RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 ZFP1Q6P2D0 407 aa13.01□□□□□ -0.33
PTCH1-215ENST00000547672 ENPP7Q6UWV6 458 aa13.01□□□□□ -0.33
PTCH1-215ENST00000547672 MSANTD1Q6ZTZ1 278 aa13.01□□□□□ -0.33
PTCH1-215ENST00000547672 ADHFE1Q8IWW8 467 aa13.01□□□□□ -0.33
PTCH1-215ENST00000547672 UBALD2Q8IYN6 164 aa13.01□□□□□ -0.33
PTCH1-215ENST00000547672 FBXO27Q8NI29 283 aa13.01□□□□□ -0.33
PTCH1-215ENST00000547672 HMGCLL1Q8TB92 370 aa13.01□□□□□ -0.33
PTCH1-215ENST00000547672 POP5Q969H6 163 aaKnown RBP13.01□□□□□ -0.33
PTCH1-215ENST00000547672 C12orf66Q96MD2 445 aa13.01□□□□□ -0.33
PTCH1-215ENST00000547672 ANKRD27Q96NW4 1050 aa13.01□□□□□ -0.33
PTCH1-215ENST00000547672 NPAS2Q99743 824 aa13.01□□□□□ -0.33
PTCH1-215ENST00000547672 AIF1LQ9BQI0 150 aa13.01□□□□□ -0.33
PTCH1-215ENST00000547672 TRIM15Q9C019 465 aa13.01□□□□□ -0.33
PTCH1-215ENST00000547672 SLC6A17Q9H1V8 727 aa13.01□□□□□ -0.33
PTCH1-215ENST00000547672 MUC13Q9H3R2 512 aa13.01□□□□□ -0.33
PTCH1-215ENST00000547672 RMND5AQ9H871 391 aa13.01□□□□□ -0.33
PTCH1-215ENST00000547672 CARS2Q9HA77 564 aaKnown RBP13.01□□□□□ -0.33
PTCH1-215ENST00000547672 TRNAU1APQ9NX07 287 aaKnown RBP13.01□□□□□ -0.33
PTCH1-215ENST00000547672 TDRKHQ9Y2W6 561 aaKnown RBP13.01□□□□□ -0.33
PTCH1-215ENST00000547672 PRKAB1Q9Y478 270 aa13.01□□□□□ -0.33
PTCH1-215ENST00000547672 ZFC3H1O60293 1989 aaKnown RBP13.01□□□□□ -0.33
PTCH1-215ENST00000547672 NUMA1Q14980 2115 aa13.01□□□□□ -0.33
PTCH1-215ENST00000547672 F5P12259 2224 aa13.01□□□□□ -0.33
PTCH1-215ENST00000547672 PDZK1P1A8MUH7 402 aa13□□□□□ -0.33
PTCH1-215ENST00000547672 TNFP01375 233 aa13□□□□□ -0.33
PTCH1-215ENST00000547672 G6PDP11413 515 aa13□□□□□ -0.33
PTCH1-215ENST00000547672 PTX3P26022 381 aaPredicted RBP13□□□□□ -0.33
PTCH1-215ENST00000547672 VARSP26640 1264 aaKnown RBP13□□□□□ -0.33
PTCH1-215ENST00000547672 GSTM2P28161 218 aa13□□□□□ -0.33
PTCH1-215ENST00000547672 CD6P30203 668 aa13□□□□□ -0.33
PTCH1-215ENST00000547672 RPL3P39023 403 aaKnown RBP13□□□□□ -0.33
PTCH1-215ENST00000547672 BLKP51451 505 aa13□□□□□ -0.33
PTCH1-215ENST00000547672 CLDN8P56748 225 aa13□□□□□ -0.33
PTCH1-215ENST00000547672 UFM1P61960 85 aa13□□□□□ -0.33
PTCH1-215ENST00000547672 ABATP80404 500 aa13□□□□□ -0.33
PTCH1-215ENST00000547672 SRSF11Q05519 484 aaKnown RBP13□□□□□ -0.33
PTCH1-215ENST00000547672 ACSM2AQ08AH3 577 aa13□□□□□ -0.33
PTCH1-215ENST00000547672 TSTA3Q13630 321 aaPredicted RBP13□□□□□ -0.33
PTCH1-215ENST00000547672 NFYCQ13952 458 aa13□□□□□ -0.33
PTCH1-215ENST00000547672 ZXDCQ2QGD7 858 aaPredicted RBP13□□□□□ -0.33
PTCH1-215ENST00000547672 VPS26BQ4G0F5 336 aa13□□□□□ -0.33
PTCH1-215ENST00000547672 PIGGQ5H8A4 983 aa13□□□□□ -0.33
PTCH1-215ENST00000547672 TCHHL1Q5QJ38 904 aaPredicted RBP13□□□□□ -0.33
PTCH1-215ENST00000547672 ACSM2BQ68CK6 577 aa13□□□□□ -0.33
PTCH1-215ENST00000547672 ABRAXAS1Q6UWZ7 409 aa13□□□□□ -0.33
PTCH1-215ENST00000547672 RIPOR1Q6ZS17 1223 aa13□□□□□ -0.33
PTCH1-215ENST00000547672 LAS2Q8IYD9 372 aa13□□□□□ -0.33
PTCH1-215ENST00000547672 CAMKK1Q8N5S9 505 aa13□□□□□ -0.33
PTCH1-215ENST00000547672 DPP10Q8N608 796 aa13□□□□□ -0.33
PTCH1-215ENST00000547672 TTLQ8NG68 377 aa13□□□□□ -0.33
PTCH1-215ENST00000547672 OR7G3Q8NG95 312 aa13□□□□□ -0.33
PTCH1-215ENST00000547672 OR5AR1Q8NGP9 310 aa13□□□□□ -0.33
PTCH1-215ENST00000547672 WDR20Q8TBZ3 569 aa13□□□□□ -0.33
PTCH1-215ENST00000547672 PROKR1Q8TCW9 393 aa13□□□□□ -0.33
PTCH1-215ENST00000547672 MTFMTQ96DP5 389 aaKnown RBP13□□□□□ -0.33
PTCH1-215ENST00000547672 CAMK1GQ96NX5 476 aa13□□□□□ -0.33
PTCH1-215ENST00000547672 OR4K3Q96R72 315 aa13□□□□□ -0.33
PTCH1-215ENST00000547672 CENPKQ9BS16 269 aa13□□□□□ -0.33
PTCH1-215ENST00000547672 IER2Q9BTL4 223 aa13□□□□□ -0.33
PTCH1-215ENST00000547672 C1orf50Q9BV19 199 aa13□□□□□ -0.33
PTCH1-215ENST00000547672 ACPTQ9BZG2 426 aa13□□□□□ -0.33
PTCH1-215ENST00000547672 SPATA6Q9NWH7 488 aaPredicted RBP13□□□□□ -0.33
PTCH1-215ENST00000547672 SUCOQ9UBS9 1254 aaKnown RBP13□□□□□ -0.33
PTCH1-215ENST00000547672 PCOLCE2Q9UKZ9 415 aa13□□□□□ -0.33
PTCH1-215ENST00000547672 PSMD13Q9UNM6 376 aa13□□□□□ -0.33
PTCH1-215ENST00000547672 POMPQ9Y244 141 aa13□□□□□ -0.33
PTCH1-215ENST00000547672 WBP11Q9Y2W2 641 aaKnown RBP13□□□□□ -0.33
PTCH1-215ENST00000547672 L3MBTL1Q9Y468 752 aa13□□□□□ -0.33
PTCH1-215ENST00000547672 MYO10Q9HD67 2058 aa13□□□□□ -0.33
PTCH1-215ENST00000547672 FAM170BA6NMN3 283 aa12.99□□□□□ -0.33
PTCH1-215ENST00000547672 OR5K4A6NMS3 321 aa12.99□□□□□ -0.33
PTCH1-215ENST00000547672 E7EQ34 232 aa12.99□□□□□ -0.33
PTCH1-215ENST00000547672 FBP2O00757 339 aa12.99□□□□□ -0.33
PTCH1-215ENST00000547672 NDUFS2O75306 463 aa12.99□□□□□ -0.33
PTCH1-215ENST00000547672 ENTPD5O75356 428 aa12.99□□□□□ -0.33
PTCH1-215ENST00000547672 PSMG1O95456 288 aa12.99□□□□□ -0.33
PTCH1-215ENST00000547672 BCKDHAP12694 445 aa12.99□□□□□ -0.33
PTCH1-215ENST00000547672 AMD1P17707 334 aa12.99□□□□□ -0.33
PTCH1-215ENST00000547672 GCKP35557 465 aa12.99□□□□□ -0.33
PTCH1-215ENST00000547672 GRK3P35626 688 aa12.99□□□□□ -0.33
PTCH1-215ENST00000547672 RAB28P51157 221 aa12.99□□□□□ -0.33
PTCH1-215ENST00000547672 CCR8P51685 355 aa12.99□□□□□ -0.33
PTCH1-215ENST00000547672 SRP54P61011 504 aaKnown RBP12.99□□□□□ -0.33
PTCH1-215ENST00000547672 PPP2CBP62714 309 aa12.99□□□□□ -0.33
PTCH1-215ENST00000547672 PPP2CAP67775 309 aa12.99□□□□□ -0.33
PTCH1-215ENST00000547672 BNIP2Q12982 314 aa12.99□□□□□ -0.33
PTCH1-215ENST00000547672 CCSMST1Q4G0I0 132 aa12.99□□□□□ -0.33
PTCH1-215ENST00000547672 AASDHQ4L235 1098 aaPredicted RBP12.99□□□□□ -0.33
PTCH1-215ENST00000547672 NOXRED1Q6NXP6 359 aa12.99□□□□□ -0.33
PTCH1-215ENST00000547672 PACS2Q86VP3 889 aa12.99□□□□□ -0.33
PTCH1-215ENST00000547672 LRRC56Q8IYG6 542 aaPredicted RBP12.99□□□□□ -0.33
PTCH1-215ENST00000547672 LIX1Q8N485 282 aa12.99□□□□□ -0.33
PTCH1-215ENST00000547672 PPFIBP2Q8ND30 876 aa12.99□□□□□ -0.33
PTCH1-215ENST00000547672 TNIP2Q8NFZ5 429 aa12.99□□□□□ -0.33
PTCH1-215ENST00000547672 OR2L8Q8NGY9 312 aa12.99□□□□□ -0.33
PTCH1-215ENST00000547672 NEIL2Q969S2 332 aa12.99□□□□□ -0.33
PTCH1-215ENST00000547672 SLC22A18Q96BI1 424 aa12.99□□□□□ -0.33
PTCH1-215ENST00000547672 LRRC58Q96CX6 371 aa12.99□□□□□ -0.33
PTCH1-215ENST00000547672 TOE1Q96GM8 510 aaKnown RBP12.99□□□□□ -0.33
PTCH1-215ENST00000547672 BMFQ96LC9 184 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms