RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 LPAR4Q99677 370 aa3.46□□□□□ -1.86
VBP1-203ENST00000535916 PARLQ9H300 379 aa3.46□□□□□ -1.86
VBP1-203ENST00000535916 KRT84Q9NSB2 600 aa3.46□□□□□ -1.86
VBP1-203ENST00000535916 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.46□□□□□ -1.86
VBP1-203ENST00000535916 SEPT11Q9NVA2 429 aaKnown RBP3.46□□□□□ -1.86
VBP1-203ENST00000535916 TSPAN16Q9UKR8 245 aa3.46□□□□□ -1.86
VBP1-203ENST00000535916 IGHV4-30-2A0A087WSY4 118 aa3.45□□□□□ -1.86
VBP1-203ENST00000535916 J3KRW8 73 aa3.45□□□□□ -1.86
VBP1-203ENST00000535916 TEX28O15482 410 aa3.45□□□□□ -1.86
VBP1-203ENST00000535916 EPB41L2O43491 1005 aaKnown RBP3.45□□□□□ -1.86
VBP1-203ENST00000535916 TSPAN1O60635 241 aa3.45□□□□□ -1.86
VBP1-203ENST00000535916 CEACAM4O75871 244 aa3.45□□□□□ -1.86
VBP1-203ENST00000535916 HADHAP40939 763 aa3.45□□□□□ -1.86
VBP1-203ENST00000535916 SOX3P41225 446 aa3.45□□□□□ -1.86
VBP1-203ENST00000535916 MPP1Q00013 466 aa3.45□□□□□ -1.86
VBP1-203ENST00000535916 TAB1Q15750 504 aa3.45□□□□□ -1.86
VBP1-203ENST00000535916 FAM189A2Q15884 450 aa3.45□□□□□ -1.86
VBP1-203ENST00000535916 UGT3A2Q3SY77 523 aa3.45□□□□□ -1.86
VBP1-203ENST00000535916 SYT14P1Q58G82 188 aa3.45□□□□□ -1.86
VBP1-203ENST00000535916 FAM166AQ6J272 317 aa3.45□□□□□ -1.86
VBP1-203ENST00000535916 LCLAT1Q6UWP7 414 aa3.45□□□□□ -1.86
VBP1-203ENST00000535916 VITQ6UXI7 678 aa3.45□□□□□ -1.86
VBP1-203ENST00000535916 CDHR3Q6ZTQ4 885 aa3.45□□□□□ -1.86
VBP1-203ENST00000535916 Q6ZVH6 145 aa3.45□□□□□ -1.86
VBP1-203ENST00000535916 FGFRL1Q8N441 504 aa3.45□□□□□ -1.86
VBP1-203ENST00000535916 KLHDC1Q8N7A1 406 aa3.45□□□□□ -1.86
VBP1-203ENST00000535916 C4orf45Q96LM5 186 aa3.45□□□□□ -1.86
VBP1-203ENST00000535916 CHCHD5Q9BSY4 110 aa3.45□□□□□ -1.86
VBP1-203ENST00000535916 NYXQ9GZU5 481 aa3.45□□□□□ -1.86
VBP1-203ENST00000535916 OLA1Q9NTK5 396 aaKnown RBP3.45□□□□□ -1.86
VBP1-203ENST00000535916 ZNF840PA6NDX5 716 aa3.44□□□□□ -1.86
VBP1-203ENST00000535916 G3V2L1 256 aa3.44□□□□□ -1.86
VBP1-203ENST00000535916 TIMM44O43615 452 aa3.44□□□□□ -1.86
VBP1-203ENST00000535916 PNLIPRP2P54317 469 aa3.44□□□□□ -1.86
VBP1-203ENST00000535916 DHRS7BQ6IAN0 325 aaPredicted RBP3.44□□□□□ -1.86
VBP1-203ENST00000535916 C1orf122Q6ZSJ8 110 aa3.44□□□□□ -1.86
VBP1-203ENST00000535916 CHMP1BQ7LBR1 199 aa3.44□□□□□ -1.86
VBP1-203ENST00000535916 ZER1Q7Z7L7 766 aa3.44□□□□□ -1.86
VBP1-203ENST00000535916 TMEM173Q86WV6 379 aaPredicted RBP3.44□□□□□ -1.86
VBP1-203ENST00000535916 PIGBQ92521 554 aa3.44□□□□□ -1.86
VBP1-203ENST00000535916 SAT2Q96F10 170 aaPredicted RBP3.44□□□□□ -1.86
VBP1-203ENST00000535916 CNOT6LQ96LI5 555 aaKnown RBP3.44□□□□□ -1.86
VBP1-203ENST00000535916 TRPV4Q9HBA0 871 aa3.44□□□□□ -1.86
VBP1-203ENST00000535916 ARHGEF38Q9NXL2 777 aa3.44□□□□□ -1.86
VBP1-203ENST00000535916 B4GALT7Q9UBV7 327 aa3.44□□□□□ -1.86
VBP1-203ENST00000535916 TMED3Q9Y3Q3 217 aa3.44□□□□□ -1.86
VBP1-203ENST00000535916 ZNF644Q9H582 1327 aaPredicted RBP3.44□□□□□ -1.86
VBP1-203ENST00000535916 CD4P01730 458 aa3.43□□□□□ -1.86
VBP1-203ENST00000535916 PRKAR1AP10644 381 aa3.43□□□□□ -1.86
VBP1-203ENST00000535916 HAPLN1P10915 354 aaPredicted RBP3.43□□□□□ -1.86
VBP1-203ENST00000535916 POU5F1Q01860 360 aaKnown RBP3.43□□□□□ -1.86
VBP1-203ENST00000535916 AIMP2Q13155 320 aaKnown RBP3.43□□□□□ -1.86
VBP1-203ENST00000535916 TMEM132DQ14C87 1099 aa3.43□□□□□ -1.86
VBP1-203ENST00000535916 RNASEH2BQ5TBB1 312 aaKnown RBP3.43□□□□□ -1.86
VBP1-203ENST00000535916 C11orf63Q6NUN7 778 aa3.43□□□□□ -1.86
VBP1-203ENST00000535916 CFAP161Q6P656 301 aa3.43□□□□□ -1.86
VBP1-203ENST00000535916 MAATS1Q7Z4T9 603 aa3.43□□□□□ -1.86
VBP1-203ENST00000535916 ARHGAP22Q7Z5H3 698 aa3.43□□□□□ -1.86
VBP1-203ENST00000535916 ADCK1Q86TW2 530 aa3.43□□□□□ -1.86
VBP1-203ENST00000535916 MMD2Q8IY49 270 aa3.43□□□□□ -1.86
VBP1-203ENST00000535916 TTC39CQ8N584 583 aa3.43□□□□□ -1.86
VBP1-203ENST00000535916 CCDC89Q8N998 374 aa3.43□□□□□ -1.86
VBP1-203ENST00000535916 C9orf43Q8TAL5 461 aaPredicted RBP3.43□□□□□ -1.86
VBP1-203ENST00000535916 SNRNP27Q8WVK2 155 aaKnown RBP3.43□□□□□ -1.86
VBP1-203ENST00000535916 CCDC34Q96HJ3 373 aa3.43□□□□□ -1.86
VBP1-203ENST00000535916 C2orf48Q96LS8 159 aa3.43□□□□□ -1.86
VBP1-203ENST00000535916 CDRT15Q96T59 188 aa3.43□□□□□ -1.86
VBP1-203ENST00000535916 WNT5BQ9H1J7 359 aa3.43□□□□□ -1.86
VBP1-203ENST00000535916 UNC45AQ9H3U1 944 aa3.43□□□□□ -1.86
VBP1-203ENST00000535916 SMARCAD1Q9H4L7 1026 aa3.43□□□□□ -1.86
VBP1-203ENST00000535916 WSB2Q9NYS7 404 aaPredicted RBP3.43□□□□□ -1.86
VBP1-203ENST00000535916 GTSE1Q9NYZ3 720 aa3.43□□□□□ -1.86
VBP1-203ENST00000535916 CLIC5Q9NZA1 410 aa3.43□□□□□ -1.86
VBP1-203ENST00000535916 R4GN57 208 aa3.43□□□□□ -1.86
VBP1-203ENST00000535916 MEIS2O14770 477 aa3.42□□□□□ -1.86
VBP1-203ENST00000535916 GJA1P17302 382 aa3.42□□□□□ -1.86
VBP1-203ENST00000535916 KLK2P20151 261 aa3.42□□□□□ -1.86
VBP1-203ENST00000535916 SLC15A1P46059 708 aa3.42□□□□□ -1.86
VBP1-203ENST00000535916 C3AR1Q16581 482 aa3.42□□□□□ -1.86
VBP1-203ENST00000535916 MS4A18Q3C1V0 323 aa3.42□□□□□ -1.86
VBP1-203ENST00000535916 MZT2BQ6NZ67 158 aa3.42□□□□□ -1.86
VBP1-203ENST00000535916 C16orf54Q6UWD8 224 aa3.42□□□□□ -1.86
VBP1-203ENST00000535916 PHC2Q8IXK0 858 aa3.42□□□□□ -1.86
VBP1-203ENST00000535916 ZBED8Q8IZ13 594 aa3.42□□□□□ -1.86
VBP1-203ENST00000535916 FAM9BQ8IZU0 186 aa3.42□□□□□ -1.86
VBP1-203ENST00000535916 OR5T2Q8NGG2 359 aa3.42□□□□□ -1.86
VBP1-203ENST00000535916 MS4A10Q96PG2 267 aa3.42□□□□□ -1.86
VBP1-203ENST00000535916 PSMB7Q99436 277 aa3.42□□□□□ -1.86
VBP1-203ENST00000535916 PAFAH2Q99487 392 aa3.42□□□□□ -1.86
VBP1-203ENST00000535916 CCDC3Q9BQI4 270 aa3.42□□□□□ -1.86
VBP1-203ENST00000535916 SLITRK2Q9H156 845 aa3.42□□□□□ -1.86
VBP1-203ENST00000535916 TNFRSF19Q9NS68 423 aa3.42□□□□□ -1.86
VBP1-203ENST00000535916 FBXO2Q9UK22 296 aaPredicted RBP3.42□□□□□ -1.86
VBP1-203ENST00000535916 ITIH6Q6UXX5 1313 aa3.42□□□□□ -1.86
VBP1-203ENST00000535916 A0A087WWV3 80 aa3.41□□□□□ -1.86
VBP1-203ENST00000535916 A0A087X0M5 115 aa3.41□□□□□ -1.86
VBP1-203ENST00000535916 A0A1B0GX30 115 aa3.41□□□□□ -1.86
VBP1-203ENST00000535916 PI4KAP2A4QPH2 592 aa3.41□□□□□ -1.86
VBP1-203ENST00000535916 NPIPB9F8W1W9 429 aa3.41□□□□□ -1.86
VBP1-203ENST00000535916 USO1O60763 962 aaKnown RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms