RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 CBX4O00257 560 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 CD3EAPO15446 510 aaKnown RBP8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 MED7O43513 233 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 CA12O43570 354 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 VPS4BO75351 444 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 OR56A5P0C7T3 313 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 CYP4B1P13584 511 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 MAPK1P28482 360 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 AVPR1AP37288 418 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 CLCN5P51795 746 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 BCAT1P54687 386 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 FGL2Q14314 439 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 RAB11FIP2Q7L804 512 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 EFHBQ8N7U6 833 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 OR1M1Q8NGA1 313 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 OR8D4Q8NGM9 314 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 HEXDCQ8WVB3 486 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 NXPE2Q96DL1 559 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 C11orf24Q96F05 449 aaPredicted RBP8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 WBP1Q96G27 269 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 ZDHHC12Q96GR4 267 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 DIRAS2Q96HU8 199 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 GPR78Q96P69 363 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 WDR18Q9BV38 432 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 ASPNQ9BXN1 380 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 GALNT9Q9HCQ5 603 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 ZFP64Q9NPA5 681 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 KMT5AQ9NQR1 393 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 PRDM9Q9NQV7 894 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 PLCXD1Q9NUJ7 323 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 TMOD3Q9NYL9 352 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 NCKAP1Q9Y2A7 1128 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 DICER1Q9UPY3 1922 aaKnown RBP8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 A0A087X1B8 175 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 A0A096LPI6 279 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 TRAV19A0A0A6YYK7 116 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 IGKV6D-41A0A0C4DH26 115 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 ZCWPW2A0A1B0GU75 182 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 TMEM82A0PJX8 343 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 GRXCR2A6NFK2 248 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 ASB14A6NK59 587 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 C9JVG2 144 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 M0R233 179 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 ITGB1P05556 798 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 ZNF806P0C7X5 589 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 GPD1P21695 349 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 C21orf33P30042 268 aaPredicted RBP8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 RORAP35398 523 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 BTG1P62324 171 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 YWHAHQ04917 246 aaPredicted RBP8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 EML3Q32P44 896 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 FAM76BQ5HYJ3 339 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 CLEC6AQ6EIG7 209 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 KRT74Q7RTS7 529 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 XYLT1Q86Y38 959 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 NT5DC4Q86YG4 428 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 C9orf43Q8TAL5 461 aaPredicted RBP8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 LRRN4Q8WUT4 740 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 NSMAFQ92636 917 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 FUBP1Q96AE4 644 aaKnown RBP8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 RAD51AP1Q96B01 352 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 CREB3L1Q96BA8 519 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 COQ10AQ96MF6 247 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 CCDC115Q96NT0 180 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 BBS4Q96RK4 519 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 RAD9AQ99638 391 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 ADPGKQ9BRR6 497 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 HTATIP2Q9BUP3 242 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 ZCCHC4Q9H5U6 513 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 MAGIXQ9H6Y5 334 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 GAREM1Q9H706 876 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 TNFRSF12AQ9NP84 129 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 SLC52A3Q9NQ40 469 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 MIOSQ9NXC5 875 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 HCN3Q9P1Z3 774 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 PSORS1C1Q9UIG5 152 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 TSR3Q9UJK0 312 aaKnown RBP8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 ZNF112Q9UJU3 913 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 ENTPD4Q9Y227 616 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 RNF215Q9Y6U7 377 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 TRABD2BA6NFA1 517 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 CHP2O43745 196 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 LZTS3O60299 673 aaPredicted RBP8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 MITFO75030 526 aaPredicted RBP8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 GPX5O75715 221 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 RASGRP1O95267 797 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 SERPINA1P01009 418 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 S100A8P05109 93 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 H2AFB1P0C5Y9 115 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 H2AFB2P0C5Z0 115 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 CPB1P15086 417 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 BAG6P46379 1132 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 PPP1R8Q12972 351 aaKnown RBP8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 NKX1-1Q15270 411 aaPredicted RBP8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 C4orf46Q504U0 113 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 PAGE3Q5JUK9 113 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 FAM102BQ5T8I3 360 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 MLIPQ5VWP3 458 aa8.3□□□□□ -1.08
SRGAP1-202ENST00000537556 SCYL2Q6P3W7 929 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms