RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 SLC17A6Q9P2U8 582 aa16.49■□□□□ 0.23
SFSWAP-205ENST00000537164 DHCR7Q9UBM7 475 aaKnown RBP16.49■□□□□ 0.23
SFSWAP-205ENST00000537164 MED13Q9UHV7 2174 aa16.48■□□□□ 0.23
SFSWAP-205ENST00000537164 IGKV1-8A0A0C4DH67 115 aa16.48■□□□□ 0.23
SFSWAP-205ENST00000537164 C9J4A7 227 aa16.48■□□□□ 0.23
SFSWAP-205ENST00000537164 EIF3HO15372 352 aaKnown RBP eCLIP16.48■□□□□ 0.232e-8■■□□□ 11.9
SFSWAP-205ENST00000537164 SLC16A5O15375 505 aa16.48■□□□□ 0.23
SFSWAP-205ENST00000537164 TSPAN12O95859 305 aa16.48■□□□□ 0.23
SFSWAP-205ENST00000537164 C8GP07360 202 aa16.48■□□□□ 0.23
SFSWAP-205ENST00000537164 FDXRP22570 491 aa16.48■□□□□ 0.23
SFSWAP-205ENST00000537164 YBX1P67809 324 aaKnown RBP16.48■□□□□ 0.23
SFSWAP-205ENST00000537164 DCDP81605 110 aaKnown RBP16.48■□□□□ 0.23
SFSWAP-205ENST00000537164 MGAT5Q09328 741 aa16.48■□□□□ 0.23
SFSWAP-205ENST00000537164 CALCOCO2Q13137 446 aa16.48■□□□□ 0.23
SFSWAP-205ENST00000537164 ZNF425Q6IV72 752 aa16.48■□□□□ 0.23
SFSWAP-205ENST00000537164 MRPL14Q6P1L8 145 aaKnown RBP16.48■□□□□ 0.23
SFSWAP-205ENST00000537164 SUSD1Q6UWL2 747 aa16.48■□□□□ 0.23
SFSWAP-205ENST00000537164 UBE2R2Q712K3 238 aaPredicted RBP16.48■□□□□ 0.23
SFSWAP-205ENST00000537164 ZNF605Q86T29 641 aa16.48■□□□□ 0.23
SFSWAP-205ENST00000537164 SLC26A11Q86WA9 606 aa16.48■□□□□ 0.23
SFSWAP-205ENST00000537164 ANKMY2Q8IV38 441 aa16.48■□□□□ 0.23
SFSWAP-205ENST00000537164 MCMBPQ9BTE3 642 aa16.48■□□□□ 0.23
SFSWAP-205ENST00000537164 DPH7Q9BTV6 452 aa16.48■□□□□ 0.23
SFSWAP-205ENST00000537164 SLC6A20Q9NP91 592 aa16.48■□□□□ 0.23
SFSWAP-205ENST00000537164 TXLNGQ9NUQ3 528 aa16.48■□□□□ 0.23
SFSWAP-205ENST00000537164 SNX7Q9UNH6 387 aa16.48■□□□□ 0.23
SFSWAP-205ENST00000537164 VWA7Q9Y334 891 aa16.48■□□□□ 0.23
SFSWAP-205ENST00000537164 UBR5O95071 2799 aaPredicted RBP16.47■□□□□ 0.23
SFSWAP-205ENST00000537164 A0A1B0GX78 115 aa16.47■□□□□ 0.23
SFSWAP-205ENST00000537164 IMPA1P29218 277 aa16.47■□□□□ 0.23
SFSWAP-205ENST00000537164 RPA3P35244 121 aaPredicted RBP16.47■□□□□ 0.23
SFSWAP-205ENST00000537164 ABATP80404 500 aa16.47■□□□□ 0.23
SFSWAP-205ENST00000537164 MRPS25P82663 173 aaKnown RBP16.47■□□□□ 0.23
SFSWAP-205ENST00000537164 NFKB2Q00653 900 aa16.47■□□□□ 0.23
SFSWAP-205ENST00000537164 C2orf54Q08AI8 447 aa16.47■□□□□ 0.23
SFSWAP-205ENST00000537164 ILF2Q12905 390 aaKnown RBP16.47■□□□□ 0.23
SFSWAP-205ENST00000537164 NFATC3Q12968 1075 aa16.47■□□□□ 0.23
SFSWAP-205ENST00000537164 GRM7Q14831 915 aa16.47■□□□□ 0.23
SFSWAP-205ENST00000537164 NKAIN1Q4KMZ8 207 aa16.47■□□□□ 0.23
SFSWAP-205ENST00000537164 HECTD2Q5U5R9 776 aa16.47■□□□□ 0.23
SFSWAP-205ENST00000537164 ICE2Q659A1 982 aa16.47■□□□□ 0.23
SFSWAP-205ENST00000537164 FAM45BPQ6NSW5 357 aa16.47■□□□□ 0.23
SFSWAP-205ENST00000537164 FBXO42Q6P3S6 717 aa16.47■□□□□ 0.23
SFSWAP-205ENST00000537164 CYS1Q717R9 158 aa16.47■□□□□ 0.23
SFSWAP-205ENST00000537164 PAQR7Q86WK9 346 aa16.47■□□□□ 0.23
SFSWAP-205ENST00000537164 ZBED8Q8IZ13 594 aa16.47■□□□□ 0.23
SFSWAP-205ENST00000537164 FAM45AQ8TCE6 357 aa16.47■□□□□ 0.23
SFSWAP-205ENST00000537164 MCOLN3Q8TDD5 553 aa16.47■□□□□ 0.23
SFSWAP-205ENST00000537164 ABHD17AQ96GS6 310 aa16.47■□□□□ 0.23
SFSWAP-205ENST00000537164 PDLIM5Q96HC4 596 aaKnown RBP16.47■□□□□ 0.23
SFSWAP-205ENST00000537164 CCDC138Q96M89 665 aa16.47■□□□□ 0.23
SFSWAP-205ENST00000537164 ZFYVE21Q9BQ24 234 aa16.47■□□□□ 0.23
SFSWAP-205ENST00000537164 SELENOSQ9BQE4 189 aa16.47■□□□□ 0.23
SFSWAP-205ENST00000537164 PLCD4Q9BRC7 762 aa16.47■□□□□ 0.23
SFSWAP-205ENST00000537164 ACAT2Q9BWD1 397 aa16.47■□□□□ 0.23
SFSWAP-205ENST00000537164 PARVBQ9HBI1 364 aa16.47■□□□□ 0.23
SFSWAP-205ENST00000537164 MRPS30Q9NP92 439 aaKnown RBP16.47■□□□□ 0.23
SFSWAP-205ENST00000537164 ZFATQ9P243 1243 aa16.47■□□□□ 0.23
SFSWAP-205ENST00000537164 ADAMTS6Q9UKP5 1117 aa16.47■□□□□ 0.23
SFSWAP-205ENST00000537164 PDE10AQ9Y233 779 aa16.47■□□□□ 0.23
SFSWAP-205ENST00000537164 MAN2B2Q9Y2E5 1009 aa16.47■□□□□ 0.23
SFSWAP-205ENST00000537164 PADI2Q9Y2J8 665 aa16.47■□□□□ 0.23
SFSWAP-205ENST00000537164 PSAT1Q9Y617 370 aa16.47■□□□□ 0.23
SFSWAP-205ENST00000537164 PRRC2CQ9Y520 2896 aaKnown RBP16.47■□□□□ 0.23
SFSWAP-205ENST00000537164 DSCR3O14972 297 aa16.46■□□□□ 0.23
SFSWAP-205ENST00000537164 NRP2O60462 931 aa16.46■□□□□ 0.23
SFSWAP-205ENST00000537164 CCNDBP1O95273 360 aa16.46■□□□□ 0.23
SFSWAP-205ENST00000537164 PLA2G2AP14555 144 aa16.46■□□□□ 0.23
SFSWAP-205ENST00000537164 ITGAXP20702 1163 aa16.46■□□□□ 0.23
SFSWAP-205ENST00000537164 EMP3P54852 163 aa16.46■□□□□ 0.23
SFSWAP-205ENST00000537164 IL2P60568 153 aa16.46■□□□□ 0.23
SFSWAP-205ENST00000537164 FAM214AQ32MH5 1076 aa16.46■□□□□ 0.23
SFSWAP-205ENST00000537164 C1orf189Q5VU69 101 aa16.46■□□□□ 0.23
SFSWAP-205ENST00000537164 FRMPD2BQ6IN97 320 aa16.46■□□□□ 0.23
SFSWAP-205ENST00000537164 ZC3HC1Q86WB0 502 aaKnown RBP16.46■□□□□ 0.23
SFSWAP-205ENST00000537164 MYO1HQ8N1T3 1032 aa16.46■□□□□ 0.23
SFSWAP-205ENST00000537164 PPFIBP2Q8ND30 876 aa16.46■□□□□ 0.23
SFSWAP-205ENST00000537164 C9orf43Q8TAL5 461 aaPredicted RBP16.46■□□□□ 0.23
SFSWAP-205ENST00000537164 FKBP10Q96AY3 582 aa16.46■□□□□ 0.23
SFSWAP-205ENST00000537164 OLFM1Q99784 485 aa16.46■□□□□ 0.23
SFSWAP-205ENST00000537164 DPH5Q9H2P9 285 aa16.46■□□□□ 0.23
SFSWAP-205ENST00000537164 SLC22A11Q9NSA0 550 aa16.46■□□□□ 0.23
SFSWAP-205ENST00000537164 CUTCQ9NTM9 273 aa16.46■□□□□ 0.23
SFSWAP-205ENST00000537164 NSMCE4AQ9NXX6 385 aa16.46■□□□□ 0.23
SFSWAP-205ENST00000537164 STOX2Q9P2F5 926 aaPredicted RBP16.46■□□□□ 0.23
SFSWAP-205ENST00000537164 TAC3Q9UHF0 121 aa16.46■□□□□ 0.23
SFSWAP-205ENST00000537164 UTP11Q9Y3A2 253 aaKnown RBP16.46■□□□□ 0.23
SFSWAP-205ENST00000537164 NUP210LQ5VU65 1888 aa16.46■□□□□ 0.22
SFSWAP-205ENST00000537164 PCSK5Q92824 1860 aa16.46■□□□□ 0.22
SFSWAP-205ENST00000537164 SPENQ96T58 3664 aaKnown RBP16.45■□□□□ 0.22
SFSWAP-205ENST00000537164 LOC105369274A0A096LPK9 316 aa16.45■□□□□ 0.22
SFSWAP-205ENST00000537164 LOC102723532A0A0G2JNH3 316 aa16.45■□□□□ 0.22
SFSWAP-205ENST00000537164 RFPL1O75677 317 aa16.45■□□□□ 0.22
SFSWAP-205ENST00000537164 SYF2O95926 243 aaKnown RBP16.45■□□□□ 0.22
SFSWAP-205ENST00000537164 ALBP02768 609 aa16.45■□□□□ 0.22
SFSWAP-205ENST00000537164 EZRP15311 586 aaKnown RBP16.45■□□□□ 0.22
SFSWAP-205ENST00000537164 CAV1Q03135 178 aa16.45■□□□□ 0.22
SFSWAP-205ENST00000537164 PDAP1Q13442 181 aaKnown RBP16.45■□□□□ 0.22
SFSWAP-205ENST00000537164 WASHC2DQ5SRD0 308 aa16.45■□□□□ 0.22
SFSWAP-205ENST00000537164 TCTN3Q6NUS6 607 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms