RNA–Protein interactions for RNA: ENST00000548524.5

USP15-208, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-208ENST00000548524 TTC29Q8NA56 475 aaPredicted RBP9.13□□□□□ -0.95
USP15-208ENST00000548524 SPATA4Q8NEY3 305 aa9.13□□□□□ -0.95
USP15-208ENST00000548524 OR2L3Q8NG85 312 aa9.13□□□□□ -0.95
USP15-208ENST00000548524 PROKR1Q8TCW9 393 aa9.13□□□□□ -0.95
USP15-208ENST00000548524 CD200R1Q8TD46 325 aa9.13□□□□□ -0.95
USP15-208ENST00000548524 THAP4Q8WY91 577 aa9.13□□□□□ -0.95
USP15-208ENST00000548524 DLG3Q92796 817 aa9.13□□□□□ -0.95
USP15-208ENST00000548524 ZUFSPQ96AP4 578 aa9.13□□□□□ -0.95
USP15-208ENST00000548524 SELENOSQ9BQE4 189 aa9.13□□□□□ -0.95
USP15-208ENST00000548524 ACAT2Q9BWD1 397 aa9.13□□□□□ -0.95
USP15-208ENST00000548524 NLNQ9BYT8 704 aa9.13□□□□□ -0.95
USP15-208ENST00000548524 ABCF3Q9NUQ8 709 aa9.13□□□□□ -0.95
USP15-208ENST00000548524 IFT80Q9P2H3 777 aaPredicted RBP9.13□□□□□ -0.95
USP15-208ENST00000548524 DHCR7Q9UBM7 475 aaKnown RBP9.13□□□□□ -0.95
USP15-208ENST00000548524 NDOR1Q9UHB4 597 aa9.13□□□□□ -0.95
USP15-208ENST00000548524 TUBD1Q9UJT1 453 aa9.13□□□□□ -0.95
USP15-208ENST00000548524 PADI2Q9Y2J8 665 aa9.13□□□□□ -0.95
USP15-208ENST00000548524 MED16Q9Y2X0 877 aa9.13□□□□□ -0.95
USP15-208ENST00000548524 ZFYVE26Q68DK2 2539 aa9.13□□□□□ -0.95
USP15-208ENST00000548524 AHCTF1Q8WYP5 2266 aa9.12□□□□□ -0.95
USP15-208ENST00000548524 PABPN1LA6NDY0 278 aaKnown RBP9.12□□□□□ -0.95
USP15-208ENST00000548524 EIF3FO00303 357 aaPredicted RBP9.12□□□□□ -0.95
USP15-208ENST00000548524 PRICKLE3O43900 615 aaPredicted RBP9.12□□□□□ -0.95
USP15-208ENST00000548524 CCNDBP1O95273 360 aa9.12□□□□□ -0.95
USP15-208ENST00000548524 AHSGP02765 367 aa9.12□□□□□ -0.95
USP15-208ENST00000548524 CD63P08962 238 aa9.12□□□□□ -0.95
USP15-208ENST00000548524 ERGP11308 486 aa9.12□□□□□ -0.95
USP15-208ENST00000548524 ALAS2P22557 587 aa9.12□□□□□ -0.95
USP15-208ENST00000548524 SKIV2L2P42285 1042 aaKnown RBP9.12□□□□□ -0.95
USP15-208ENST00000548524 RPL21P46778 160 aaKnown RBP9.12□□□□□ -0.95
USP15-208ENST00000548524 ARSFP54793 590 aa9.12□□□□□ -0.95
USP15-208ENST00000548524 MGAT5Q09328 741 aa9.12□□□□□ -0.95
USP15-208ENST00000548524 PDIA2Q13087 525 aaKnown RBP9.12□□□□□ -0.95
USP15-208ENST00000548524 CALCOCO2Q13137 446 aa9.12□□□□□ -0.95
USP15-208ENST00000548524 GRM7Q14831 915 aa9.12□□□□□ -0.95
USP15-208ENST00000548524 NCF4Q15080 339 aa9.12□□□□□ -0.95
USP15-208ENST00000548524 UGT8Q16880 541 aa9.12□□□□□ -0.95
USP15-208ENST00000548524 TCTE1Q5JU00 501 aa9.12□□□□□ -0.95
USP15-208ENST00000548524 TEDDM1Q5T9Z0 273 aa9.12□□□□□ -0.95
USP15-208ENST00000548524 THEMIS2Q5TEJ8 643 aa9.12□□□□□ -0.95
USP15-208ENST00000548524 LRRC8EQ6NSJ5 796 aa9.12□□□□□ -0.95
USP15-208ENST00000548524 TRMT10BQ6PF06 316 aaKnown RBP9.12□□□□□ -0.95
USP15-208ENST00000548524 FAM198BQ6UWH4 519 aa9.12□□□□□ -0.95
USP15-208ENST00000548524 SUSD1Q6UWL2 747 aa9.12□□□□□ -0.95
USP15-208ENST00000548524 ZNF517Q6ZMY9 492 aaPredicted RBP9.12□□□□□ -0.95
USP15-208ENST00000548524 PRICKLE2Q7Z3G6 844 aa9.12□□□□□ -0.95
USP15-208ENST00000548524 CNTN4Q8IWV2 1026 aa9.12□□□□□ -0.95
USP15-208ENST00000548524 MYO1HQ8N1T3 1032 aa9.12□□□□□ -0.95
USP15-208ENST00000548524 FBXO15Q8NCQ5 510 aaPredicted RBP9.12□□□□□ -0.95
USP15-208ENST00000548524 FBXO36Q8NEA4 188 aa9.12□□□□□ -0.95
USP15-208ENST00000548524 C9orf43Q8TAL5 461 aaPredicted RBP9.12□□□□□ -0.95
USP15-208ENST00000548524 ASB11Q8WXH4 323 aa9.12□□□□□ -0.95
USP15-208ENST00000548524 GBP5Q96PP8 586 aa9.12□□□□□ -0.95
USP15-208ENST00000548524 DHRS4Q9BTZ2 278 aa9.12□□□□□ -0.95
USP15-208ENST00000548524 DPH5Q9H2P9 285 aa9.12□□□□□ -0.95
USP15-208ENST00000548524 MRPS30Q9NP92 439 aaKnown RBP9.12□□□□□ -0.95
USP15-208ENST00000548524 STARD5Q9NSY2 213 aa9.12□□□□□ -0.95
USP15-208ENST00000548524 UTP6Q9NYH9 597 aaKnown RBP9.12□□□□□ -0.95
USP15-208ENST00000548524 ZFATQ9P243 1243 aa9.12□□□□□ -0.95
USP15-208ENST00000548524 SLC17A6Q9P2U8 582 aa9.12□□□□□ -0.95
USP15-208ENST00000548524 TCFL5Q9UL49 500 aa9.12□□□□□ -0.95
USP15-208ENST00000548524 CORO1CQ9ULV4 474 aaPredicted RBP9.12□□□□□ -0.95
USP15-208ENST00000548524 KCNMB2Q9Y691 235 aa9.12□□□□□ -0.95
USP15-208ENST00000548524 TEX264Q9Y6I9 313 aa9.12□□□□□ -0.95
USP15-208ENST00000548524 A0A0J9YVX5 310 aa9.11□□□□□ -0.95
USP15-208ENST00000548524 A0A1W2PPV9 198 aa9.11□□□□□ -0.95
USP15-208ENST00000548524 ARGFXA6NJG6 315 aa9.11□□□□□ -0.95
USP15-208ENST00000548524 H3BMH7 237 aa9.11□□□□□ -0.95
USP15-208ENST00000548524 MKRN2OSH3BPM6 223 aa9.11□□□□□ -0.95
USP15-208ENST00000548524 GFYI3L273 518 aa9.11□□□□□ -0.95
USP15-208ENST00000548524 RAD51CO43502 376 aa9.11□□□□□ -0.95
USP15-208ENST00000548524 SLC28A2O43868 658 aa9.11□□□□□ -0.95
USP15-208ENST00000548524 SRPX2O60687 465 aaPredicted RBP9.11□□□□□ -0.95
USP15-208ENST00000548524 RFPL1O75677 317 aa9.11□□□□□ -0.95
USP15-208ENST00000548524 SLC16A8O95907 504 aa9.11□□□□□ -0.95
USP15-208ENST00000548524 EIF2S1P05198 315 aaKnown RBP9.11□□□□□ -0.95
USP15-208ENST00000548524 C8GP07360 202 aa9.11□□□□□ -0.95
USP15-208ENST00000548524 CAPN1P07384 714 aa9.11□□□□□ -0.95
USP15-208ENST00000548524 PIM1P11309 404 aaPredicted RBP9.11□□□□□ -0.95
USP15-208ENST00000548524 PLA2G2AP14555 144 aa9.11□□□□□ -0.95
USP15-208ENST00000548524 GABRB3P28472 473 aa9.11□□□□□ -0.95
USP15-208ENST00000548524 PMS2P54278 862 aa9.11□□□□□ -0.95
USP15-208ENST00000548524 CDKN2DP55273 166 aa9.11□□□□□ -0.95
USP15-208ENST00000548524 VSX2P58304 361 aaPredicted RBP9.11□□□□□ -0.95
USP15-208ENST00000548524 NFKB2Q00653 900 aa9.11□□□□□ -0.95
USP15-208ENST00000548524 IL10RAQ13651 578 aa9.11□□□□□ -0.95
USP15-208ENST00000548524 SLC9A5Q14940 896 aa9.11□□□□□ -0.95
USP15-208ENST00000548524 NKAIN1Q4KMZ8 207 aa9.11□□□□□ -0.95
USP15-208ENST00000548524 LACTB2Q53H82 288 aaPredicted RBP9.11□□□□□ -0.95
USP15-208ENST00000548524 RBM20Q5T481 1227 aaKnown RBP9.11□□□□□ -0.95
USP15-208ENST00000548524 HECTD2Q5U5R9 776 aa9.11□□□□□ -0.95
USP15-208ENST00000548524 YOD1Q5VVQ6 348 aaPredicted RBP9.11□□□□□ -0.95
USP15-208ENST00000548524 ZNF385CQ66K41 422 aaPredicted RBP9.11□□□□□ -0.95
USP15-208ENST00000548524 STEAP4Q687X5 459 aa9.11□□□□□ -0.95
USP15-208ENST00000548524 FAM45BPQ6NSW5 357 aa9.11□□□□□ -0.95
USP15-208ENST00000548524 PAQR3Q6TCH7 311 aa9.11□□□□□ -0.95
USP15-208ENST00000548524 CYHR1Q6ZMK1 362 aa9.11□□□□□ -0.95
USP15-208ENST00000548524 CAPN12Q6ZSI9 719 aa9.11□□□□□ -0.95
USP15-208ENST00000548524 TTLL10Q6ZVT0 673 aa9.11□□□□□ -0.95
USP15-208ENST00000548524 ADCK2Q7Z695 626 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms