RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 GRHL1Q9NZI5 618 aa25.28■■□□□ 1.64
TSPAN4-217ENST00000527644 ANKMY1Q9P2S6 941 aa25.28■■□□□ 1.64
TSPAN4-217ENST00000527644 DHCR7Q9UBM7 475 aaKnown RBP25.28■■□□□ 1.64
TSPAN4-217ENST00000527644 CDC23Q9UJX2 597 aa25.28■■□□□ 1.64
TSPAN4-217ENST00000527644 TCFL5Q9UL49 500 aa25.28■■□□□ 1.64
TSPAN4-217ENST00000527644 PCM1Q15154 2024 aa25.28■■□□□ 1.64
TSPAN4-217ENST00000527644 SLC16A5O15375 505 aa25.27■■□□□ 1.64
TSPAN4-217ENST00000527644 CCNDBP1O95273 360 aa25.27■■□□□ 1.64
TSPAN4-217ENST00000527644 FDXRP22570 491 aa25.27■■□□□ 1.64
TSPAN4-217ENST00000527644 GCGRP47871 477 aa25.27■■□□□ 1.64
TSPAN4-217ENST00000527644 PRDX1Q06830 199 aaKnown RBP25.27■■□□□ 1.64
TSPAN4-217ENST00000527644 SP140Q13342 867 aa25.27■■□□□ 1.64
TSPAN4-217ENST00000527644 PDAP1Q13442 181 aaKnown RBP25.27■■□□□ 1.64
TSPAN4-217ENST00000527644 TSTA3Q13630 321 aaPredicted RBP25.27■■□□□ 1.64
TSPAN4-217ENST00000527644 C1orf189Q5VU69 101 aa25.27■■□□□ 1.64
TSPAN4-217ENST00000527644 YOD1Q5VVQ6 348 aaPredicted RBP25.27■■□□□ 1.64
TSPAN4-217ENST00000527644 SLC26A11Q86WA9 606 aa25.27■■□□□ 1.64
TSPAN4-217ENST00000527644 DPH7Q9BTV6 452 aa25.27■■□□□ 1.64
TSPAN4-217ENST00000527644 SLC25A18Q9H1K4 315 aa25.27■■□□□ 1.64
TSPAN4-217ENST00000527644 OR2A25A4D2G3 310 aa25.26■■□□□ 1.63
TSPAN4-217ENST00000527644 B8ZZF3 427 aa25.26■■□□□ 1.63
TSPAN4-217ENST00000527644 CD63P08962 238 aa25.26■■□□□ 1.63
TSPAN4-217ENST00000527644 IL2P60568 153 aa25.26■■□□□ 1.63
TSPAN4-217ENST00000527644 YBX1P67809 324 aaKnown RBP25.26■■□□□ 1.63
TSPAN4-217ENST00000527644 CAV1Q03135 178 aa25.26■■□□□ 1.63
TSPAN4-217ENST00000527644 IL10RAQ13651 578 aa25.26■■□□□ 1.63
TSPAN4-217ENST00000527644 GRM7Q14831 915 aa25.26■■□□□ 1.63
TSPAN4-217ENST00000527644 ICE2Q659A1 982 aa25.26■■□□□ 1.63
TSPAN4-217ENST00000527644 RNF44Q7L0R7 432 aa25.26■■□□□ 1.63
TSPAN4-217ENST00000527644 PPFIBP2Q8ND30 876 aa25.26■■□□□ 1.63
TSPAN4-217ENST00000527644 LINGO1Q96FE5 620 aa25.26■■□□□ 1.63
TSPAN4-217ENST00000527644 CCDC138Q96M89 665 aa25.26■■□□□ 1.63
TSPAN4-217ENST00000527644 PARVBQ9HBI1 364 aa25.26■■□□□ 1.63
TSPAN4-217ENST00000527644 SLC6A20Q9NP91 592 aa25.26■■□□□ 1.63
TSPAN4-217ENST00000527644 SAYSD1Q9NPB0 183 aa25.26■■□□□ 1.63
TSPAN4-217ENST00000527644 NSMCE4AQ9NXX6 385 aa25.26■■□□□ 1.63
TSPAN4-217ENST00000527644 UTP6Q9NYH9 597 aaKnown RBP25.26■■□□□ 1.63
TSPAN4-217ENST00000527644 TAC3Q9UHF0 121 aa25.26■■□□□ 1.63
TSPAN4-217ENST00000527644 ADAMTS6Q9UKP5 1117 aa25.26■■□□□ 1.63
TSPAN4-217ENST00000527644 MAN2B2Q9Y2E5 1009 aa25.26■■□□□ 1.63
TSPAN4-217ENST00000527644 PADI2Q9Y2J8 665 aa25.26■■□□□ 1.63
TSPAN4-217ENST00000527644 SPTA1P02549 2419 aa25.26■■□□□ 1.63
TSPAN4-217ENST00000527644 ZNF462Q96JM2 2506 aa25.25■■□□□ 1.63
TSPAN4-217ENST00000527644 FITM1A5D6W6 292 aa25.25■■□□□ 1.63
TSPAN4-217ENST00000527644 ALAS2P22557 587 aa25.25■■□□□ 1.63
TSPAN4-217ENST00000527644 IMPA1P29218 277 aa25.25■■□□□ 1.63
TSPAN4-217ENST00000527644 ABATP80404 500 aa25.25■■□□□ 1.63
TSPAN4-217ENST00000527644 NFATC3Q12968 1075 aa25.25■■□□□ 1.63
TSPAN4-217ENST00000527644 STRA8Q7Z7C7 330 aa25.25■■□□□ 1.63
TSPAN4-217ENST00000527644 ZNF605Q86T29 641 aa25.25■■□□□ 1.63
TSPAN4-217ENST00000527644 LRRC56Q8IYG6 542 aaPredicted RBP25.25■■□□□ 1.63
TSPAN4-217ENST00000527644 TTC29Q8NA56 475 aaPredicted RBP25.25■■□□□ 1.63
TSPAN4-217ENST00000527644 PLCD4Q9BRC7 762 aa25.25■■□□□ 1.63
TSPAN4-217ENST00000527644 GPN3Q9UHW5 284 aaPredicted RBP25.25■■□□□ 1.63
TSPAN4-217ENST00000527644 PDE10AQ9Y233 779 aa25.25■■□□□ 1.63
TSPAN4-217ENST00000527644 PSAT1Q9Y617 370 aa25.25■■□□□ 1.63
TSPAN4-217ENST00000527644 A0A0J9YVX5 310 aa25.24■■□□□ 1.63
TSPAN4-217ENST00000527644 TSPAN12O95859 305 aa25.24■■□□□ 1.63
TSPAN4-217ENST00000527644 PLTPP55058 493 aa25.24■■□□□ 1.63
TSPAN4-217ENST00000527644 VSX2P58304 361 aaPredicted RBP25.24■■□□□ 1.63
TSPAN4-217ENST00000527644 NFKB2Q00653 900 aa25.24■■□□□ 1.63
TSPAN4-217ENST00000527644 ILF2Q12905 390 aaKnown RBP25.24■■□□□ 1.63
TSPAN4-217ENST00000527644 FAM214AQ32MH5 1076 aa25.24■■□□□ 1.63
TSPAN4-217ENST00000527644 NKAIN1Q4KMZ8 207 aa25.24■■□□□ 1.63
TSPAN4-217ENST00000527644 WASHC2DQ5SRD0 308 aa25.24■■□□□ 1.63
TSPAN4-217ENST00000527644 MLIPQ5VWP3 458 aa25.24■■□□□ 1.63
TSPAN4-217ENST00000527644 FBXO42Q6P3S6 717 aa25.24■■□□□ 1.63
TSPAN4-217ENST00000527644 TTLL10Q6ZVT0 673 aa25.24■■□□□ 1.63
TSPAN4-217ENST00000527644 ZC3HC1Q86WB0 502 aaKnown RBP25.24■■□□□ 1.63
TSPAN4-217ENST00000527644 OLFM1Q99784 485 aa25.24■■□□□ 1.63
TSPAN4-217ENST00000527644 ZFYVE21Q9BQ24 234 aa25.24■■□□□ 1.63
TSPAN4-217ENST00000527644 PHACTR1Q9C0D0 580 aa25.24■■□□□ 1.63
TSPAN4-217ENST00000527644 CUTCQ9NTM9 273 aa25.24■■□□□ 1.63
TSPAN4-217ENST00000527644 IFT80Q9P2H3 777 aaPredicted RBP25.24■■□□□ 1.63
TSPAN4-217ENST00000527644 BOD1L1Q8NFC6 3051 aa25.23■■□□□ 1.63
TSPAN4-217ENST00000527644 A0A1B0GX78 115 aa25.23■■□□□ 1.63
TSPAN4-217ENST00000527644 NRP2O60462 931 aa25.23■■□□□ 1.63
TSPAN4-217ENST00000527644 URI1O94763 535 aaPredicted RBP25.23■■□□□ 1.63
TSPAN4-217ENST00000527644 HIST1H2AGP0C0S8 130 aaPredicted RBP25.23■■□□□ 1.63
TSPAN4-217ENST00000527644 HIST1H2ADP20671 130 aa25.23■■□□□ 1.63
TSPAN4-217ENST00000527644 PMS2P54278 862 aa25.23■■□□□ 1.63
TSPAN4-217ENST00000527644 THEMIS2Q5TEJ8 643 aa25.23■■□□□ 1.63
TSPAN4-217ENST00000527644 FRMPD2BQ6IN97 320 aa25.23■■□□□ 1.63
TSPAN4-217ENST00000527644 PAQR7Q86WK9 346 aa25.23■■□□□ 1.63
TSPAN4-217ENST00000527644 APLFQ8IW19 511 aaPredicted RBP25.23■■□□□ 1.63
TSPAN4-217ENST00000527644 ADAMTS17Q8TE56 1095 aa25.23■■□□□ 1.63
TSPAN4-217ENST00000527644 HIST1H2AHQ96KK5 128 aa25.23■■□□□ 1.63
TSPAN4-217ENST00000527644 HIST1H2AJQ99878 128 aa25.23■■□□□ 1.63
TSPAN4-217ENST00000527644 H2AFJQ9BTM1 129 aa25.23■■□□□ 1.63
TSPAN4-217ENST00000527644 STOX2Q9P2F5 926 aaPredicted RBP25.23■■□□□ 1.63
TSPAN4-217ENST00000527644 NDOR1Q9UHB4 597 aa25.23■■□□□ 1.63
TSPAN4-217ENST00000527644 FER1L5A0AVI2 2057 aa25.23■■□□□ 1.63
TSPAN4-217ENST00000527644 BAHCC1Q9P281 2608 aa25.22■■□□□ 1.63
TSPAN4-217ENST00000527644 IGKV1-8A0A0C4DH67 115 aa25.22■■□□□ 1.63
TSPAN4-217ENST00000527644 DSCR3O14972 297 aa25.22■■□□□ 1.63
TSPAN4-217ENST00000527644 KLF7O75840 302 aaPredicted RBP25.22■■□□□ 1.63
TSPAN4-217ENST00000527644 SSTR1P30872 391 aa25.22■■□□□ 1.63
TSPAN4-217ENST00000527644 RELAQ04206 551 aa25.22■■□□□ 1.63
TSPAN4-217ENST00000527644 WHAMMP3Q1A5X7 153 aa25.22■■□□□ 1.63
TSPAN4-217ENST00000527644 ZNF425Q6IV72 752 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms