RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 RCOR2Q8IZ40 523 aa13.99□□□□□ -0.17
RTN3-214ENST00000545432 OR4N4Q8N0Y3 316 aa13.99□□□□□ -0.17
RTN3-214ENST00000545432 MDS2Q8NDY4 140 aa13.99□□□□□ -0.17
RTN3-214ENST00000545432 IL17FQ96PD4 163 aa13.99□□□□□ -0.17
RTN3-214ENST00000545432 PPP1R2P1Q96PQ5 205 aa13.99□□□□□ -0.17
RTN3-214ENST00000545432 TBL1YQ9BQ87 522 aa13.99□□□□□ -0.17
RTN3-214ENST00000545432 VKORC1Q9BQB6 163 aa13.99□□□□□ -0.17
RTN3-214ENST00000545432 TMEM121Q9BTD3 319 aa13.99□□□□□ -0.17
RTN3-214ENST00000545432 CXXC4Q9H2H0 198 aa13.99□□□□□ -0.17
RTN3-214ENST00000545432 C10orf88Q9H8K7 445 aa13.99□□□□□ -0.17
RTN3-214ENST00000545432 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.99□□□□□ -0.17
RTN3-214ENST00000545432 MKL2Q9ULH7 1088 aa13.99□□□□□ -0.17
RTN3-214ENST00000545432 HYOU1Q9Y4L1 999 aa13.99□□□□□ -0.17
RTN3-214ENST00000545432 PRRC2AP48634 2157 aaKnown RBP13.99□□□□□ -0.17
RTN3-214ENST00000545432 GTF3C1Q12789 2109 aa13.99□□□□□ -0.17
RTN3-214ENST00000545432 OR2A25A4D2G3 310 aa13.98□□□□□ -0.17
RTN3-214ENST00000545432 FANCGO15287 622 aa13.98□□□□□ -0.17
RTN3-214ENST00000545432 DIAPH2O60879 1101 aa13.98□□□□□ -0.17
RTN3-214ENST00000545432 SLCO2B1O94956 709 aa13.98□□□□□ -0.17
RTN3-214ENST00000545432 OR56A5P0C7T3 313 aa13.98□□□□□ -0.17
RTN3-214ENST00000545432 EFNA3P52797 238 aa13.98□□□□□ -0.17
RTN3-214ENST00000545432 PMP22Q01453 160 aa13.98□□□□□ -0.17
RTN3-214ENST00000545432 PRPSAP1Q14558 356 aa13.98□□□□□ -0.17
RTN3-214ENST00000545432 ZNF766Q5HY98 468 aa13.98□□□□□ -0.17
RTN3-214ENST00000545432 DOLPP1Q86YN1 238 aa13.98□□□□□ -0.17
RTN3-214ENST00000545432 PRSS58Q8IYP2 241 aa13.98□□□□□ -0.17
RTN3-214ENST00000545432 AMER3Q8N944 861 aa13.98□□□□□ -0.17
RTN3-214ENST00000545432 HAUS1Q96CS2 278 aa13.98□□□□□ -0.17
RTN3-214ENST00000545432 SCMH1Q96GD3 660 aa13.98□□□□□ -0.17
RTN3-214ENST00000545432 DNAJC7Q99615 494 aa13.98□□□□□ -0.17
RTN3-214ENST00000545432 TUBB6Q9BUF5 446 aa13.98□□□□□ -0.17
RTN3-214ENST00000545432 ZC3H7BQ9UGR2 993 aaKnown RBP13.98□□□□□ -0.17
RTN3-214ENST00000545432 CDC14AQ9UNH5 594 aa13.98□□□□□ -0.17
RTN3-214ENST00000545432 EFR3BQ9Y2G0 817 aa13.98□□□□□ -0.17
RTN3-214ENST00000545432 ALG6Q9Y672 507 aa13.98□□□□□ -0.17
RTN3-214ENST00000545432 A0A1W2PPV9 198 aa13.97□□□□□ -0.17
RTN3-214ENST00000545432 FAM155BO75949 473 aa13.97□□□□□ -0.17
RTN3-214ENST00000545432 RPN2P04844 631 aa13.97□□□□□ -0.17
RTN3-214ENST00000545432 CYC1P08574 325 aa13.97□□□□□ -0.17
RTN3-214ENST00000545432 CD99P14209 185 aa13.97□□□□□ -0.17
RTN3-214ENST00000545432 FBLP22087 321 aaKnown RBP13.97□□□□□ -0.17
RTN3-214ENST00000545432 UBASH3AP57075 661 aa13.97□□□□□ -0.17
RTN3-214ENST00000545432 MEX3BQ6ZN04 569 aaKnown RBP13.97□□□□□ -0.17
RTN3-214ENST00000545432 ARHGEF18Q6ZSZ5 1173 aa13.97□□□□□ -0.17
RTN3-214ENST00000545432 C2orf73Q8N5S3 287 aaPredicted RBP13.97□□□□□ -0.17
RTN3-214ENST00000545432 AMER2Q8N7J2 671 aa13.97□□□□□ -0.17
RTN3-214ENST00000545432 OR2A1Q8NGT9 310 aa13.97□□□□□ -0.17
RTN3-214ENST00000545432 MAGED4Q96JG8 741 aa13.97□□□□□ -0.17
RTN3-214ENST00000545432 SPATA13Q96N96 652 aa13.97□□□□□ -0.17
RTN3-214ENST00000545432 TRIM51Q9BSJ1 452 aa13.97□□□□□ -0.17
RTN3-214ENST00000545432 CARD6Q9BX69 1037 aa13.97□□□□□ -0.17
RTN3-214ENST00000545432 MKKSQ9NPJ1 570 aaPredicted RBP13.97□□□□□ -0.17
RTN3-214ENST00000545432 TEKT2Q9UIF3 430 aa13.97□□□□□ -0.17
RTN3-214ENST00000545432 INTUQ9ULD6 942 aa13.97□□□□□ -0.17
RTN3-214ENST00000545432 FAM169AQ9Y6X4 670 aa13.97□□□□□ -0.17
RTN3-214ENST00000545432 ABCA4P78363 2273 aa13.96□□□□□ -0.17
RTN3-214ENST00000545432 H7C0C1 242 aa13.96□□□□□ -0.17
RTN3-214ENST00000545432 CDK2AP1O14519 115 aa13.96□□□□□ -0.17
RTN3-214ENST00000545432 PRPF4O43172 522 aaKnown RBP eCLIP13.96□□□□□ -0.173e-8■□□□□ 10.6
RTN3-214ENST00000545432 FOXS1O43638 330 aa13.96□□□□□ -0.17
RTN3-214ENST00000545432 OR1I1O60431 355 aa13.96□□□□□ -0.17
RTN3-214ENST00000545432 MLYCDO95822 493 aa13.96□□□□□ -0.17
RTN3-214ENST00000545432 ATP5OP48047 213 aa13.96□□□□□ -0.17
RTN3-214ENST00000545432 ART1P52961 327 aa13.96□□□□□ -0.17
RTN3-214ENST00000545432 EEF1A2Q05639 463 aaKnown RBP13.96□□□□□ -0.17
RTN3-214ENST00000545432 SPARCL1Q14515 664 aa13.96□□□□□ -0.17
RTN3-214ENST00000545432 SYTL3Q4VX76 610 aa13.96□□□□□ -0.17
RTN3-214ENST00000545432 GARNL3Q5VVW2 1013 aa13.96□□□□□ -0.17
RTN3-214ENST00000545432 NCCRP1Q6ZVX7 275 aaPredicted RBP13.96□□□□□ -0.17
RTN3-214ENST00000545432 OR2L3Q8NG85 312 aa13.96□□□□□ -0.17
RTN3-214ENST00000545432 ASZ1Q8WWH4 475 aa13.96□□□□□ -0.17
RTN3-214ENST00000545432 FRMD6Q96NE9 622 aa13.96□□□□□ -0.17
RTN3-214ENST00000545432 RAB11FIP5Q9BXF6 653 aa13.96□□□□□ -0.17
RTN3-214ENST00000545432 ASB1Q9Y576 335 aa13.96□□□□□ -0.17
RTN3-214ENST00000545432 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.96□□□□□ -0.174e-6■■■■□ 20.8
RTN3-214ENST00000545432 A0A0J9YVX5 310 aa13.95□□□□□ -0.18
RTN3-214ENST00000545432 RCCD1A6NED2 376 aa13.95□□□□□ -0.18
RTN3-214ENST00000545432 TTI1O43156 1089 aa13.95□□□□□ -0.18
RTN3-214ENST00000545432 ASNA1O43681 348 aa13.95□□□□□ -0.18
RTN3-214ENST00000545432 SPOPO43791 374 aa13.95□□□□□ -0.18
RTN3-214ENST00000545432 NRP2O60462 931 aa13.95□□□□□ -0.18
RTN3-214ENST00000545432 TNNT1P13805 278 aa13.95□□□□□ -0.18
RTN3-214ENST00000545432 MSNP26038 577 aaKnown RBP13.95□□□□□ -0.18
RTN3-214ENST00000545432 AOAHP28039 575 aa13.95□□□□□ -0.18
RTN3-214ENST00000545432 RELAQ04206 551 aa13.95□□□□□ -0.18
RTN3-214ENST00000545432 TFF3Q07654 80 aa13.95□□□□□ -0.18
RTN3-214ENST00000545432 TUBA3CQ13748 450 aa13.95□□□□□ -0.18
RTN3-214ENST00000545432 ACER2Q5QJU3 275 aa13.95□□□□□ -0.18
RTN3-214ENST00000545432 PLAG1Q6DJT9 500 aa13.95□□□□□ -0.18
RTN3-214ENST00000545432 TUBA3EQ6PEY2 450 aa13.95□□□□□ -0.18
RTN3-214ENST00000545432 NEK10Q6ZWH5 1172 aa13.95□□□□□ -0.18
RTN3-214ENST00000545432 FGD2Q7Z6J4 655 aa13.95□□□□□ -0.18
RTN3-214ENST00000545432 OR8K1Q8NGG5 319 aa13.95□□□□□ -0.18
RTN3-214ENST00000545432 ACTL9Q8TC94 416 aa13.95□□□□□ -0.18
RTN3-214ENST00000545432 AGAP11Q8TF27 550 aa13.95□□□□□ -0.18
RTN3-214ENST00000545432 RAD51AP1Q96B01 352 aa13.95□□□□□ -0.18
RTN3-214ENST00000545432 ZNF354BQ96LW1 612 aa13.95□□□□□ -0.18
RTN3-214ENST00000545432 ZFYVE21Q9BQ24 234 aa13.95□□□□□ -0.18
RTN3-214ENST00000545432 FERMT1Q9BQL6 677 aa13.95□□□□□ -0.18
RTN3-214ENST00000545432 SYNPO2LQ9H987 977 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms