RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 DOCK5Q9H7D0 1870 aa6.45□□□□□ -1.38
USP28-202ENST00000535607 A0A1B0GTW7 788 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 A0A1W2PRX2 142 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 CCDC154A6NI56 674 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 CENPXA8MT69 81 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.44□□□□□ -1.38
USP28-202ENST00000535607 LOC110117498-PIK3R3F6TDL0 507 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 PSMD11O00231 422 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 PLOD2O00469 737 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 ARPC2O15144 300 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 ARHGEF9O43307 516 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 UPK1BO75841 260 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 CCNKO75909 580 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 IPO13O94829 963 aaKnown RBP6.44□□□□□ -1.38
USP28-202ENST00000535607 GABARAPO95166 117 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 MATN4O95460 622 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 CHRNA1P02708 482 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 LGALS2P05162 132 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 GNAO1P09471 354 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 RAP2AP10114 183 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 BMP7P18075 431 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 M6PRP20645 277 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 CRHBPP24387 322 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 HTR1EP28566 365 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 ARHGDIAP52565 204 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 CHRNB3Q05901 458 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.44□□□□□ -1.38
USP28-202ENST00000535607 MGAT2Q10469 447 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 SELENBP1Q13228 472 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 TYSND1Q2T9J0 566 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 ZNF362Q5T0B9 420 aaPredicted RBP6.44□□□□□ -1.38
USP28-202ENST00000535607 RSBN1Q5VWQ0 802 aaPredicted RBP6.44□□□□□ -1.38
USP28-202ENST00000535607 TMEM198Q66K66 360 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 JADE1Q6IE81 842 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 TRMT1LQ7Z2T5 733 aaKnown RBP6.44□□□□□ -1.38
USP28-202ENST00000535607 CTU1Q7Z7A3 348 aaKnown RBP6.44□□□□□ -1.38
USP28-202ENST00000535607 SLC22A16Q86VW1 577 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 P2RY8Q86VZ1 359 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 ZC3HC1Q86WB0 502 aaKnown RBP6.44□□□□□ -1.38
USP28-202ENST00000535607 ADGRG5Q8IZF4 528 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 SLC7A5P1Q8MH63 180 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 CLYBLQ8N0X4 340 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 SPARTQ8N0X7 666 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 AMER2Q8N7J2 671 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 ASCC1Q8N9N2 400 aaKnown RBP6.44□□□□□ -1.38
USP28-202ENST00000535607 TP53I13Q8NBR0 393 aaPredicted RBP6.44□□□□□ -1.38
USP28-202ENST00000535607 PPHLN1Q8NEY8 458 aaKnown RBP6.44□□□□□ -1.38
USP28-202ENST00000535607 ARNTL2Q8WYA1 636 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 PIK3R3Q92569 461 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 PROX1Q92786 737 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 HDAC11Q96DB2 347 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 FBXL20Q96IG2 436 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 ELMO2Q96JJ3 720 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 NSMCE2Q96MF7 247 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 CSPG4P5Q96PW8 444 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 FEM1AQ9BSK4 669 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 POMKQ9H5K3 350 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 ASB7Q9H672 318 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 NEK6Q9HC98 313 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 TM9SF3Q9HD45 589 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 PDGFCQ9NRA1 345 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 IARS2Q9NSE4 1012 aaKnown RBP6.44□□□□□ -1.38
USP28-202ENST00000535607 TDP1Q9NUW8 608 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 TMEM140Q9NV12 185 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 SEPT10Q9P0V9 454 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.44□□□□□ -1.38
USP28-202ENST00000535607 XPR1Q9UBH6 696 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 LEF1Q9UJU2 399 aaPredicted RBP6.44□□□□□ -1.38
USP28-202ENST00000535607 EIF3LQ9Y262 564 aaKnown RBP6.44□□□□□ -1.38
USP28-202ENST00000535607 AAR2Q9Y312 384 aaKnown RBP6.44□□□□□ -1.38
USP28-202ENST00000535607 NOX1Q9Y5S8 564 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 PSAT1Q9Y617 370 aa6.44□□□□□ -1.38
USP28-202ENST00000535607 A0A0J9YYE9 177 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.43□□□□□ -1.38
USP28-202ENST00000535607 TMEM150BA6NC51 233 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 C2orf78A6NCI8 922 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 PDZK1P1A8MUH7 402 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 TTC34A8MYJ7 566 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 G3V2T6 193 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 NR5A2O00482 541 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 GNGT2O14610 69 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 HBP1O60381 514 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 NOBOXO60393 691 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 FOXD2O60548 495 aaPredicted RBP6.43□□□□□ -1.38
USP28-202ENST00000535607 CDC14BO60729 498 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 TMEM127O75204 238 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 JRKO75564 520 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 CRCPO75575 148 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 SOAT2O75908 522 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 ANXA9O76027 345 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 STBD1O95210 358 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 SNX4O95219 450 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 GASTP01350 101 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 PRKCBP05771 671 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 TRAPPC2P0DI81 140 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 TRAPPC2BP0DI82 140 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 LBPP18428 481 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 ATP6V1B2P21281 511 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 SAT1P21673 171 aa6.43□□□□□ -1.38
USP28-202ENST00000535607 TCEA1P23193 301 aaKnown RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms