RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 KRTAP5-8O75690 187 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 ATP6AP2O75787 350 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 NDUFB8O95169 186 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 VNN2O95498 520 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 GGPS1O95749 300 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 RAF1P04049 648 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 HCKP08631 526 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 MYOD1P15172 320 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 SELEP16581 610 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 PSMA2P25787 234 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 LOXP28300 417 aaPredicted RBP0.98□□□□□ -2.25
HIF1A-204ENST00000539097 AVPR1AP37288 418 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 PGFP49763 221 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 BMXP51813 675 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 RBPJQ06330 500 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 CACNG1Q06432 222 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 IFT88Q13099 833 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 DUOXA1Q1HG43 343 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 AARDQ4LEZ3 155 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 ANKRD20A4Q4UJ75 823 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 LRRC23Q53EV4 343 aaPredicted RBP0.98□□□□□ -2.25
HIF1A-204ENST00000539097 ANKRD20A8PQ5CZ79 823 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 ANKRD20A2Q5SQ80 823 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 ANKRD20A1Q5TYW2 823 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 ANKRD20A3Q5VUR7 823 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 LYSMD4Q5XG99 296 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 FAM91A1Q658Y4 838 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 C11orf63Q6NUN7 778 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 PODNL1Q6PEZ8 512 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 SLC36A4Q6YBV0 504 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 TMEM64Q6YI46 380 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 RCOR2Q8IZ40 523 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 OR8H3Q8N146 312 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 ZNF114Q8NC26 417 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 HM13Q8TCT9 377 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 GRK7Q8WTQ7 553 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 SLC20A1Q8WUM9 679 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 SLC38A5Q8WUX1 472 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 BCL2L2Q92843 193 aaPredicted RBP0.98□□□□□ -2.25
HIF1A-204ENST00000539097 SPATA33Q96N06 139 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 SORCS2Q96PQ0 1159 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 CDCA3Q99618 268 aaPredicted RBP0.98□□□□□ -2.25
HIF1A-204ENST00000539097 TMEM204Q9BSN7 226 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 TBCDQ9BTW9 1192 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 WWTR1Q9GZV5 400 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 MED20Q9H944 212 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 GRPEL1Q9HAV7 217 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 SYTL2Q9HCH5 934 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 ZDHHC18Q9NUE0 388 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 TCP11L1Q9NUJ3 509 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 LARSQ9P2J5 1176 aaKnown RBP0.98□□□□□ -2.25
HIF1A-204ENST00000539097 ZDHHC2Q9UIJ5 367 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 U3KQV3 271 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 TDRD15B5MCY1 1934 aaKnown RBP0.98□□□□□ -2.25
HIF1A-204ENST00000539097 PRSS51A0A1B0GVH4 220 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 ELOVL7A1L3X0 281 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 TRIM64CA6NLI5 447 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 ENO4A6NNW6 628 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 KBTBD13C9JR72 458 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 TMEM178BH3BS89 294 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 ADAM12O43184 909 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 GLRA3O75311 464 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 SLU7O95391 586 aaKnown RBP0.98□□□□□ -2.25
HIF1A-204ENST00000539097 OLFM2O95897 454 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 IGHG3P01860 377 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 ATP5BP06576 529 aaKnown RBP0.98□□□□□ -2.25
HIF1A-204ENST00000539097 ZNF18P17022 549 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 DNAJB1P25685 340 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 CD151P48509 253 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 MXI1P50539 228 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 ARFIP1P53367 373 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 TAS2R38P59533 333 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 HSPA14Q0VDF9 509 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 COASYQ13057 564 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 PDZK1IP1Q13113 114 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 MSLNQ13421 630 aaPredicted RBP0.98□□□□□ -2.25
HIF1A-204ENST00000539097 VWC2Q2TAL6 325 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 FSCBQ5H9T9 825 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 LINC00242Q5T6M2 205 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 LCE1AQ5T7P2 110 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 ZNF626Q68DY1 528 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 SLC27A1Q6PCB7 646 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 IYDQ6PHW0 289 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 ZNF367Q7RTV3 350 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 NUP54Q7Z3B4 507 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 PEX26Q7Z412 305 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 SPATA19Q7Z5L4 167 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 LMNTD2Q8IXW0 634 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 SIX6OS1Q8N1H7 587 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 CRYBG2Q8N1P7 616 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 PGBD5Q8N414 524 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 NRACQ8N912 160 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 LMNTD1Q8N9Z9 388 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 MSANTD4Q8NCY6 345 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 OR4C5Q8NGB2 326 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 TMEM190Q8WZ59 177 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 PIGTQ969N2 578 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 VOPP1Q96AW1 172 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 ZNF558Q96NG5 402 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 TUBGCP2Q9BSJ2 902 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms