RNA–Protein interactions for RNA: ENST00000546735.5

TROAP-203, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 1,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-203ENST00000546735 PRAMEF13Q5VWM6 474 aa13.67□□□□□ -0.22
TROAP-203ENST00000546735 FBXO42Q6P3S6 717 aa13.67□□□□□ -0.22
TROAP-203ENST00000546735 Q6ZS92 163 aa13.67□□□□□ -0.22
TROAP-203ENST00000546735 RNF44Q7L0R7 432 aa13.67□□□□□ -0.22
TROAP-203ENST00000546735 CUZD1Q86UP6 607 aa13.67□□□□□ -0.22
TROAP-203ENST00000546735 CAND1Q86VP6 1230 aaKnown RBP13.67□□□□□ -0.22
TROAP-203ENST00000546735 LRRC8AQ8IWT6 810 aa13.67□□□□□ -0.22
TROAP-203ENST00000546735 TRIM58Q8NG06 486 aa13.67□□□□□ -0.22
TROAP-203ENST00000546735 OR9A1PQ8NGU1 263 aa13.67□□□□□ -0.22
TROAP-203ENST00000546735 MAGEC3Q8TD91 643 aa13.67□□□□□ -0.22
TROAP-203ENST00000546735 ZNF669Q96BR6 464 aaPredicted RBP13.67□□□□□ -0.22
TROAP-203ENST00000546735 MS4A14Q96JA4 679 aa13.67□□□□□ -0.22
TROAP-203ENST00000546735 DPH7Q9BTV6 452 aa13.67□□□□□ -0.22
TROAP-203ENST00000546735 ZNF304Q9HCX3 659 aa13.67□□□□□ -0.22
TROAP-203ENST00000546735 PLEKHB1Q9UF11 243 aaPredicted RBP13.67□□□□□ -0.22
TROAP-203ENST00000546735 FAM169AQ9Y6X4 670 aa13.67□□□□□ -0.22
TROAP-203ENST00000546735 USP9XQ93008 2570 aaPredicted RBP13.67□□□□□ -0.22
TROAP-203ENST00000546735 NBPF19A0A087WUL8 3843 aa13.66□□□□□ -0.22
TROAP-203ENST00000546735 OR2A25A4D2G3 310 aa13.66□□□□□ -0.22
TROAP-203ENST00000546735 VSTM2BA6NLU5 285 aa13.66□□□□□ -0.22
TROAP-203ENST00000546735 E5RI56 91 aa13.66□□□□□ -0.22
TROAP-203ENST00000546735 H3BMM5 538 aa13.66□□□□□ -0.22
TROAP-203ENST00000546735 FFAR3O14843 346 aa13.66□□□□□ -0.22
TROAP-203ENST00000546735 GPR42O15529 346 aa13.66□□□□□ -0.22
TROAP-203ENST00000546735 IPO13O94829 963 aaKnown RBP13.66□□□□□ -0.22
TROAP-203ENST00000546735 CBX6O95503 412 aa13.66□□□□□ -0.22
TROAP-203ENST00000546735 CMPK1P30085 196 aa13.66□□□□□ -0.22
TROAP-203ENST00000546735 CCZ1BP86790 482 aa13.66□□□□□ -0.22
TROAP-203ENST00000546735 CCZ1P86791 482 aaPredicted RBP13.66□□□□□ -0.22
TROAP-203ENST00000546735 CUL1Q13616 776 aa13.66□□□□□ -0.22
TROAP-203ENST00000546735 DHX34Q14147 1143 aaKnown RBP13.66□□□□□ -0.22
TROAP-203ENST00000546735 ANKRD20A4Q4UJ75 823 aa13.66□□□□□ -0.22
TROAP-203ENST00000546735 RNF187Q5TA31 235 aaPredicted RBP13.66□□□□□ -0.22
TROAP-203ENST00000546735 NEPROQ6NW34 567 aa13.66□□□□□ -0.22
TROAP-203ENST00000546735 CILP2Q8IUL8 1156 aa13.66□□□□□ -0.22
TROAP-203ENST00000546735 DENND6AQ8IWF6 608 aa13.66□□□□□ -0.22
TROAP-203ENST00000546735 PPFIBP2Q8ND30 876 aa13.66□□□□□ -0.22
TROAP-203ENST00000546735 OR11G2Q8NGC1 345 aa13.66□□□□□ -0.22
TROAP-203ENST00000546735 GIMAP7Q8NHV1 300 aa13.66□□□□□ -0.22
TROAP-203ENST00000546735 STT3BQ8TCJ2 826 aa13.66□□□□□ -0.22
TROAP-203ENST00000546735 TM9SF4Q92544 642 aa13.66□□□□□ -0.22
TROAP-203ENST00000546735 C10orf90Q96M02 699 aa13.66□□□□□ -0.22
TROAP-203ENST00000546735 TCF12Q99081 682 aa13.66□□□□□ -0.22
TROAP-203ENST00000546735 PKP4Q99569 1192 aa13.66□□□□□ -0.22
TROAP-203ENST00000546735 ZFYVE21Q9BQ24 234 aa13.66□□□□□ -0.22
TROAP-203ENST00000546735 CRB3Q9BUF7 120 aa13.66□□□□□ -0.22
TROAP-203ENST00000546735 FBXO6Q9NRD1 293 aaPredicted RBP13.66□□□□□ -0.22
TROAP-203ENST00000546735 ENAMQ9NRM1 1142 aa13.66□□□□□ -0.22
TROAP-203ENST00000546735 ABCF3Q9NUQ8 709 aa13.66□□□□□ -0.22
TROAP-203ENST00000546735 KLK4Q9Y5K2 254 aa13.66□□□□□ -0.22
TROAP-203ENST00000546735 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.65□□□□□ -0.22
TROAP-203ENST00000546735 CTAGE9A4FU28 777 aa13.65□□□□□ -0.22
TROAP-203ENST00000546735 H0YGG7 62 aa13.65□□□□□ -0.22
TROAP-203ENST00000546735 MYO1CO00159 1063 aa13.65□□□□□ -0.22
TROAP-203ENST00000546735 PFDN6O15212 129 aa13.65□□□□□ -0.22
TROAP-203ENST00000546735 KLHL41O60662 606 aa13.65□□□□□ -0.22
TROAP-203ENST00000546735 PSIP1O75475 530 aaKnown RBP13.65□□□□□ -0.22
TROAP-203ENST00000546735 USP1O94782 785 aa13.65□□□□□ -0.22
TROAP-203ENST00000546735 ERVK-10P10266 1014 aa13.65□□□□□ -0.22
TROAP-203ENST00000546735 ERGP11308 486 aa13.65□□□□□ -0.22
TROAP-203ENST00000546735 PAMP19021 973 aa13.65□□□□□ -0.22
TROAP-203ENST00000546735 VARSP26640 1264 aaKnown RBP13.65□□□□□ -0.22
TROAP-203ENST00000546735 ATP5DP30049 168 aa13.65□□□□□ -0.22
TROAP-203ENST00000546735 RPA3P35244 121 aaPredicted RBP13.65□□□□□ -0.22
TROAP-203ENST00000546735 MAGEA6P43360 314 aa13.65□□□□□ -0.22
TROAP-203ENST00000546735 CLCN7P51798 805 aa13.65□□□□□ -0.22
TROAP-203ENST00000546735 ADARP55265 1226 aaKnown RBP13.65□□□□□ -0.22
TROAP-203ENST00000546735 ARF3P61204 181 aaPredicted RBP13.65□□□□□ -0.22
TROAP-203ENST00000546735 SARNPP82979 210 aaKnown RBP13.65□□□□□ -0.22
TROAP-203ENST00000546735 KLC1Q07866 573 aa13.65□□□□□ -0.22
TROAP-203ENST00000546735 Q0VFX4 171 aa13.65□□□□□ -0.22
TROAP-203ENST00000546735 CTBP1Q13363 440 aa13.65□□□□□ -0.22
TROAP-203ENST00000546735 TUBB8Q3ZCM7 444 aa13.65□□□□□ -0.22
TROAP-203ENST00000546735 VWA2Q5GFL6 755 aa13.65□□□□□ -0.22
TROAP-203ENST00000546735 CRB2Q5IJ48 1285 aa13.65□□□□□ -0.22
TROAP-203ENST00000546735 ZNF470Q6ECI4 717 aa13.65□□□□□ -0.22
TROAP-203ENST00000546735 REXO1L1PQ8IX06 675 aa13.65□□□□□ -0.22
TROAP-203ENST00000546735 SMPDL3AQ92484 453 aa13.65□□□□□ -0.22
TROAP-203ENST00000546735 MAGOHBQ96A72 148 aaKnown RBP13.65□□□□□ -0.22
TROAP-203ENST00000546735 NACC2Q96BF6 587 aa13.65□□□□□ -0.22
TROAP-203ENST00000546735 C8orf44Q96CB5 159 aa13.65□□□□□ -0.22
TROAP-203ENST00000546735 THOC3Q96J01 351 aaKnown RBP13.65□□□□□ -0.22
TROAP-203ENST00000546735 CABS1Q96KC9 395 aa13.65□□□□□ -0.22
TROAP-203ENST00000546735 WDR77Q9BQA1 342 aaPredicted RBP13.65□□□□□ -0.22
TROAP-203ENST00000546735 MRPS30Q9NP92 439 aaKnown RBP13.65□□□□□ -0.22
TROAP-203ENST00000546735 SEMA3GQ9NS98 782 aa13.65□□□□□ -0.22
TROAP-203ENST00000546735 HOMER3Q9NSC5 361 aa13.65□□□□□ -0.22
TROAP-203ENST00000546735 SAMD15Q9P1V8 674 aa13.65□□□□□ -0.22
TROAP-203ENST00000546735 TAC3Q9UHF0 121 aa13.65□□□□□ -0.22
TROAP-203ENST00000546735 ERRFI1Q9UJM3 462 aaPredicted RBP13.65□□□□□ -0.22
TROAP-203ENST00000546735 NXT1Q9UKK6 140 aaKnown RBP13.65□□□□□ -0.22
TROAP-203ENST00000546735 PPP2R2CQ9Y2T4 447 aa13.65□□□□□ -0.22
TROAP-203ENST00000546735 MED16Q9Y2X0 877 aa13.65□□□□□ -0.22
TROAP-203ENST00000546735 PCDHGA10Q9Y5H3 936 aa13.65□□□□□ -0.22
TROAP-203ENST00000546735 COPG1Q9Y678 874 aaKnown RBP13.65□□□□□ -0.22
TROAP-203ENST00000546735 USP9YO00507 2555 aaPredicted RBP13.65□□□□□ -0.22
TROAP-203ENST00000546735 IGKV1-8A0A0C4DH67 115 aa13.64□□□□□ -0.23
TROAP-203ENST00000546735 ZCWPW2A0A1B0GU75 182 aa13.64□□□□□ -0.23
TROAP-203ENST00000546735 SYF2O95926 243 aaKnown RBP13.64□□□□□ -0.23
TROAP-203ENST00000546735 ZGLP1P0C6A0 271 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms