RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 AMER2Q8N7J2 671 aa24.72■■□□□ 1.55
PVT1-219ENST00000523427 ITLN2Q8WWU7 325 aaPredicted RBP24.72■■□□□ 1.55
PVT1-219ENST00000523427 CARD6Q9BX69 1037 aa24.72■■□□□ 1.55
PVT1-219ENST00000523427 NFS1Q9Y697 457 aa24.72■■□□□ 1.55
PVT1-219ENST00000523427 TRAV17A0A0B4J275 112 aa24.71■■□□□ 1.55
PVT1-219ENST00000523427 TARM1B6A8C7 271 aa24.71■■□□□ 1.55
PVT1-219ENST00000523427 COX6A1P12074 109 aa24.71■■□□□ 1.55
PVT1-219ENST00000523427 CXCR2P25025 360 aa24.71■■□□□ 1.55
PVT1-219ENST00000523427 GRIA1P42261 906 aa24.71■■□□□ 1.55
PVT1-219ENST00000523427 YBX1P67809 324 aaKnown RBP24.71■■□□□ 1.55
PVT1-219ENST00000523427 ZXDCQ2QGD7 858 aaPredicted RBP24.71■■□□□ 1.55
PVT1-219ENST00000523427 PTRHD1Q6GMV3 140 aaKnown RBP24.71■■□□□ 1.55
PVT1-219ENST00000523427 NDUFAF7Q7L592 441 aa24.71■■□□□ 1.55
PVT1-219ENST00000523427 MRGPRGQ86SM5 289 aa24.71■■□□□ 1.55
PVT1-219ENST00000523427 PSMF1Q92530 271 aa24.71■■□□□ 1.55
PVT1-219ENST00000523427 RAD51AP1Q96B01 352 aa24.71■■□□□ 1.55
PVT1-219ENST00000523427 CABS1Q96KC9 395 aa24.71■■□□□ 1.55
PVT1-219ENST00000523427 TRIM56Q9BRZ2 755 aaKnown RBP24.71■■□□□ 1.55
PVT1-219ENST00000523427 ACAT2Q9BWD1 397 aa24.71■■□□□ 1.55
PVT1-219ENST00000523427 TRPC4Q9UBN4 977 aa24.71■■□□□ 1.55
PVT1-219ENST00000523427 ANAPC5Q9UJX4 755 aa24.71■■□□□ 1.55
PVT1-219ENST00000523427 PRICKLE3O43900 615 aaPredicted RBP24.7■■□□□ 1.54
PVT1-219ENST00000523427 WFS1O76024 890 aa24.7■■□□□ 1.54
PVT1-219ENST00000523427 AOAHP28039 575 aa24.7■■□□□ 1.54
PVT1-219ENST00000523427 MUM1Q2TAK8 710 aa24.7■■□□□ 1.54
PVT1-219ENST00000523427 PRMT9Q6P2P2 845 aa24.7■■□□□ 1.54
PVT1-219ENST00000523427 CCDC170Q8IYT3 715 aa24.7■■□□□ 1.54
PVT1-219ENST00000523427 OR2L3Q8NG85 312 aa24.7■■□□□ 1.54
PVT1-219ENST00000523427 CCDC120Q96HB5 630 aa24.7■■□□□ 1.54
PVT1-219ENST00000523427 RAB11FIP5Q9BXF6 653 aa24.7■■□□□ 1.54
PVT1-219ENST00000523427 ITGB1BP2Q9UKP3 347 aa24.7■■□□□ 1.54
PVT1-219ENST00000523427 PACSIN2Q9UNF0 486 aaPredicted RBP24.7■■□□□ 1.54
PVT1-219ENST00000523427 SLCO2B1O94956 709 aa24.69■■□□□ 1.54
PVT1-219ENST00000523427 HTR1EP28566 365 aa24.69■■□□□ 1.54
PVT1-219ENST00000523427 PPARGP37231 505 aaPredicted RBP24.69■■□□□ 1.54
PVT1-219ENST00000523427 RAB42Q8N4Z0 105 aa24.69■■□□□ 1.54
PVT1-219ENST00000523427 ETNK1Q9HBU6 452 aa24.69■■□□□ 1.54
PVT1-219ENST00000523427 SEC14L3Q9UDX4 400 aa24.69■■□□□ 1.54
PVT1-219ENST00000523427 F8P00451 2351 aa24.69■■□□□ 1.54
PVT1-219ENST00000523427 C2CD3Q4AC94 2353 aa24.69■■□□□ 1.54
PVT1-219ENST00000523427 PKDREJQ9NTG1 2253 aa24.68■■□□□ 1.54
PVT1-219ENST00000523427 TCRBV7S2A1N4TA0A589 114 aa24.68■■□□□ 1.54
PVT1-219ENST00000523427 IDSB3KWA1 339 aa24.68■■□□□ 1.54
PVT1-219ENST00000523427 E7EVH7 732 aa24.68■■□□□ 1.54
PVT1-219ENST00000523427 C1orf105O95561 183 aa24.68■■□□□ 1.54
PVT1-219ENST00000523427 SERPINA7P05543 415 aa24.68■■□□□ 1.54
PVT1-219ENST00000523427 ADRA1DP25100 572 aa24.68■■□□□ 1.54
PVT1-219ENST00000523427 MST1P26927 711 aa24.68■■□□□ 1.54
PVT1-219ENST00000523427 SOX11P35716 441 aa24.68■■□□□ 1.54
PVT1-219ENST00000523427 TSTA3Q13630 321 aaPredicted RBP24.68■■□□□ 1.54
PVT1-219ENST00000523427 GDF7Q7Z4P5 450 aa24.68■■□□□ 1.54
PVT1-219ENST00000523427 HAS2Q92819 552 aa24.68■■□□□ 1.54
PVT1-219ENST00000523427 C10orf90Q96M02 699 aa24.68■■□□□ 1.54
PVT1-219ENST00000523427 TSPY26PQ9H489 355 aa24.68■■□□□ 1.54
PVT1-219ENST00000523427 MARCH4Q9P2E8 410 aaPredicted RBP24.68■■□□□ 1.54
PVT1-219ENST00000523427 MRPS2Q9Y399 296 aaKnown RBP24.68■■□□□ 1.54
PVT1-219ENST00000523427 EPN1Q9Y6I3 576 aaPredicted RBP24.68■■□□□ 1.54
PVT1-219ENST00000523427 FBN2P35556 2912 aa24.68■■□□□ 1.54
PVT1-219ENST00000523427 SOWAHDA6NJG2 315 aa24.67■■□□□ 1.54
PVT1-219ENST00000523427 PRMT5O14744 637 aaPredicted RBP24.67■■□□□ 1.54
PVT1-219ENST00000523427 RASAL1O95294 804 aa24.67■■□□□ 1.54
PVT1-219ENST00000523427 FKBP9O95302 570 aa24.67■■□□□ 1.54
PVT1-219ENST00000523427 WDPCPO95876 746 aa24.67■■□□□ 1.54
PVT1-219ENST00000523427 HEXBP07686 556 aa24.67■■□□□ 1.54
PVT1-219ENST00000523427 FASTKQ14296 549 aaKnown RBP24.67■■□□□ 1.54
PVT1-219ENST00000523427 OR2A1Q8NGT9 310 aa24.67■■□□□ 1.54
PVT1-219ENST00000523427 SLC35B2Q8TB61 432 aa24.67■■□□□ 1.54
PVT1-219ENST00000523427 ATG4AQ8WYN0 398 aa24.67■■□□□ 1.54
PVT1-219ENST00000523427 DPH7Q9BTV6 452 aa24.67■■□□□ 1.54
PVT1-219ENST00000523427 CATSPERZQ9NTU4 200 aa24.67■■□□□ 1.54
PVT1-219ENST00000523427 AMFRQ9UKV5 643 aa24.67■■□□□ 1.54
PVT1-219ENST00000523427 KLF2Q9Y5W3 355 aaPredicted RBP24.67■■□□□ 1.54
PVT1-219ENST00000523427 PDZD2O15018 2839 aa24.67■■□□□ 1.54
PVT1-219ENST00000523427 GRID2IPA4D2P6 1211 aa24.66■■□□□ 1.54
PVT1-219ENST00000523427 H0YGG7 62 aa24.66■■□□□ 1.54
PVT1-219ENST00000523427 BMP10O95393 424 aa24.66■■□□□ 1.54
PVT1-219ENST00000523427 IFNB1P01574 187 aa24.66■■□□□ 1.54
PVT1-219ENST00000523427 COX6B1P14854 86 aa24.66■■□□□ 1.54
PVT1-219ENST00000523427 ARF3P61204 181 aaPredicted RBP24.66■■□□□ 1.54
PVT1-219ENST00000523427 FBXO42Q6P3S6 717 aa24.66■■□□□ 1.54
PVT1-219ENST00000523427 RNF44Q7L0R7 432 aa24.66■■□□□ 1.54
PVT1-219ENST00000523427 OTOAQ7RTW8 1153 aa24.66■■□□□ 1.54
PVT1-219ENST00000523427 PEX26Q7Z412 305 aa24.66■■□□□ 1.54
PVT1-219ENST00000523427 PRUNE1Q86TP1 453 aa24.66■■□□□ 1.54
PVT1-219ENST00000523427 SUN3Q8TAQ9 357 aa24.66■■□□□ 1.54
PVT1-219ENST00000523427 ZFYVE21Q9BQ24 234 aa24.66■■□□□ 1.54
PVT1-219ENST00000523427 LACRTQ9GZZ8 138 aa24.66■■□□□ 1.54
PVT1-219ENST00000523427 CDC14AQ9UNH5 594 aa24.66■■□□□ 1.54
PVT1-219ENST00000523427 TCAF1Q9Y4C2 921 aa24.66■■□□□ 1.54
PVT1-219ENST00000523427 IGHV1-45A0A0A0MS14 117 aa24.65■■□□□ 1.54
PVT1-219ENST00000523427 IPO7O95373 1038 aaKnown RBP24.65■■□□□ 1.54
PVT1-219ENST00000523427 ITGAMP11215 1152 aa24.65■■□□□ 1.54
PVT1-219ENST00000523427 FDXRP22570 491 aa24.65■■□□□ 1.54
PVT1-219ENST00000523427 CMPK1P30085 196 aa24.65■■□□□ 1.54
PVT1-219ENST00000523427 PMP22Q01453 160 aa24.65■■□□□ 1.54
PVT1-219ENST00000523427 INAQ16352 499 aa24.65■■□□□ 1.54
PVT1-219ENST00000523427 AARS2Q5JTZ9 985 aaKnown RBP24.65■■□□□ 1.54
PVT1-219ENST00000523427 HIBCHQ6NVY1 386 aaPredicted RBP24.65■■□□□ 1.54
PVT1-219ENST00000523427 ZNF808Q8N4W9 903 aaPredicted RBP24.65■■□□□ 1.54
PVT1-219ENST00000523427 UBL4BQ8N7F7 174 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms