RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 TNFRSF19Q9NS68 423 aa3.83□□□□□ -1.8
CCDC7-209ENST00000539197 ZNF256Q9Y2P7 627 aaPredicted RBP3.83□□□□□ -1.8
CCDC7-209ENST00000539197 TMED3Q9Y3Q3 217 aa3.83□□□□□ -1.8
CCDC7-209ENST00000539197 TEX28O15482 410 aa3.82□□□□□ -1.8
CCDC7-209ENST00000539197 PTGER4P35408 488 aa3.82□□□□□ -1.8
CCDC7-209ENST00000539197 LYZP61626 148 aa3.82□□□□□ -1.8
CCDC7-209ENST00000539197 MAT1AQ00266 395 aaKnown RBP3.82□□□□□ -1.8
CCDC7-209ENST00000539197 SETQ01105 290 aaPredicted RBP3.82□□□□□ -1.8
CCDC7-209ENST00000539197 TMEM132DQ14C87 1099 aa3.82□□□□□ -1.8
CCDC7-209ENST00000539197 UGT3A2Q3SY77 523 aa3.82□□□□□ -1.8
CCDC7-209ENST00000539197 ALFQ53S48 1182 aa3.82□□□□□ -1.8
CCDC7-209ENST00000539197 FAM182AQ5T1J6 154 aa3.82□□□□□ -1.8
CCDC7-209ENST00000539197 MMS22LQ6ZRQ5 1243 aa3.82□□□□□ -1.8
CCDC7-209ENST00000539197 ADGRF2Q8IZF7 708 aa3.82□□□□□ -1.8
CCDC7-209ENST00000539197 SLC37A3Q8NCC5 494 aa3.82□□□□□ -1.8
CCDC7-209ENST00000539197 SSMEM1Q8WWF3 244 aa3.82□□□□□ -1.8
CCDC7-209ENST00000539197 C2orf48Q96LS8 159 aa3.82□□□□□ -1.8
CCDC7-209ENST00000539197 ATF6BQ99941 703 aa3.82□□□□□ -1.8
CCDC7-209ENST00000539197 PANK2Q9BZ23 570 aa3.82□□□□□ -1.8
CCDC7-209ENST00000539197 SLITRK2Q9H156 845 aa3.82□□□□□ -1.8
CCDC7-209ENST00000539197 MTHFD2LQ9H903 347 aaPredicted RBP3.82□□□□□ -1.8
CCDC7-209ENST00000539197 ANAPC11Q9NYG5 84 aa3.82□□□□□ -1.8
CCDC7-209ENST00000539197 NYAP2Q9P242 653 aa3.82□□□□□ -1.8
CCDC7-209ENST00000539197 KIF25-AS1Q9Y6Z4 181 aa3.82□□□□□ -1.8
CCDC7-209ENST00000539197 SLCO2B1O94956 709 aa3.81□□□□□ -1.8
CCDC7-209ENST00000539197 TNFAIP3P21580 790 aa3.81□□□□□ -1.8
CCDC7-209ENST00000539197 DRD3P35462 400 aa3.81□□□□□ -1.8
CCDC7-209ENST00000539197 DHRS7BQ6IAN0 325 aaPredicted RBP3.81□□□□□ -1.8
CCDC7-209ENST00000539197 C11orf63Q6NUN7 778 aa3.81□□□□□ -1.8
CCDC7-209ENST00000539197 ARHGAP22Q7Z5H3 698 aa3.81□□□□□ -1.8
CCDC7-209ENST00000539197 PARP8Q8N3A8 854 aa3.81□□□□□ -1.8
CCDC7-209ENST00000539197 NAXEQ8NCW5 288 aa3.81□□□□□ -1.8
CCDC7-209ENST00000539197 RHOXF1Q8NHV9 184 aa3.81□□□□□ -1.8
CCDC7-209ENST00000539197 PPM1MQ96MI6 270 aa3.81□□□□□ -1.8
CCDC7-209ENST00000539197 CDRT15Q96T59 188 aa3.81□□□□□ -1.8
CCDC7-209ENST00000539197 ADNPQ9H2P0 1102 aa3.81□□□□□ -1.8
CCDC7-209ENST00000539197 WSB2Q9NYS7 404 aaPredicted RBP3.81□□□□□ -1.8
CCDC7-209ENST00000539197 SEC63Q9UGP8 760 aaKnown RBP3.81□□□□□ -1.8
CCDC7-209ENST00000539197 A0A087WWV3 80 aa3.8□□□□□ -1.8
CCDC7-209ENST00000539197 TRIM49BA6NDI0 452 aa3.8□□□□□ -1.8
CCDC7-209ENST00000539197 NPIPB9F8W1W9 429 aa3.8□□□□□ -1.8
CCDC7-209ENST00000539197 SCGB1D1O95968 90 aa3.8□□□□□ -1.8
CCDC7-209ENST00000539197 CD4P01730 458 aa3.8□□□□□ -1.8
CCDC7-209ENST00000539197 GJA1P17302 382 aa3.8□□□□□ -1.8
CCDC7-209ENST00000539197 MPP1Q00013 466 aa3.8□□□□□ -1.8
CCDC7-209ENST00000539197 RNASEH2BQ5TBB1 312 aaKnown RBP3.8□□□□□ -1.8
CCDC7-209ENST00000539197 MMD2Q8IY49 270 aa3.8□□□□□ -1.8
CCDC7-209ENST00000539197 SAT2Q96F10 170 aaPredicted RBP3.8□□□□□ -1.8
CCDC7-209ENST00000539197 C4orf45Q96LM5 186 aa3.8□□□□□ -1.8
CCDC7-209ENST00000539197 PAFAH2Q99487 392 aa3.8□□□□□ -1.8
CCDC7-209ENST00000539197 WNT5BQ9H1J7 359 aa3.8□□□□□ -1.8
CCDC7-209ENST00000539197 LNPEPQ9UIQ6 1025 aa3.8□□□□□ -1.8
CCDC7-209ENST00000539197 R4GN57 208 aa3.8□□□□□ -1.8
CCDC7-209ENST00000539197 IGLV4-3A0A075B6K6 122 aa3.79□□□□□ -1.8
CCDC7-209ENST00000539197 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.79□□□□□ -1.8
CCDC7-209ENST00000539197 MEIS2O14770 477 aa3.79□□□□□ -1.8
CCDC7-209ENST00000539197 TOMM70O94826 608 aa3.79□□□□□ -1.8
CCDC7-209ENST00000539197 MAN1A1P33908 653 aa3.79□□□□□ -1.8
CCDC7-209ENST00000539197 ZNF177Q13360 481 aaPredicted RBP3.79□□□□□ -1.8
CCDC7-209ENST00000539197 ITGA7Q13683 1181 aa3.79□□□□□ -1.8
CCDC7-209ENST00000539197 RFTN1Q14699 578 aaPredicted RBP3.79□□□□□ -1.8
CCDC7-209ENST00000539197 TMEM173Q86WV6 379 aaPredicted RBP3.79□□□□□ -1.8
CCDC7-209ENST00000539197 OR4N5Q8IXE1 308 aa3.79□□□□□ -1.8
CCDC7-209ENST00000539197 TTC39CQ8N584 583 aa3.79□□□□□ -1.8
CCDC7-209ENST00000539197 RTL3Q8N8U3 475 aaKnown RBP3.79□□□□□ -1.8
CCDC7-209ENST00000539197 TDRD5Q8NAT2 981 aaKnown RBP3.79□□□□□ -1.8
CCDC7-209ENST00000539197 C1orf131Q8NDD1 294 aaKnown RBP3.79□□□□□ -1.8
CCDC7-209ENST00000539197 ZIM3Q96PE6 472 aa3.79□□□□□ -1.8
CCDC7-209ENST00000539197 UNC45AQ9H3U1 944 aa3.79□□□□□ -1.8
CCDC7-209ENST00000539197 KRT84Q9NSB2 600 aa3.79□□□□□ -1.8
CCDC7-209ENST00000539197 OLA1Q9NTK5 396 aaKnown RBP3.79□□□□□ -1.8
CCDC7-209ENST00000539197 ARHGEF38Q9NXL2 777 aa3.79□□□□□ -1.8
CCDC7-209ENST00000539197 CREB3O43889 395 aa3.78□□□□□ -1.8
CCDC7-209ENST00000539197 ZNF354AO60765 605 aaPredicted RBP3.78□□□□□ -1.8
CCDC7-209ENST00000539197 KRT33AO76009 404 aa3.78□□□□□ -1.8
CCDC7-209ENST00000539197 BCL10O95999 233 aa3.78□□□□□ -1.8
CCDC7-209ENST00000539197 HAPLN1P10915 354 aaPredicted RBP3.78□□□□□ -1.8
CCDC7-209ENST00000539197 MYL7Q01449 175 aa3.78□□□□□ -1.8
CCDC7-209ENST00000539197 DHODHQ02127 395 aa3.78□□□□□ -1.8
CCDC7-209ENST00000539197 AIMP2Q13155 320 aaKnown RBP3.78□□□□□ -1.8
CCDC7-209ENST00000539197 PTPN14Q15678 1187 aa3.78□□□□□ -1.8
CCDC7-209ENST00000539197 PRR30Q53SZ7 412 aaPredicted RBP3.78□□□□□ -1.8
CCDC7-209ENST00000539197 GARNL3Q5VVW2 1013 aa3.78□□□□□ -1.8
CCDC7-209ENST00000539197 RSBN1Q5VWQ0 802 aaPredicted RBP3.78□□□□□ -1.8
CCDC7-209ENST00000539197 JAKMIP3Q5VZ66 844 aa3.78□□□□□ -1.8
CCDC7-209ENST00000539197 DMKNQ6E0U4 476 aaPredicted RBP3.78□□□□□ -1.8
CCDC7-209ENST00000539197 EXD1Q8NHP7 514 aa3.78□□□□□ -1.8
CCDC7-209ENST00000539197 TLE6Q9H808 572 aa3.78□□□□□ -1.8
CCDC7-209ENST00000539197 UMODL1Q5DID0 1318 aa3.77□□□□□ -1.81
CCDC7-209ENST00000539197 K7EQD1 137 aa3.77□□□□□ -1.81
CCDC7-209ENST00000539197 USO1O60763 962 aaKnown RBP3.77□□□□□ -1.81
CCDC7-209ENST00000539197 PNLIPRP2P54317 469 aa3.77□□□□□ -1.81
CCDC7-209ENST00000539197 SPECC1Q5M775 1068 aa3.77□□□□□ -1.81
CCDC7-209ENST00000539197 OLFML2AQ68BL7 652 aa3.77□□□□□ -1.81
CCDC7-209ENST00000539197 CCDC70Q6NSX1 233 aa3.77□□□□□ -1.81
CCDC7-209ENST00000539197 REG3GQ6UW15 175 aa3.77□□□□□ -1.81
CCDC7-209ENST00000539197 CD177Q8N6Q3 437 aa3.77□□□□□ -1.81
CCDC7-209ENST00000539197 THAP8Q8NA92 274 aa3.77□□□□□ -1.81
CCDC7-209ENST00000539197 THOC1Q96FV9 657 aaKnown RBP3.77□□□□□ -1.81
CCDC7-209ENST00000539197 SERAC1Q96JX3 654 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms