RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 HERVK_113P63132 956 aa17.44■□□□□ 0.38
LTBP3-210ENST00000528516 MS4A13Q5J8X5 152 aa17.44■□□□□ 0.38
LTBP3-210ENST00000528516 CILP2Q8IUL8 1156 aa17.44■□□□□ 0.38
LTBP3-210ENST00000528516 HID1Q8IV36 788 aa17.44■□□□□ 0.38
LTBP3-210ENST00000528516 MRGPRX2Q96LB1 330 aa17.44■□□□□ 0.38
LTBP3-210ENST00000528516 PPP3R2Q96LZ3 170 aa17.44■□□□□ 0.38
LTBP3-210ENST00000528516 ERVK-6Q9BXR3 956 aa17.44■□□□□ 0.38
LTBP3-210ENST00000528516 ADAMTS5Q9UNA0 930 aa17.44■□□□□ 0.38
LTBP3-210ENST00000528516 TPST2O60704 377 aa17.44■□□□□ 0.38
LTBP3-210ENST00000528516 GLUD1P00367 558 aa17.44■□□□□ 0.38
LTBP3-210ENST00000528516 OPN1SWP03999 348 aa17.44■□□□□ 0.38
LTBP3-210ENST00000528516 G6PDP11413 515 aa17.44■□□□□ 0.38
LTBP3-210ENST00000528516 C18orf21Q32NC0 220 aaPredicted RBP17.44■□□□□ 0.38
LTBP3-210ENST00000528516 SYCE2Q6PIF2 218 aa17.44■□□□□ 0.38
LTBP3-210ENST00000528516 TMCO2Q7Z6W1 182 aaPredicted RBP17.44■□□□□ 0.38
LTBP3-210ENST00000528516 LACC1Q8IV20 430 aa17.44■□□□□ 0.38
LTBP3-210ENST00000528516 OR5H6Q8NGV6 325 aa17.44■□□□□ 0.38
LTBP3-210ENST00000528516 SNX18Q96RF0 628 aa17.44■□□□□ 0.38
LTBP3-210ENST00000528516 SMG9Q9H0W8 520 aaKnown RBP17.44■□□□□ 0.38
LTBP3-210ENST00000528516 SDR39U1Q9NRG7 319 aaPredicted RBP17.44■□□□□ 0.38
LTBP3-210ENST00000528516 AP3D1O14617 1153 aa17.44■□□□□ 0.38
LTBP3-210ENST00000528516 LDB2O43679 373 aa17.44■□□□□ 0.38
LTBP3-210ENST00000528516 HTR1EP28566 365 aa17.44■□□□□ 0.38
LTBP3-210ENST00000528516 FAM189BP81408 668 aa17.44■□□□□ 0.38
LTBP3-210ENST00000528516 CYP4F8P98187 520 aa17.44■□□□□ 0.38
LTBP3-210ENST00000528516 TP53BP2Q13625 1128 aa17.44■□□□□ 0.38
LTBP3-210ENST00000528516 DGKKQ5KSL6 1271 aa17.44■□□□□ 0.38
LTBP3-210ENST00000528516 VPS35Q96QK1 796 aa17.44■□□□□ 0.38
LTBP3-210ENST00000528516 WRAP53Q9BUR4 548 aaKnown RBP17.44■□□□□ 0.38
LTBP3-210ENST00000528516 PCDHGB6Q9Y5F9 930 aa17.44■□□□□ 0.38
LTBP3-210ENST00000528516 PTPRFP10586 1907 aa17.44■□□□□ 0.38
LTBP3-210ENST00000528516 UNCXA6NJT0 531 aa17.43■□□□□ 0.38
LTBP3-210ENST00000528516 ERAL1O75616 437 aaKnown RBP17.43■□□□□ 0.38
LTBP3-210ENST00000528516 ARNTP27540 789 aa17.43■□□□□ 0.38
LTBP3-210ENST00000528516 GTF2H2Q13888 395 aa17.43■□□□□ 0.38
LTBP3-210ENST00000528516 BCL7AQ4VC05 210 aa17.43■□□□□ 0.38
LTBP3-210ENST00000528516 GTF2H2CQ6P1K8 395 aa17.43■□□□□ 0.38
LTBP3-210ENST00000528516 C8orf82Q6P1X6 216 aaPredicted RBP17.43■□□□□ 0.38
LTBP3-210ENST00000528516 OTOP2Q7RTS6 562 aa17.43■□□□□ 0.38
LTBP3-210ENST00000528516 TRIM48Q8IWZ4 208 aa17.43■□□□□ 0.38
LTBP3-210ENST00000528516 MYO19Q96H55 970 aa17.43■□□□□ 0.38
LTBP3-210ENST00000528516 AARSD1Q9BTE6 412 aaKnown RBP17.43■□□□□ 0.38
LTBP3-210ENST00000528516 SLIRPQ9GZT3 109 aaKnown RBP17.43■□□□□ 0.38
LTBP3-210ENST00000528516 TMEM39AQ9NV64 488 aa17.43■□□□□ 0.38
LTBP3-210ENST00000528516 DYRK1BQ9Y463 629 aa17.43■□□□□ 0.38
LTBP3-210ENST00000528516 PCDHGA10Q9Y5H3 936 aa17.43■□□□□ 0.38
LTBP3-210ENST00000528516 MAU2Q9Y6X3 613 aa17.43■□□□□ 0.38
LTBP3-210ENST00000528516 TRBV23OR9-2A0A075B6M9 112 aa17.43■□□□□ 0.38
LTBP3-210ENST00000528516 GPR32O75388 356 aa17.43■□□□□ 0.38
LTBP3-210ENST00000528516 GJB5O95377 273 aa17.43■□□□□ 0.38
LTBP3-210ENST00000528516 YES1P07947 543 aa17.43■□□□□ 0.38
LTBP3-210ENST00000528516 KCNE1P15382 129 aa17.43■□□□□ 0.38
LTBP3-210ENST00000528516 PURAQ00577 322 aaKnown RBP17.43■□□□□ 0.38
LTBP3-210ENST00000528516 ZNF549Q6P9A3 640 aa17.43■□□□□ 0.38
LTBP3-210ENST00000528516 MBOAT1Q6ZNC8 495 aa17.43■□□□□ 0.38
LTBP3-210ENST00000528516 TCAIMQ8N3R3 496 aa17.43■□□□□ 0.38
LTBP3-210ENST00000528516 ZMIZ2Q8NF64 920 aa17.43■□□□□ 0.38
LTBP3-210ENST00000528516 BPIFB1Q8TDL5 484 aa17.43■□□□□ 0.38
LTBP3-210ENST00000528516 MBOAT4Q96T53 435 aa17.43■□□□□ 0.38
LTBP3-210ENST00000528516 C12orf4Q9NQ89 552 aa17.43■□□□□ 0.38
LTBP3-210ENST00000528516 ZC4H2Q9NQZ6 224 aa17.43■□□□□ 0.38
LTBP3-210ENST00000528516 CRNNQ9UBG3 495 aaPredicted RBP17.43■□□□□ 0.38
LTBP3-210ENST00000528516 HCSTQ9UBK5 93 aa17.43■□□□□ 0.38
LTBP3-210ENST00000528516 RGPD3A6NKT7 1758 aaPredicted RBP17.43■□□□□ 0.38
LTBP3-210ENST00000528516 RGPD4Q7Z3J3 1758 aa17.43■□□□□ 0.38
LTBP3-210ENST00000528516 OR6C70A6NIJ9 312 aa17.43■□□□□ 0.38
LTBP3-210ENST00000528516 PCP4L1A6NKN8 68 aa17.43■□□□□ 0.38
LTBP3-210ENST00000528516 STATHP02808 62 aa17.43■□□□□ 0.38
LTBP3-210ENST00000528516 RPS7P62081 194 aaKnown RBP17.43■□□□□ 0.38
LTBP3-210ENST00000528516 SP3Q02447 781 aa17.43■□□□□ 0.38
LTBP3-210ENST00000528516 MED22Q15528 200 aa17.43■□□□□ 0.38
LTBP3-210ENST00000528516 CYP27C1Q4G0S4 372 aa17.43■□□□□ 0.38
LTBP3-210ENST00000528516 SETMARQ53H47 684 aaPredicted RBP17.43■□□□□ 0.38
LTBP3-210ENST00000528516 GPR153Q6NV75 609 aa17.43■□□□□ 0.38
LTBP3-210ENST00000528516 KBTBD8Q8NFY9 601 aa17.43■□□□□ 0.38
LTBP3-210ENST00000528516 PDP1Q9P0J1 537 aaPredicted RBP17.43■□□□□ 0.38
LTBP3-210ENST00000528516 GLYATL1P3A0A0U1RQE8 302 aa17.42■□□□□ 0.38
LTBP3-210ENST00000528516 TNFRSF21O75509 655 aa17.42■□□□□ 0.38
LTBP3-210ENST00000528516 GJA5P36382 358 aa17.42■□□□□ 0.38
LTBP3-210ENST00000528516 SELPLGQ14242 412 aa17.42■□□□□ 0.38
LTBP3-210ENST00000528516 STK40Q8N2I9 435 aa17.42■□□□□ 0.38
LTBP3-210ENST00000528516 SVOPLQ8N434 492 aa17.42■□□□□ 0.38
LTBP3-210ENST00000528516 TMEM199Q8N511 208 aa17.42■□□□□ 0.38
LTBP3-210ENST00000528516 OR52B6Q8NGF0 335 aa17.42■□□□□ 0.38
LTBP3-210ENST00000528516 Q96MT0 163 aa17.42■□□□□ 0.38
LTBP3-210ENST00000528516 TLR9Q9NR96 1032 aa17.42■□□□□ 0.38
LTBP3-210ENST00000528516 UTS2RQ9UKP6 389 aa17.42■□□□□ 0.38
LTBP3-210ENST00000528516 PCDHB14Q9Y5E9 798 aa17.42■□□□□ 0.38
LTBP3-210ENST00000528516 HAT1O14929 419 aa17.42■□□□□ 0.38
LTBP3-210ENST00000528516 VPS4BO75351 444 aa17.42■□□□□ 0.38
LTBP3-210ENST00000528516 CNMDO75829 334 aa17.42■□□□□ 0.38
LTBP3-210ENST00000528516 CLDN7O95471 211 aa17.42■□□□□ 0.38
LTBP3-210ENST00000528516 GADD45AP24522 165 aa17.42■□□□□ 0.38
LTBP3-210ENST00000528516 KCNC1P48547 511 aa17.42■□□□□ 0.38
LTBP3-210ENST00000528516 ISL1P61371 349 aa17.42■□□□□ 0.38
LTBP3-210ENST00000528516 GHRHRQ02643 423 aa17.42■□□□□ 0.38
LTBP3-210ENST00000528516 PCBP1Q15365 356 aaKnown RBP eCLIP17.42■□□□□ 0.388e-11■■■□□ 17.6
LTBP3-210ENST00000528516 PARP15Q460N3 678 aa17.42■□□□□ 0.38
LTBP3-210ENST00000528516 MARCH8Q5T0T0 291 aa17.42■□□□□ 0.38
LTBP3-210ENST00000528516 CCSAPQ6IQ19 270 aaPredicted RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms