RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 TRMT6Q9UJA5 497 aaKnown RBP10□□□□□ -0.81
CAPN1-225ENST00000533704 PLAAQ9Y263 795 aa10□□□□□ -0.81
CAPN1-225ENST00000533704 PCDHGA9Q9Y5G4 932 aaKnown RBP10□□□□□ -0.81
CAPN1-225ENST00000533704 MAU2Q9Y6X3 613 aa10□□□□□ -0.81
CAPN1-225ENST00000533704 PTPN13Q12923 2485 aa10□□□□□ -0.81
CAPN1-225ENST00000533704 HECTD1Q9ULT8 2610 aa10□□□□□ -0.81
CAPN1-225ENST00000533704 LOC105369274A0A096LPK9 316 aa9.99□□□□□ -0.81
CAPN1-225ENST00000533704 LOC102723532A0A0G2JNH3 316 aa9.99□□□□□ -0.81
CAPN1-225ENST00000533704 HYKKA2RU49 373 aa9.99□□□□□ -0.81
CAPN1-225ENST00000533704 TTLL8A6PVC2 850 aa9.99□□□□□ -0.81
CAPN1-225ENST00000533704 ZNF839A8K0R7 811 aa9.99□□□□□ -0.81
CAPN1-225ENST00000533704 MYO1CO00159 1063 aa9.99□□□□□ -0.81
CAPN1-225ENST00000533704 MASP2O00187 686 aa9.99□□□□□ -0.81
CAPN1-225ENST00000533704 SMAPO00193 183 aa9.99□□□□□ -0.81
CAPN1-225ENST00000533704 ZBTB14O43829 449 aa9.99□□□□□ -0.81
CAPN1-225ENST00000533704 CD63P08962 238 aa9.99□□□□□ -0.81
CAPN1-225ENST00000533704 MPC1LP0DKB6 136 aa9.99□□□□□ -0.81
CAPN1-225ENST00000533704 PIM1P11309 404 aaPredicted RBP9.99□□□□□ -0.81
CAPN1-225ENST00000533704 CARSP49589 748 aaKnown RBP9.99□□□□□ -0.81
CAPN1-225ENST00000533704 DR1Q01658 176 aa9.99□□□□□ -0.81
CAPN1-225ENST00000533704 ESPL1Q14674 2120 aa9.99□□□□□ -0.81
CAPN1-225ENST00000533704 NAA25Q14CX7 972 aa9.99□□□□□ -0.81
CAPN1-225ENST00000533704 NADK2Q4G0N4 442 aa9.99□□□□□ -0.81
CAPN1-225ENST00000533704 MSS51Q4VC12 460 aa9.99□□□□□ -0.81
CAPN1-225ENST00000533704 SPANXN3Q5MJ09 141 aa9.99□□□□□ -0.81
CAPN1-225ENST00000533704 MRPL14Q6P1L8 145 aaKnown RBP9.99□□□□□ -0.81
CAPN1-225ENST00000533704 NEK10Q6ZWH5 1172 aa9.99□□□□□ -0.81
CAPN1-225ENST00000533704 UBE2R2Q712K3 238 aaPredicted RBP9.99□□□□□ -0.81
CAPN1-225ENST00000533704 PIWIL4Q7Z3Z4 852 aaKnown RBP9.99□□□□□ -0.81
CAPN1-225ENST00000533704 PPP1R32Q7Z5V6 425 aa9.99□□□□□ -0.81
CAPN1-225ENST00000533704 LMNTD2Q8IXW0 634 aa9.99□□□□□ -0.81
CAPN1-225ENST00000533704 PRSS58Q8IYP2 241 aa9.99□□□□□ -0.81
CAPN1-225ENST00000533704 OR4N4Q8N0Y3 316 aa9.99□□□□□ -0.81
CAPN1-225ENST00000533704 GABPB2Q8TAK5 448 aaPredicted RBP9.99□□□□□ -0.81
CAPN1-225ENST00000533704 CD200R1Q8TD46 325 aa9.99□□□□□ -0.81
CAPN1-225ENST00000533704 COL26A1Q96A83 441 aa9.99□□□□□ -0.81
CAPN1-225ENST00000533704 PTERQ96BW5 349 aa9.99□□□□□ -0.81
CAPN1-225ENST00000533704 CABS1Q96KC9 395 aa9.99□□□□□ -0.81
CAPN1-225ENST00000533704 PWWP2AQ96N64 755 aa9.99□□□□□ -0.81
CAPN1-225ENST00000533704 NAPGQ99747 312 aaPredicted RBP9.99□□□□□ -0.81
CAPN1-225ENST00000533704 EBNA1BP2Q99848 306 aaKnown RBP9.99□□□□□ -0.81
CAPN1-225ENST00000533704 ZFYVE21Q9BQ24 234 aa9.99□□□□□ -0.81
CAPN1-225ENST00000533704 TRIM51Q9BSJ1 452 aa9.99□□□□□ -0.81
CAPN1-225ENST00000533704 AARSD1Q9BTE6 412 aaKnown RBP9.99□□□□□ -0.81
CAPN1-225ENST00000533704 NUDT9Q9BW91 350 aa9.99□□□□□ -0.81
CAPN1-225ENST00000533704 YIPF2Q9BWQ6 316 aa9.99□□□□□ -0.81
CAPN1-225ENST00000533704 TRIM31Q9BZY9 425 aa9.99□□□□□ -0.81
CAPN1-225ENST00000533704 SOX17Q9H6I2 414 aaPredicted RBP9.99□□□□□ -0.81
CAPN1-225ENST00000533704 SLC22A11Q9NSA0 550 aa9.99□□□□□ -0.81
CAPN1-225ENST00000533704 P4HTMQ9NXG6 502 aa9.99□□□□□ -0.81
CAPN1-225ENST00000533704 GPR83Q9NYM4 423 aa9.99□□□□□ -0.81
CAPN1-225ENST00000533704 MAP10Q9P2G4 905 aa9.99□□□□□ -0.81
CAPN1-225ENST00000533704 SLC17A6Q9P2U8 582 aa9.99□□□□□ -0.81
CAPN1-225ENST00000533704 PCYOX1Q9UHG3 505 aa9.99□□□□□ -0.81
CAPN1-225ENST00000533704 CDC23Q9UJX2 597 aa9.99□□□□□ -0.81
CAPN1-225ENST00000533704 PYCARDQ9ULZ3 195 aa9.99□□□□□ -0.81
CAPN1-225ENST00000533704 CHMP2BQ9UQN3 213 aa9.99□□□□□ -0.81
CAPN1-225ENST00000533704 MED16Q9Y2X0 877 aa9.99□□□□□ -0.81
CAPN1-225ENST00000533704 DHRS7Q9Y394 339 aa9.99□□□□□ -0.81
CAPN1-225ENST00000533704 ZNF451Q9Y4E5 1061 aa9.99□□□□□ -0.81
CAPN1-225ENST00000533704 COMMD10Q9Y6G5 202 aa9.99□□□□□ -0.81
CAPN1-225ENST00000533704 FLNCQ14315 2725 aa9.99□□□□□ -0.81
CAPN1-225ENST00000533704 SHANK1Q9Y566 2161 aa9.99□□□□□ -0.81
CAPN1-225ENST00000533704 UBR5O95071 2799 aaPredicted RBP9.99□□□□□ -0.81
CAPN1-225ENST00000533704 H0YGG7 62 aa9.98□□□□□ -0.81
CAPN1-225ENST00000533704 SRPX2O60687 465 aaPredicted RBP9.98□□□□□ -0.81
CAPN1-225ENST00000533704 ALOX12BO75342 701 aa9.98□□□□□ -0.81
CAPN1-225ENST00000533704 CCNDBP1O95273 360 aa9.98□□□□□ -0.81
CAPN1-225ENST00000533704 SLC16A8O95907 504 aa9.98□□□□□ -0.81
CAPN1-225ENST00000533704 UMODP07911 640 aa9.98□□□□□ -0.81
CAPN1-225ENST00000533704 ENO3P13929 434 aaPredicted RBP9.98□□□□□ -0.81
CAPN1-225ENST00000533704 ITGAXP20702 1163 aa9.98□□□□□ -0.81
CAPN1-225ENST00000533704 HSD17B2P37059 387 aa9.98□□□□□ -0.81
CAPN1-225ENST00000533704 GCGRP47871 477 aa9.98□□□□□ -0.81
CAPN1-225ENST00000533704 ARF3P61204 181 aaPredicted RBP9.98□□□□□ -0.81
CAPN1-225ENST00000533704 FOXK1P85037 733 aa9.98□□□□□ -0.81
CAPN1-225ENST00000533704 ARHGAP19Q14CB8 494 aa9.98□□□□□ -0.81
CAPN1-225ENST00000533704 FAM214AQ32MH5 1076 aa9.98□□□□□ -0.81
CAPN1-225ENST00000533704 DCAF10Q5QP82 559 aa9.98□□□□□ -0.81
CAPN1-225ENST00000533704 RBM20Q5T481 1227 aaKnown RBP9.98□□□□□ -0.81
CAPN1-225ENST00000533704 YOD1Q5VVQ6 348 aaPredicted RBP9.98□□□□□ -0.81
CAPN1-225ENST00000533704 ICE2Q659A1 982 aa9.98□□□□□ -0.81
CAPN1-225ENST00000533704 COX15Q7KZN9 410 aa9.98□□□□□ -0.81
CAPN1-225ENST00000533704 RNF44Q7L0R7 432 aa9.98□□□□□ -0.81
CAPN1-225ENST00000533704 OVCH1Q7RTY7 1134 aa9.98□□□□□ -0.81
CAPN1-225ENST00000533704 ANKMY2Q8IV38 441 aa9.98□□□□□ -0.81
CAPN1-225ENST00000533704 IGDCC3Q8IVU1 814 aa9.98□□□□□ -0.81
CAPN1-225ENST00000533704 PALM2Q8IXS6 379 aa9.98□□□□□ -0.81
CAPN1-225ENST00000533704 PDIK1LQ8N165 341 aa9.98□□□□□ -0.81
CAPN1-225ENST00000533704 EFCAB3Q8N7B9 438 aa9.98□□□□□ -0.81
CAPN1-225ENST00000533704 CLEC1AQ8NC01 280 aa9.98□□□□□ -0.81
CAPN1-225ENST00000533704 C2CD4AQ8NCU7 369 aaPredicted RBP9.98□□□□□ -0.81
CAPN1-225ENST00000533704 ZNF480Q8WV37 535 aa9.98□□□□□ -0.81
CAPN1-225ENST00000533704 ASB11Q8WXH4 323 aa9.98□□□□□ -0.81
CAPN1-225ENST00000533704 FKBP10Q96AY3 582 aa9.98□□□□□ -0.81
CAPN1-225ENST00000533704 ALKBH8Q96BT7 664 aaKnown RBP9.98□□□□□ -0.81
CAPN1-225ENST00000533704 FER1L6-AS2Q96M78 137 aa9.98□□□□□ -0.81
CAPN1-225ENST00000533704 IP6K3Q96PC2 410 aa9.98□□□□□ -0.81
CAPN1-225ENST00000533704 KLHL42Q9P2K6 505 aa9.98□□□□□ -0.81
CAPN1-225ENST00000533704 CTSFQ9UBX1 484 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms