RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 FCRL6Q6DN72 434 aa12.06□□□□□ -0.48
VEGFA-225ENST00000523950 ZNF425Q6IV72 752 aa12.06□□□□□ -0.48
VEGFA-225ENST00000523950 CAPN13Q6MZZ7 669 aaPredicted RBP12.06□□□□□ -0.48
VEGFA-225ENST00000523950 LCTLQ6UWM7 567 aa12.06□□□□□ -0.48
VEGFA-225ENST00000523950 CCDC81Q6ZN84 652 aa12.06□□□□□ -0.48
VEGFA-225ENST00000523950 RAPH1Q70E73 1250 aa12.06□□□□□ -0.48
VEGFA-225ENST00000523950 FRA10AC1Q70Z53 315 aa12.06□□□□□ -0.48
VEGFA-225ENST00000523950 RNF44Q7L0R7 432 aa12.06□□□□□ -0.48
VEGFA-225ENST00000523950 TBC1D1Q86TI0 1168 aaPredicted RBP12.06□□□□□ -0.48
VEGFA-225ENST00000523950 SPNS2Q8IVW8 549 aa12.06□□□□□ -0.48
VEGFA-225ENST00000523950 TCAIMQ8N3R3 496 aa12.06□□□□□ -0.48
VEGFA-225ENST00000523950 ZSCAN1Q8NBB4 408 aa12.06□□□□□ -0.48
VEGFA-225ENST00000523950 PPFIBP2Q8ND30 876 aa12.06□□□□□ -0.48
VEGFA-225ENST00000523950 OR56A3Q8NH54 315 aa12.06□□□□□ -0.48
VEGFA-225ENST00000523950 OR1L3Q8NH93 324 aa12.06□□□□□ -0.48
VEGFA-225ENST00000523950 ANKRD49Q8WVL7 239 aa12.06□□□□□ -0.48
VEGFA-225ENST00000523950 HNRNPLLQ8WVV9 542 aaKnown RBP12.06□□□□□ -0.48
VEGFA-225ENST00000523950 UBXN10Q96LJ8 280 aa12.06□□□□□ -0.48
VEGFA-225ENST00000523950 DPH2Q9BQC3 489 aaPredicted RBP12.06□□□□□ -0.48
VEGFA-225ENST00000523950 HAUS8Q9BT25 410 aa12.06□□□□□ -0.48
VEGFA-225ENST00000523950 ACAT2Q9BWD1 397 aa12.06□□□□□ -0.48
VEGFA-225ENST00000523950 SGPP1Q9BX95 441 aa12.06□□□□□ -0.48
VEGFA-225ENST00000523950 TXLNGYQ9BZA5 131 aa12.06□□□□□ -0.48
VEGFA-225ENST00000523950 SLC7A5P2Q9GIP4 190 aa12.06□□□□□ -0.48
VEGFA-225ENST00000523950 ACTR5Q9H9F9 607 aaPredicted RBP12.06□□□□□ -0.48
VEGFA-225ENST00000523950 EURLQ9NYK6 297 aa12.06□□□□□ -0.48
VEGFA-225ENST00000523950 FETUBQ9UGM5 382 aa12.06□□□□□ -0.48
VEGFA-225ENST00000523950 TAC3Q9UHF0 121 aa12.06□□□□□ -0.48
VEGFA-225ENST00000523950 ZNF180Q9UJW8 692 aa12.06□□□□□ -0.48
VEGFA-225ENST00000523950 PADI1Q9ULC6 663 aa12.06□□□□□ -0.48
VEGFA-225ENST00000523950 SNX7Q9UNH6 387 aa12.06□□□□□ -0.48
VEGFA-225ENST00000523950 SRPK3Q9UPE1 567 aa12.06□□□□□ -0.48
VEGFA-225ENST00000523950 ANKRD12Q6UB98 2062 aa12.06□□□□□ -0.48
VEGFA-225ENST00000523950 A0A087X1B8 175 aa12.05□□□□□ -0.48
VEGFA-225ENST00000523950 NPEPPSL1A6NEC2 478 aa12.05□□□□□ -0.48
VEGFA-225ENST00000523950 C21orf140B9A014 251 aa12.05□□□□□ -0.48
VEGFA-225ENST00000523950 H3BMH7 237 aa12.05□□□□□ -0.48
VEGFA-225ENST00000523950 K7ENP7 123 aa12.05□□□□□ -0.48
VEGFA-225ENST00000523950 CDC7O00311 574 aa12.05□□□□□ -0.48
VEGFA-225ENST00000523950 ZSCAN9O15535 394 aaPredicted RBP12.05□□□□□ -0.48
VEGFA-225ENST00000523950 RIPK2O43353 540 aa12.05□□□□□ -0.48
VEGFA-225ENST00000523950 KRT38O76015 456 aa12.05□□□□□ -0.48
VEGFA-225ENST00000523950 KLK3P07288 261 aaPredicted RBP12.05□□□□□ -0.48
VEGFA-225ENST00000523950 EZRP15311 586 aaKnown RBP12.05□□□□□ -0.48
VEGFA-225ENST00000523950 CD1DP15813 335 aa12.05□□□□□ -0.48
VEGFA-225ENST00000523950 MSH2P43246 934 aa12.05□□□□□ -0.48
VEGFA-225ENST00000523950 SERPINB8P50452 374 aa12.05□□□□□ -0.48
VEGFA-225ENST00000523950 ARSFP54793 590 aa12.05□□□□□ -0.48
VEGFA-225ENST00000523950 VAC14Q08AM6 782 aa12.05□□□□□ -0.48
VEGFA-225ENST00000523950 TSTA3Q13630 321 aaPredicted RBP12.05□□□□□ -0.48
VEGFA-225ENST00000523950 UAP1Q16222 522 aaPredicted RBP12.05□□□□□ -0.48
VEGFA-225ENST00000523950 COL28A1Q2UY09 1125 aa12.05□□□□□ -0.48
VEGFA-225ENST00000523950 DEFB110Q30KQ9 67 aa12.05□□□□□ -0.48
VEGFA-225ENST00000523950 TAF1BQ53T94 588 aaPredicted RBP12.05□□□□□ -0.48
VEGFA-225ENST00000523950 INO80CQ6PI98 192 aaPredicted RBP12.05□□□□□ -0.48
VEGFA-225ENST00000523950 PAQR7Q86WK9 346 aa12.05□□□□□ -0.48
VEGFA-225ENST00000523950 MCATQ8IVS2 390 aaKnown RBP12.05□□□□□ -0.48
VEGFA-225ENST00000523950 FAM20CQ8IXL6 584 aa12.05□□□□□ -0.48
VEGFA-225ENST00000523950 GALNT6Q8NCL4 622 aa12.05□□□□□ -0.48
VEGFA-225ENST00000523950 PROKR1Q8TCW9 393 aa12.05□□□□□ -0.48
VEGFA-225ENST00000523950 ISL2Q96A47 359 aa12.05□□□□□ -0.48
VEGFA-225ENST00000523950 KIAA1191Q96A73 305 aa12.05□□□□□ -0.48
VEGFA-225ENST00000523950 MED8Q96G25 268 aa12.05□□□□□ -0.48
VEGFA-225ENST00000523950 ZNF285Q96NJ3 590 aa12.05□□□□□ -0.48
VEGFA-225ENST00000523950 PAFAH2Q99487 392 aa12.05□□□□□ -0.48
VEGFA-225ENST00000523950 ZFYVE21Q9BQ24 234 aa12.05□□□□□ -0.48
VEGFA-225ENST00000523950 C17orf62Q9BQA9 187 aa12.05□□□□□ -0.48
VEGFA-225ENST00000523950 PLCD4Q9BRC7 762 aa12.05□□□□□ -0.48
VEGFA-225ENST00000523950 DPH7Q9BTV6 452 aa12.05□□□□□ -0.48
VEGFA-225ENST00000523950 PRORYQ9H606 182 aa12.05□□□□□ -0.48
VEGFA-225ENST00000523950 GPN2Q9H9Y4 310 aaPredicted RBP12.05□□□□□ -0.48
VEGFA-225ENST00000523950 SLC6A20Q9NP91 592 aa12.05□□□□□ -0.48
VEGFA-225ENST00000523950 LHX9Q9NQ69 397 aa12.05□□□□□ -0.48
VEGFA-225ENST00000523950 TMEM184CQ9NVA4 438 aa12.05□□□□□ -0.48
VEGFA-225ENST00000523950 KCND3Q9UK17 655 aa12.05□□□□□ -0.48
VEGFA-225ENST00000523950 ACOT9Q9Y305 439 aa12.05□□□□□ -0.48
VEGFA-225ENST00000523950 HEATR5BQ9P2D3 2071 aa12.05□□□□□ -0.48
VEGFA-225ENST00000523950 EXOC1LA0A1B0GW35 172 aa12.04□□□□□ -0.48
VEGFA-225ENST00000523950 ZNF749O43361 778 aa12.04□□□□□ -0.48
VEGFA-225ENST00000523950 GUCA1CO95843 209 aa12.04□□□□□ -0.48
VEGFA-225ENST00000523950 NTRK1P04629 796 aa12.04□□□□□ -0.48
VEGFA-225ENST00000523950 LTA4HP09960 611 aaKnown RBP12.04□□□□□ -0.48
VEGFA-225ENST00000523950 SLC35E2BP0CK96 405 aa12.04□□□□□ -0.48
VEGFA-225ENST00000523950 LIFP15018 202 aa12.04□□□□□ -0.48
VEGFA-225ENST00000523950 RORAP35398 523 aa12.04□□□□□ -0.48
VEGFA-225ENST00000523950 CSRP3P50461 194 aa12.04□□□□□ -0.48
VEGFA-225ENST00000523950 NAE1Q13564 534 aa12.04□□□□□ -0.48
VEGFA-225ENST00000523950 GRM7Q14831 915 aa12.04□□□□□ -0.48
VEGFA-225ENST00000523950 TGFBIQ15582 683 aa12.04□□□□□ -0.48
VEGFA-225ENST00000523950 TSNQ15631 228 aaKnown RBP12.04□□□□□ -0.48
VEGFA-225ENST00000523950 CRTC2Q53ET0 693 aaPredicted RBP12.04□□□□□ -0.48
VEGFA-225ENST00000523950 UBAP2Q5T6F2 1119 aaKnown RBP12.04□□□□□ -0.48
VEGFA-225ENST00000523950 LGSNQ5TDP6 509 aa12.04□□□□□ -0.48
VEGFA-225ENST00000523950 MROH9Q5TGP6 573 aa12.04□□□□□ -0.48
VEGFA-225ENST00000523950 RHBDD2Q6NTF9 364 aa12.04□□□□□ -0.48
VEGFA-225ENST00000523950 ZNF517Q6ZMY9 492 aaPredicted RBP12.04□□□□□ -0.48
VEGFA-225ENST00000523950 MBOAT1Q6ZNC8 495 aa12.04□□□□□ -0.48
VEGFA-225ENST00000523950 GPR155Q7Z3F1 870 aa12.04□□□□□ -0.48
VEGFA-225ENST00000523950 CMC1Q7Z7K0 106 aa12.04□□□□□ -0.48
VEGFA-225ENST00000523950 C17orf64Q86WR6 236 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms