RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 CTPS2Q9NRF8 586 aa4.24□□□□□ -1.73
SNHG1-219ENST00000542112 SPHK1Q9NYA1 384 aa4.24□□□□□ -1.73
SNHG1-219ENST00000542112 NINJ2Q9NZG7 142 aa4.24□□□□□ -1.73
SNHG1-219ENST00000542112 MPP6Q9NZW5 540 aa4.24□□□□□ -1.73
SNHG1-219ENST00000542112 POLLQ9UGP5 575 aa4.24□□□□□ -1.73
SNHG1-219ENST00000542112 UBQLN2Q9UHD9 624 aa4.24□□□□□ -1.73
SNHG1-219ENST00000542112 TMEFF2Q9UIK5 374 aaPredicted RBP4.24□□□□□ -1.73
SNHG1-219ENST00000542112 MGAT4AQ9UM21 535 aa4.24□□□□□ -1.73
SNHG1-219ENST00000542112 NENFQ9UMX5 172 aa4.24□□□□□ -1.73
SNHG1-219ENST00000542112 TFR2Q9UP52 801 aa4.24□□□□□ -1.73
SNHG1-219ENST00000542112 TNFSF13BQ9Y275 285 aa4.24□□□□□ -1.73
SNHG1-219ENST00000542112 TP53TG5Q9Y2B4 290 aa4.24□□□□□ -1.73
SNHG1-219ENST00000542112 ZNF281Q9Y2X9 895 aa4.24□□□□□ -1.73
SNHG1-219ENST00000542112 PCDHGB6Q9Y5F9 930 aa4.24□□□□□ -1.73
SNHG1-219ENST00000542112 PCDHA9Q9Y5H5 950 aa4.24□□□□□ -1.73
SNHG1-219ENST00000542112 PCDHA1Q9Y5I3 950 aa4.24□□□□□ -1.73
SNHG1-219ENST00000542112 U3KQ87 197 aa4.24□□□□□ -1.73
SNHG1-219ENST00000542112 AFDNP55196 1824 aaKnown RBP4.23□□□□□ -1.73
SNHG1-219ENST00000542112 MEGF6O75095 1541 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 hCG_1807616A0A1W2PRN6 198 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 MEIOCA2RUB1 952 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 FAM83GA6ND36 823 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 SLC15A5A6NIM6 579 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 RFPL4AA6NLU0 287 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 CLDN24A6NM45 220 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 EFCAB7A8K855 629 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 A8MXE2 369 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 A8MXK9 166 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 ALG1L2C9J202 215 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 KBTBD13C9JR72 458 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 E5RI56 91 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 RFPL4AL1F8VTS6 287 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 M0QZK8 103 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 ARVCFO00192 962 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 GPR171O14626 319 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 GSTA4O15217 222 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 CD3EAPO15446 510 aaKnown RBP4.23□□□□□ -1.73
SNHG1-219ENST00000542112 CHP2O43745 196 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 PRKYO43930 277 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 NPHS1O60500 1241 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 NBNO60934 754 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 FKTNO75072 461 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 TADA2AO75478 443 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 CRCPO75575 148 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 CABYRO75952 493 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 PAK4O96013 591 aaPredicted RBP4.23□□□□□ -1.73
SNHG1-219ENST00000542112 IGHA1P01876 353 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 MMP1P03956 469 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 PROCP04070 461 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 TPOP07202 933 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 SERPINF2P08697 491 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 ANXA5P08758 320 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 OR4E1P0C645 316 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 CLEC2LP0C7M8 214 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 ZNF806P0C7X5 589 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 JMJD7P0C870 316 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 COX5BP10606 129 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 JUPP14923 745 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 EEF1B2P24534 225 aaKnown RBP4.23□□□□□ -1.73
SNHG1-219ENST00000542112 DNASE1P24855 282 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 RPL10P27635 214 aaKnown RBP4.23□□□□□ -1.73
SNHG1-219ENST00000542112 GDI1P31150 447 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 GALNSP34059 522 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 RPA3P35244 121 aaPredicted RBP4.23□□□□□ -1.73
SNHG1-219ENST00000542112 RPS19P39019 145 aaKnown RBP4.23□□□□□ -1.73
SNHG1-219ENST00000542112 CEACAM6P40199 344 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 RPL35P42766 123 aaKnown RBP4.23□□□□□ -1.73
SNHG1-219ENST00000542112 MAPK9P45984 424 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 NSFP46459 744 aaKnown RBP4.23□□□□□ -1.73
SNHG1-219ENST00000542112 STAT5BP51692 787 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 ATXN1P54253 815 aaKnown RBP4.23□□□□□ -1.73
SNHG1-219ENST00000542112 BCAR1P56945 870 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 GTF2BQ00403 316 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 RHDQ02161 417 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 DSC2Q02487 901 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 SLC18A2Q05940 514 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 FSTL1Q12841 308 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 GAGE1Q13065 139 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 NME3Q13232 169 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 MAB21L1Q13394 359 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 BTN1A1Q13410 526 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 EFR3AQ14156 821 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 ZNF460Q14592 562 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 TMED2Q15363 201 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 SMAD2Q15796 467 aaKnown RBP4.23□□□□□ -1.73
SNHG1-219ENST00000542112 STXBP2Q15833 593 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 GUCA2BQ16661 112 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 AOC3Q16853 763 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 MTHFSDQ2M296 383 aaKnown RBP4.23□□□□□ -1.73
SNHG1-219ENST00000542112 HKDC1Q2TB90 917 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 ZNF404Q494X3 552 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 PAGE2BQ5JRK9 111 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 LGSNQ5TDP6 509 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 FAXCQ5TGI0 409 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 HLA-DQA1Q5Y7H0 255 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 RPL13AP3Q6NVV1 102 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 ARMC6Q6NXE6 501 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 ARHGAP11AQ6P4F7 1023 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 INTS5Q6P9B9 1019 aaKnown RBP4.23□□□□□ -1.73
SNHG1-219ENST00000542112 ZC3H14Q6PJT7 736 aaKnown RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms