1Q9Y662 390 aa12.84□□□□□ -0.35
GCN1-206ENST00000549815 SPTAN1Q13813 2472 aaKnown RBP12.84□□□□□ -0.35
GCN1-206ENST00000549815 HYKKA2RU49 373 aa12.83□□□□□ -0.36
GCN1-206ENST00000549815 USP1O94782 785 aa12.83□□□□□ -0.36
GCN1-206ENST00000549815 CTBP1Q13363 440 aa12.83□□□□□ -0.36
GCN1-206ENST00000549815 ARHGAP19Q14CB8 494 aa12.83□□□□□ -0.36
GCN1-206ENST00000549815 PRTGQ2VWP7 1150 aa12.83□□□□□ -0.36
GCN1-206ENST00000549815 CRB2Q5IJ48 1285 aa12.83□□□□□ -0.36
GCN1-206ENST00000549815 ZNF470Q6ECI4 717 aa12.83□□□□□ -0.36
GCN1-206ENST00000549815 CASC4Q6P4E1 433 aa12.83□□□□□ -0.36
GCN1-206ENST00000549815 CCDC137Q6PK04 289 aaKnown RBP12.83□□□□□ -0.36
GCN1-206ENST00000549815 SUSD1Q6UWL2 747 aa12.83□□□□□ -0.36
GCN1-206ENST00000549815 KIRREL2Q6UWL6 708 aa12.83□□□□□ -0.36
GCN1-206ENST00000549815 CYHR1Q6ZMK1 362 aa12.83□□□□□ -0.36
GCN1-206ENST00000549815 REXO1L1PQ8IX06 675 aa12.83□□□□□ -0.36
GCN1-206ENST00000549815 LRRC56Q8IYG6 542 aaPredicted RBP12.83□□□□□ -0.36
GCN1-206ENST00000549815 METTL27Q8N6F8 245 aaPredicted RBP12.83□□□□□ -0.36
GCN1-206ENST00000549815 FBXO15Q8NCQ5 510 aaPredicted RBP12.83□□□□□ -0.36
GCN1-206ENST00000549815 INPP5DQ92835 1189 aa12.83□□□□□ -0.36
GCN1-206ENST00000549815 C10orf90Q96M02 699 aa12.83□□□□□ -0.36
GCN1-206ENST00000549815 DPH7Q9BTV6 452 aa12.83□□□□□ -0.36
GCN1-206ENST00000549815 SOX17Q9H6I2 414 aaPredicted RBP12.83□□□□□ -0.36
GCN1-206ENST00000549815 SLAMF7Q9NQ25 335 aa12.83□□□□□ -0.36
GCN1-206ENST00000549815 FBXO6Q9NRD1 293 aaPredicted RBP12.83□□□□□ -0.36
GCN1-206ENST00000549815 KLHL42Q9P2K6 505 aa12.83□□□□□ -0.36
GCN1-206ENST00000549815 ZC3H7BQ9UGR2 993 aaKnown RBP12.83□□□□□ -0.36
GCN1-206ENST00000549815 VPS9D1Q9Y2B5 631 aa12.83□□□□□ -0.36
GCN1-206ENST00000549815 FAM169AQ9Y6X4 670 aa12.83□□□□□ -0.36
GCN1-206ENST00000549815 MDC1Q14676 2089 aaKnown RBP12.83□□□□□ -0.36
GCN1-206ENST00000549815 ESPL1Q14674 2120 aa12.83□□□□□ -0.36
GCN1-206ENST00000549815 BLACEA4D250 179 aa12.82□□□□□ -0.36
GCN1-206ENST00000549815 TCP11X1B4DZS4 312 aa12.82□□□□□ -0.36
GCN1-206ENST00000549815 E5RI56 91 aa12.82□□□□□ -0.36
GCN1-206ENST00000549815 E7ENX8 843 aa12.82□□□□□ -0.36
GCN1-206ENST00000549815 H0YGG7 62 aa12.82□□□□□ -0.36
GCN1-206ENST00000549815 GOLGA8MH3BSY2 632 aa12.82□□□□□ -0.36
GCN1-206ENST00000549815 KIF5CO60282 957 aa12.82□□□□□ -0.36
GCN1-206ENST00000549815 KLHL41O60662 606 aa12.82□□□□□ -0.36
GCN1-206ENST00000549815 ALOX12BO75342 701 aa12.82□□□□□ -0.36
GCN1-206ENST00000549815 MPC1LP0DKB6 136 aa12.82□□□□□ -0.36
GCN1-206ENST00000549815 GP1BBP13224 206 aa12.82□□□□□ -0.36
GCN1-206ENST00000549815 CMPK1P30085 196 aa12.82□□□□□ -0.36
GCN1-206ENST00000549815 SLC1A2P43004 574 aa12.82□□□□□ -0.36
GCN1-206ENST00000549815 PNLIPRP1P54315 467 aa12.82□□□□□ -0.36
GCN1-206ENST00000549815 EMP3P54852 163 aa12.82□□□□□ -0.36
GCN1-206ENST00000549815 ARF3P61204 181 aaPredicted RBP12.82□□□□□ -0.36
GCN1-206ENST00000549815 TAP2Q03519 686 aa12.82□□□□□ -0.36
GCN1-206ENST00000549815 AIMP2Q13155 320 aaKnown RBP12.82□□□□□ -0.36
GCN1-206ENST00000549815 CUL1Q13616 776 aa12.82□□□□□ -0.36
GCN1-206ENST00000549815 NAA25Q14CX7 972 aa12.82□□□□□ -0.36
GCN1-206ENST00000549815 ZNF425Q6IV72 752 aa12.82□□□□□ -0.36
GCN1-206ENST00000549815 IGFL2Q6UWQ7 119 aa12.82□□□□□ -0.36
GCN1-206ENST00000549815 Q6ZS92 163 aa12.82□□□□□ -0.36
GCN1-206ENST00000549815 SHISA6Q6ZSJ9 500 aa12.82□□□□□ -0.36
GCN1-206ENST00000549815 LMNTD2Q8IXW0 634 aa12.82□□□□□ -0.36
GCN1-206ENST00000549815 ARHGEF39Q8N4T4 335 aa12.82□□□□□ -0.36
GCN1-206ENST00000549815 ACTRT1Q8TDG2 376 aa12.82□□□□□ -0.36
GCN1-206ENST00000549815 COG1Q8WTW3 980 aa12.82□□□□□ -0.36
GCN1-206ENST00000549815 ZNF480Q8WV37 535 aa12.82□□□□□ -0.36
GCN1-206ENST00000549815 ASB11Q8WXH4 323 aa12.82□□□□□ -0.36
GCN1-206ENST00000549815 SMPDL3AQ92484 453 aa12.82□□□□□ -0.36
GCN1-206ENST00000549815 KCNJ9Q92806 393 aa12.82□□□□□ -0.36
GCN1-206ENST00000549815 SNRNP40Q96DI7 357 aaKnown RBP12.82□□□□□ -0.36
GCN1-206ENST00000549815 C19orf60Q96EN9 201 aa12.82□□□□□ -0.36
GCN1-206ENST00000549815 ZFYVE21Q9BQ24 234 aa12.82□□□□□ -0.36
GCN1-206ENST00000549815 PLCD4Q9BRC7 762 aa12.82□□□□□ -0.36
GCN1-206ENST00000549815 MESP1Q9BRJ9 268 aa12.82□□□□□ -0.36
GCN1-206ENST00000549815 ACAT2Q9BWD1 397 aa12.82□□□□□ -0.36
GCN1-206ENST00000549815 ZNF304Q9HCX3 659 aa12.82□□□□□ -0.36
GCN1-206ENST00000549815 FAM114A2Q9NRY5 505 aa12.82□□□□□ -0.36
GCN1-206ENST00000549815 SAMD15Q9P1V8 674 aa12.82□□□□□ -0.36
GCN1-206ENST00000549815 STOX2Q9P2F5 926 aaPredicted RBP12.82□□□□□ -0.36
GCN1-206ENST00000549815 CDC23Q9UJX2 597 aa12.82□□□□□ -0.36
GCN1-206ENST00000549815 FBXL4Q9UKA2 621 aa12.82□□□□□ -0.36
GCN1-206ENST00000549815 NXT1Q9UKK6 140 aaKnown RBP12.82□□□□□ -0.36
GCN1-206ENST00000549815 B3GNT3Q9Y2A9 372 aa12.82□□□□□ -0.36
GCN1-206ENST00000549815 DHRS7Q9Y394 339 aa12.82□□□□□ -0.36
GCN1-206ENST00000549815 MAU2Q9Y6X3 613 aa12.82□□□□□ -0.36
GCN1-206ENST00000549815 HIVEP3Q5T1R4 2406 aa12.82□□□□□ -0.36
GCN1-206ENST00000549815 ICE1Q9Y2F5 2266 aa12.81□□□□□ -0.36
GCN1-206ENST00000549815 IGLV3-12A0A075B6K2 115 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms