RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 C12orf66Q96MD2 445 aa14.18□□□□□ -0.14
CACNB1-206ENST00000539338 CPED1A4D0V7 1026 aa14.18□□□□□ -0.14
CACNB1-206ENST00000539338 PI15O43692 258 aa14.18□□□□□ -0.14
CACNB1-206ENST00000539338 CYP11A1P05108 521 aa14.18□□□□□ -0.14
CACNB1-206ENST00000539338 PPP2R2BQ00005 443 aa14.18□□□□□ -0.14
CACNB1-206ENST00000539338 FAM91A1Q658Y4 838 aa14.18□□□□□ -0.14
CACNB1-206ENST00000539338 VITQ6UXI7 678 aa14.18□□□□□ -0.14
CACNB1-206ENST00000539338 C14orf80Q86SX3 495 aa14.18□□□□□ -0.14
CACNB1-206ENST00000539338 ZNF598Q86UK7 904 aaKnown RBP14.18□□□□□ -0.14
CACNB1-206ENST00000539338 FIZ1Q96SL8 496 aa14.18□□□□□ -0.14
CACNB1-206ENST00000539338 SLC38A3Q99624 504 aa14.18□□□□□ -0.14
CACNB1-206ENST00000539338 BCAS2O75934 225 aaPredicted RBP14.18□□□□□ -0.14
CACNB1-206ENST00000539338 MATN4O95460 622 aa14.18□□□□□ -0.14
CACNB1-206ENST00000539338 ALDOAP04075 364 aaKnown RBP14.18□□□□□ -0.14
CACNB1-206ENST00000539338 CSTF1Q05048 431 aaKnown RBP14.18□□□□□ -0.14
CACNB1-206ENST00000539338 CRTC2Q53ET0 693 aaPredicted RBP14.18□□□□□ -0.14
CACNB1-206ENST00000539338 MEIOBQ8N635 442 aa14.18□□□□□ -0.14
CACNB1-206ENST00000539338 C1orf52Q8N6N3 182 aaKnown RBP14.18□□□□□ -0.14
CACNB1-206ENST00000539338 ZNF366Q8N895 744 aa14.18□□□□□ -0.14
CACNB1-206ENST00000539338 C2CD4AQ8NCU7 369 aaPredicted RBP14.18□□□□□ -0.14
CACNB1-206ENST00000539338 DNAJB8Q8NHS0 232 aa14.18□□□□□ -0.14
CACNB1-206ENST00000539338 SLC22A17Q8WUG5 538 aa14.18□□□□□ -0.14
CACNB1-206ENST00000539338 ZNF347Q96SE7 839 aa14.18□□□□□ -0.14
CACNB1-206ENST00000539338 TMEM165Q9HC07 324 aa14.18□□□□□ -0.14
CACNB1-206ENST00000539338 MALT1Q9UDY8 824 aa14.18□□□□□ -0.14
CACNB1-206ENST00000539338 MAFFQ9ULX9 164 aa14.18□□□□□ -0.14
CACNB1-206ENST00000539338 PMF1-BGLAPU3KQ54 211 aa14.18□□□□□ -0.14
CACNB1-206ENST00000539338 PIRO00625 290 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 DIRAS1O95057 198 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 SLC35G6P0C7Q6 338 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 CSTF2P33240 577 aaKnown RBP eCLIP14.17□□□□□ -0.14
CACNB1-206ENST00000539338 STC1P52823 247 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 SCN1BQ07699 218 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 FRG2Q64ET8 278 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 SLC25A24Q6NUK1 477 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 TAMM41Q96BW9 452 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 FRG2BQ96QU4 278 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 YIPF4Q9BSR8 244 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 TFPIP10646 304 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 MOGSQ13724 837 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 DSC3Q14574 896 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 TIGD6Q17RP2 521 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 TBC1D25Q3MII6 688 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 UBAP2Q5T6F2 1119 aaKnown RBP14.17□□□□□ -0.14
CACNB1-206ENST00000539338 TRPV3Q8NET8 790 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 ARMC5Q96C12 935 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 GFM1Q96RP9 751 aaKnown RBP14.17□□□□□ -0.14
CACNB1-206ENST00000539338 SLC35A5Q9BS91 424 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 POLR2J3Q9H1A7 115 aaKnown RBP14.17□□□□□ -0.14
CACNB1-206ENST00000539338 OR51V1Q9H2C8 321 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 ACTR3BQ9P1U1 418 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 TMX2-CTNND1H3BSU7 103 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 RSL1D1O76021 490 aaKnown RBP14.17□□□□□ -0.14
CACNB1-206ENST00000539338 AGXTP21549 392 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 HNMTP50135 292 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 CLCN4P51793 760 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 GDPD4Q6W3E5 623 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 BIRC7Q96CA5 298 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 ZBED6CLQ96FA7 236 aaPredicted RBP14.17□□□□□ -0.14
CACNB1-206ENST00000539338 FBXL20Q96IG2 436 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 P2RY13Q9BPV8 354 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 A0A1W2PP18 115 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 KHNYNO15037 678 aaKnown RBP14.17□□□□□ -0.14
CACNB1-206ENST00000539338 ZNF217O75362 1048 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 HOXB2P14652 356 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 ALAS2P22557 587 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 TIE1P35590 1138 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 SLC10A2Q12908 348 aaPredicted RBP14.17□□□□□ -0.14
CACNB1-206ENST00000539338 ZBED5Q49AG3 693 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 RAB6CQ53S08 254 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 PACRGLQ8N7B6 248 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 STON2Q8WXE9 905 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 RAB6CQ9H0N0 254 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 LIN28AQ9H9Z2 209 aaKnown RBP14.17□□□□□ -0.14
CACNB1-206ENST00000539338 SLC35C2Q9NQQ7 365 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 BEST1O76090 585 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 FAM163BP0C2L3 166 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 GMPRP36959 345 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 ZNF678Q5SXM1 525 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 FAAH2Q6GMR7 532 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 AMZ2Q86W34 360 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 LGI4Q8N135 537 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 CYB5D2Q8WUJ1 264 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 IPCEF1Q8WWN9 437 aaPredicted RBP14.17□□□□□ -0.14
CACNB1-206ENST00000539338 NXPE3Q969Y0 559 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 IL4I1Q96RQ9 567 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 CCDC106Q9BWC9 280 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 DERL2Q9GZP9 239 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 FNIP2Q9P278 1114 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 LRRC42Q9Y546 428 aa14.17□□□□□ -0.14
CACNB1-206ENST00000539338 WNT9AO14904 365 aa14.16□□□□□ -0.14
CACNB1-206ENST00000539338 IL7RP16871 459 aa14.16□□□□□ -0.14
CACNB1-206ENST00000539338 PTX3P26022 381 aaPredicted RBP14.16□□□□□ -0.14
CACNB1-206ENST00000539338 TAS2R50P59544 299 aa14.16□□□□□ -0.14
CACNB1-206ENST00000539338 IQCCQ4KMZ1 466 aa14.16□□□□□ -0.14
CACNB1-206ENST00000539338 CST9Q5W186 159 aa14.16□□□□□ -0.14
CACNB1-206ENST00000539338 Q6ZVU0 165 aa14.16□□□□□ -0.14
CACNB1-206ENST00000539338 ERMP1Q7Z2K6 904 aa14.16□□□□□ -0.14
CACNB1-206ENST00000539338 ERI1Q8IV48 349 aaKnown RBP14.16□□□□□ -0.14
CACNB1-206ENST00000539338 RFKQ969G6 155 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms