RNA–Protein interactions for RNA: ENST00000534602.5

GSDMD-216, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 480 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-216ENST00000534602 ATP13A2Q9NQ11 1180 aa20.55■□□□□ 0.88
GSDMD-216ENST00000534602 VPS4AQ9UN37 437 aa20.55■□□□□ 0.88
GSDMD-216ENST00000534602 HYKKA2RU49 373 aa20.54■□□□□ 0.88
GSDMD-216ENST00000534602 ZSCAN12O43309 604 aa20.54■□□□□ 0.88
GSDMD-216ENST00000534602 IPO13O94829 963 aaKnown RBP20.54■□□□□ 0.88
GSDMD-216ENST00000534602 ENO3P13929 434 aaPredicted RBP20.54■□□□□ 0.88
GSDMD-216ENST00000534602 EMP3P54852 163 aa20.54■□□□□ 0.88
GSDMD-216ENST00000534602 CTBP1Q13363 440 aa20.54■□□□□ 0.88
GSDMD-216ENST00000534602 SLC6A19Q695T7 634 aa20.54■□□□□ 0.88
GSDMD-216ENST00000534602 FRMPD2BQ6IN97 320 aa20.54■□□□□ 0.88
GSDMD-216ENST00000534602 PRMT9Q6P2P2 845 aa20.54■□□□□ 0.88
GSDMD-216ENST00000534602 COX15Q7KZN9 410 aa20.54■□□□□ 0.88
GSDMD-216ENST00000534602 DENND6AQ8IWF6 608 aa20.54■□□□□ 0.88
GSDMD-216ENST00000534602 PPIL6Q8IXY8 311 aa20.54■□□□□ 0.88
GSDMD-216ENST00000534602 COG1Q8WTW3 980 aa20.54■□□□□ 0.88
GSDMD-216ENST00000534602 SPSB2Q99619 263 aa20.54■□□□□ 0.88
GSDMD-216ENST00000534602 ZFYVE21Q9BQ24 234 aa20.54■□□□□ 0.88
GSDMD-216ENST00000534602 DPH7Q9BTV6 452 aa20.54■□□□□ 0.88
GSDMD-216ENST00000534602 SLAMF7Q9NQ25 335 aa20.54■□□□□ 0.88
GSDMD-216ENST00000534602 TSR3Q9UJK0 312 aaKnown RBP20.54■□□□□ 0.88
GSDMD-216ENST00000534602 MED16Q9Y2X0 877 aa20.54■□□□□ 0.88
GSDMD-216ENST00000534602 A0A0J9YVX5 310 aa20.53■□□□□ 0.88
GSDMD-216ENST00000534602 VSTM2BA6NLU5 285 aa20.53■□□□□ 0.88
GSDMD-216ENST00000534602 KIF5CO60282 957 aa20.53■□□□□ 0.88
GSDMD-216ENST00000534602 MPC1LP0DKB6 136 aa20.53■□□□□ 0.88
GSDMD-216ENST00000534602 ATXN8OSP0DMR3 200 aa20.53■□□□□ 0.88
GSDMD-216ENST00000534602 RPA3P35244 121 aaPredicted RBP20.53■□□□□ 0.88
GSDMD-216ENST00000534602 RELAQ04206 551 aa20.53■□□□□ 0.88
GSDMD-216ENST00000534602 AIMP2Q13155 320 aaKnown RBP20.53■□□□□ 0.88
GSDMD-216ENST00000534602 FBXO42Q6P3S6 717 aa20.53■□□□□ 0.88
GSDMD-216ENST00000534602 ZNF549Q6P9A3 640 aa20.53■□□□□ 0.88
GSDMD-216ENST00000534602 AGGF1Q8N302 714 aaeCLIP20.53■□□□□ 0.88
GSDMD-216ENST00000534602 Q8NA96 180 aa20.53■□□□□ 0.88
GSDMD-216ENST00000534602 GIMAP7Q8NHV1 300 aa20.53■□□□□ 0.88
GSDMD-216ENST00000534602 ASB11Q8WXH4 323 aa20.53■□□□□ 0.88
GSDMD-216ENST00000534602 INPP5DQ92835 1189 aa20.53■□□□□ 0.88
GSDMD-216ENST00000534602 VPS50Q96JG6 964 aa20.53■□□□□ 0.88
GSDMD-216ENST00000534602 PKP4Q99569 1192 aa20.53■□□□□ 0.88
GSDMD-216ENST00000534602 ZNF552Q9H707 407 aaPredicted RBP20.53■□□□□ 0.88
GSDMD-216ENST00000534602 MRPS30Q9NP92 439 aaKnown RBP20.53■□□□□ 0.88
GSDMD-216ENST00000534602 FBXO6Q9NRD1 293 aaPredicted RBP20.53■□□□□ 0.88
GSDMD-216ENST00000534602 C20orf96Q9NUD7 363 aaPredicted RBP20.53■□□□□ 0.88
GSDMD-216ENST00000534602 UTP6Q9NYH9 597 aaKnown RBP20.53■□□□□ 0.88
GSDMD-216ENST00000534602 DHRS7Q9Y394 339 aa20.53■□□□□ 0.88
GSDMD-216ENST00000534602 MAD1L1Q9Y6D9 718 aa20.53■□□□□ 0.88
GSDMD-216ENST00000534602 USP9YO00507 2555 aaPredicted RBP20.53■□□□□ 0.88
GSDMD-216ENST00000534602 PCM1Q15154 2024 aa20.53■□□□□ 0.88
GSDMD-216ENST00000534602 LOC105369274A0A096LPK9 316 aa20.52■□□□□ 0.88
GSDMD-216ENST00000534602 LOC102723532A0A0G2JNH3 316 aa20.52■□□□□ 0.88
GSDMD-216ENST00000534602 GFYI3L273 518 aa20.52■□□□□ 0.88
GSDMD-216ENST00000534602 EIF3FO00303 357 aaPredicted RBP20.52■□□□□ 0.88
GSDMD-216ENST00000534602 VPS26AO75436 327 aa20.52■□□□□ 0.88
GSDMD-216ENST00000534602 CCNDBP1O95273 360 aa20.52■□□□□ 0.88
GSDMD-216ENST00000534602 SLC1A2P43004 574 aa20.52■□□□□ 0.88
GSDMD-216ENST00000534602 PNLIPRP1P54315 467 aa20.52■□□□□ 0.88
GSDMD-216ENST00000534602 FOXL2P58012 376 aa20.52■□□□□ 0.88
GSDMD-216ENST00000534602 PRDX1Q06830 199 aaKnown RBP20.52■□□□□ 0.88
GSDMD-216ENST00000534602 SRSF1Q07955 248 aaKnown RBP eCLIP20.52■□□□□ 0.88
GSDMD-216ENST00000534602 RAPSNQ13702 412 aa20.52■□□□□ 0.88
GSDMD-216ENST00000534602 INPP5JQ15735 1006 aaPredicted RBP20.52■□□□□ 0.88
GSDMD-216ENST00000534602 OR4N4Q8N0Y3 316 aa20.52■□□□□ 0.88
GSDMD-216ENST00000534602 SLC35F6Q8N357 371 aa20.52■□□□□ 0.88
GSDMD-216ENST00000534602 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.52■□□□□ 0.88
GSDMD-216ENST00000534602 TM9SF4Q92544 642 aa20.52■□□□□ 0.88
GSDMD-216ENST00000534602 SLC30A3Q99726 388 aa20.52■□□□□ 0.88
GSDMD-216ENST00000534602 PLCD4Q9BRC7 762 aa20.52■□□□□ 0.88
GSDMD-216ENST00000534602 FAM167BQ9BTA0 163 aa20.52■□□□□ 0.88
GSDMD-216ENST00000534602 ACAT2Q9BWD1 397 aa20.52■□□□□ 0.88
GSDMD-216ENST00000534602 ZNF304Q9HCX3 659 aa20.52■□□□□ 0.88
GSDMD-216ENST00000534602 SLC6A20Q9NP91 592 aa20.52■□□□□ 0.88
GSDMD-216ENST00000534602 SEMA3GQ9NS98 782 aa20.52■□□□□ 0.88
GSDMD-216ENST00000534602 ZC3H7BQ9UGR2 993 aaKnown RBP20.52■□□□□ 0.88
GSDMD-216ENST00000534602 CDC23Q9UJX2 597 aa20.52■□□□□ 0.88
GSDMD-216ENST00000534602 FBXO5Q9UKT4 447 aa20.52■□□□□ 0.88
GSDMD-216ENST00000534602 SNX12Q9UMY4 172 aa20.52■□□□□ 0.88
GSDMD-216ENST00000534602 SLC16A8O95907 504 aa20.51■□□□□ 0.87
GSDMD-216ENST00000534602 OR1D4P47884 311 aa20.51■□□□□ 0.87
GSDMD-216ENST00000534602 YBX1P67809 324 aaKnown RBP20.51■□□□□ 0.87
GSDMD-216ENST00000534602 ABATP80404 500 aa20.51■□□□□ 0.87
GSDMD-216ENST00000534602 MUM1Q2TAK8 710 aa20.51■□□□□ 0.87
GSDMD-216ENST00000534602 PRTGQ2VWP7 1150 aa20.51■□□□□ 0.87
GSDMD-216ENST00000534602 RNASEH2BQ5TBB1 312 aaKnown RBP20.51■□□□□ 0.87
GSDMD-216ENST00000534602 ICE2Q659A1 982 aa20.51■□□□□ 0.87
GSDMD-216ENST00000534602 SUSD1Q6UWL2 747 aa20.51■□□□□ 0.87
GSDMD-216ENST00000534602 CYHR1Q6ZMK1 362 aa20.51■□□□□ 0.87
GSDMD-216ENST00000534602 PAQR7Q86WK9 346 aa20.51■□□□□ 0.87
GSDMD-216ENST00000534602 TMEM151BQ8IW70 566 aa20.51■□□□□ 0.87
GSDMD-216ENST00000534602 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.51■□□□□ 0.87
GSDMD-216ENST00000534602 MFRPQ9BY79 579 aa20.51■□□□□ 0.87
GSDMD-216ENST00000534602 CTSFQ9UBX1 484 aa20.51■□□□□ 0.87
GSDMD-216ENST00000534602 FBXL4Q9UKA2 621 aa20.51■□□□□ 0.87
GSDMD-216ENST00000534602 HS3ST3B1Q9Y662 390 aa20.51■□□□□ 0.87
GSDMD-216ENST00000534602 NUP210LQ5VU65 1888 aa20.5■□□□□ 0.87
GSDMD-216ENST00000534602 E7ENX8 843 aa20.5■□□□□ 0.87
GSDMD-216ENST00000534602 SOCS6O14544 535 aa20.5■□□□□ 0.87
GSDMD-216ENST00000534602 ZBTB14O43829 449 aa20.5■□□□□ 0.87
GSDMD-216ENST00000534602 NRP2O60462 931 aa20.5■□□□□ 0.87
GSDMD-216ENST00000534602 EIF2S1P05198 315 aaKnown RBP20.5■□□□□ 0.87
GSDMD-216ENST00000534602 ERVK-10P10266 1014 aa20.5■□□□□ 0.87
GSDMD-216ENST00000534602 PGAM1P18669 254 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms