RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 CDKL4Q5MAI5 379 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 C16orf46Q6P387 395 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 CROCCP3Q8IVE0 287 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 NAGSQ8N159 534 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 FBXW8Q8N3Y1 598 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 SFRP1Q8N474 314 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 ADCY4Q8NFM4 1077 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 SLC26A7Q8TE54 656 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 ZDHHC1Q8WTX9 485 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 ZFPM2Q8WW38 1151 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 CLPTM1LQ96KA5 538 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 SERPINI1Q99574 410 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 UNKQ9C0B0 810 aaKnown RBP11.93□□□□□ -0.5
SCARB1-204ENST00000535005 RBM38Q9H0Z9 239 aaKnown RBP11.93□□□□□ -0.5
SCARB1-204ENST00000535005 C12orf65Q9H3J6 166 aaKnown RBP11.93□□□□□ -0.5
SCARB1-204ENST00000535005 ALG9Q9H6U8 611 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 IL21RQ9HBE5 538 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 ZNF624Q9P2J8 865 aaPredicted RBP11.93□□□□□ -0.5
SCARB1-204ENST00000535005 DOLKQ9UPQ8 538 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 ASF1AQ9Y294 204 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 OARD1Q9Y530 152 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 PCDHGB2Q9Y5G2 931 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 ZFC3H1O60293 1989 aaKnown RBP11.93□□□□□ -0.5
SCARB1-204ENST00000535005 LNP1A1A4G5 178 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 ARHGEF33A8MVX0 844 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 CYP2A7P20853 494 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 PEX2P28328 305 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 SLC19A1P41440 591 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 GLRBP48167 497 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 NR1H2P55055 460 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 MTTPP55157 894 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 AP1S2P56377 157 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 UBE2IP63279 158 aaKnown RBP11.93□□□□□ -0.5
SCARB1-204ENST00000535005 CDKL1Q00532 357 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 TBL3Q12788 808 aaKnown RBP11.93□□□□□ -0.5
SCARB1-204ENST00000535005 CSRP2Q16527 193 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 METTL21CQ5VZV1 264 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 TCEAL6Q6IPX3 200 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 SATL1Q86VE3 508 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 GPSM1Q86YR5 675 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 DCUN1D3Q8IWE4 304 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 PQLC1Q8N2U9 271 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 AVL9Q8NBF6 648 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 OR5K2Q8NHB8 316 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 RDH11Q8TC12 318 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 MCOLN3Q8TDD5 553 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 PPP4R1Q8TF05 950 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 TCEAL3Q969E4 200 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 SCYL1Q96KG9 808 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 HAUS8Q9BT25 410 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 TRIM54Q9BYV2 358 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 TRIT1Q9H3H1 467 aaKnown RBP11.93□□□□□ -0.5
SCARB1-204ENST00000535005 NLGN3Q9NZ94 848 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 XPR1Q9UBH6 696 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 POLG2Q9UHN1 485 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 TSR3Q9UJK0 312 aaKnown RBP11.93□□□□□ -0.5
SCARB1-204ENST00000535005 CNOT11Q9UKZ1 510 aaKnown RBP11.93□□□□□ -0.5
SCARB1-204ENST00000535005 RNF112Q9ULX5 631 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 PDE10AQ9Y233 779 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 COLEC10Q9Y6Z7 277 aa11.93□□□□□ -0.5
SCARB1-204ENST00000535005 TDRD6O60522 2096 aaKnown RBP11.93□□□□□ -0.5
SCARB1-204ENST00000535005 TMEM131Q92545 1883 aa11.92□□□□□ -0.5
SCARB1-204ENST00000535005 OR52A4PA6NMU1 304 aa11.92□□□□□ -0.5
SCARB1-204ENST00000535005 SYCE1LA8MT33 242 aa11.92□□□□□ -0.5
SCARB1-204ENST00000535005 KLK8O60259 260 aa11.92□□□□□ -0.5
SCARB1-204ENST00000535005 NOBOXO60393 691 aa11.92□□□□□ -0.5
SCARB1-204ENST00000535005 FOXD2O60548 495 aaPredicted RBP11.92□□□□□ -0.5
SCARB1-204ENST00000535005 PFDN1O60925 122 aa11.92□□□□□ -0.5
SCARB1-204ENST00000535005 SERPINE1P05121 402 aa11.92□□□□□ -0.5
SCARB1-204ENST00000535005 MTHFD2P13995 350 aa11.92□□□□□ -0.5
SCARB1-204ENST00000535005 HK2P52789 917 aa11.92□□□□□ -0.5
SCARB1-204ENST00000535005 ATXN3P54252 364 aaPredicted RBP11.92□□□□□ -0.5
SCARB1-204ENST00000535005 TGFBIQ15582 683 aa11.92□□□□□ -0.5
SCARB1-204ENST00000535005 PHKG1Q16816 387 aa11.92□□□□□ -0.5
SCARB1-204ENST00000535005 C6orf132Q5T0Z8 1188 aa11.92□□□□□ -0.5
SCARB1-204ENST00000535005 TTC23LQ6PF05 361 aa11.92□□□□□ -0.5
SCARB1-204ENST00000535005 DBX2Q6ZNG2 339 aa11.92□□□□□ -0.5
SCARB1-204ENST00000535005 MINDY1Q8N5J2 469 aa11.92□□□□□ -0.5
SCARB1-204ENST00000535005 GPR156Q8NFN8 814 aa11.92□□□□□ -0.5
SCARB1-204ENST00000535005 OR5AR1Q8NGP9 310 aa11.92□□□□□ -0.5
SCARB1-204ENST00000535005 PPP1R14CQ8TAE6 165 aa11.92□□□□□ -0.5
SCARB1-204ENST00000535005 SLC37A2Q8TED4 501 aa11.92□□□□□ -0.5
SCARB1-204ENST00000535005 PYDC1Q8WXC3 89 aa11.92□□□□□ -0.5
SCARB1-204ENST00000535005 RAD51AP1Q96B01 352 aa11.92□□□□□ -0.5
SCARB1-204ENST00000535005 FERD3LQ96RJ6 166 aa11.92□□□□□ -0.5
SCARB1-204ENST00000535005 RTKNQ9BST9 563 aa11.92□□□□□ -0.5
SCARB1-204ENST00000535005 DUSP23Q9BVJ7 150 aa11.92□□□□□ -0.5
SCARB1-204ENST00000535005 GTPBP2Q9BX10 602 aaKnown RBP11.92□□□□□ -0.5
SCARB1-204ENST00000535005 OCEL1Q9H607 264 aa11.92□□□□□ -0.5
SCARB1-204ENST00000535005 SEMA4GQ9NTN9 838 aa11.92□□□□□ -0.5
SCARB1-204ENST00000535005 POT1Q9NUX5 634 aa11.92□□□□□ -0.5
SCARB1-204ENST00000535005 IMP3Q9NV31 184 aaKnown RBP11.92□□□□□ -0.5
SCARB1-204ENST00000535005 NCDNQ9UBB6 729 aa11.92□□□□□ -0.5
SCARB1-204ENST00000535005 MID2Q9UJV3 735 aa11.92□□□□□ -0.5
SCARB1-204ENST00000535005 POMPQ9Y244 141 aa11.92□□□□□ -0.5
SCARB1-204ENST00000535005 HCN4Q9Y3Q4 1203 aa11.92□□□□□ -0.5
SCARB1-204ENST00000535005 ARHGEF17Q96PE2 2063 aaPredicted RBP11.91□□□□□ -0.5
SCARB1-204ENST00000535005 H3BNX3 289 aa11.91□□□□□ -0.5
SCARB1-204ENST00000535005 TK2O00142 265 aa11.91□□□□□ -0.5
SCARB1-204ENST00000535005 CAPNS1P04632 268 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms