RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 PMS2P1A4D2B8 440 aa11.51□□□□□ -0.57
PVT1-215ENST00000522963 OR5K3A6NET4 321 aa11.51□□□□□ -0.57
PVT1-215ENST00000522963 ZNF839A8K0R7 811 aa11.51□□□□□ -0.57
PVT1-215ENST00000522963 TMX2-CTNND1H3BSU7 103 aa11.51□□□□□ -0.57
PVT1-215ENST00000522963 STK16O75716 305 aa11.51□□□□□ -0.57
PVT1-215ENST00000522963 UBXN7O94888 489 aa11.51□□□□□ -0.57
PVT1-215ENST00000522963 CHRM5P08912 532 aaPredicted RBP11.51□□□□□ -0.57
PVT1-215ENST00000522963 HGFP14210 728 aa11.51□□□□□ -0.57
PVT1-215ENST00000522963 CHN1P15882 459 aa11.51□□□□□ -0.57
PVT1-215ENST00000522963 POLR2CP19387 275 aaPredicted RBP11.51□□□□□ -0.57
PVT1-215ENST00000522963 EEF1DP29692 281 aaKnown RBP11.51□□□□□ -0.57
PVT1-215ENST00000522963 CSF2RBP32927 897 aa11.51□□□□□ -0.57
PVT1-215ENST00000522963 ATP1A2P50993 1020 aa11.51□□□□□ -0.57
PVT1-215ENST00000522963 EPHA4P54764 986 aa11.51□□□□□ -0.57
PVT1-215ENST00000522963 DNAJB13P59910 316 aa11.51□□□□□ -0.57
PVT1-215ENST00000522963 TBPL1P62380 186 aa11.51□□□□□ -0.57
PVT1-215ENST00000522963 GPLD1P80108 840 aa11.51□□□□□ -0.57
PVT1-215ENST00000522963 TSTA3Q13630 321 aaPredicted RBP11.51□□□□□ -0.57
PVT1-215ENST00000522963 PCBP2Q15366 365 aaKnown RBP eCLIP11.51□□□□□ -0.573e-6■■■□□ 19
PVT1-215ENST00000522963 HHATQ5VTY9 493 aa11.51□□□□□ -0.57
PVT1-215ENST00000522963 RPS27LQ71UM5 84 aaKnown RBP11.51□□□□□ -0.57
PVT1-215ENST00000522963 WDR36Q8NI36 951 aaKnown RBP11.51□□□□□ -0.57
PVT1-215ENST00000522963 MOCOSQ96EN8 888 aa11.51□□□□□ -0.57
PVT1-215ENST00000522963 MED8Q96G25 268 aa11.51□□□□□ -0.57
PVT1-215ENST00000522963 CCDC74BQ96LY2 380 aa11.51□□□□□ -0.57
PVT1-215ENST00000522963 TMEM237Q96Q45 408 aa11.51□□□□□ -0.57
PVT1-215ENST00000522963 PAIP2Q9BPZ3 127 aaKnown RBP11.51□□□□□ -0.57
PVT1-215ENST00000522963 SGPP1Q9BX95 441 aa11.51□□□□□ -0.57
PVT1-215ENST00000522963 CD244Q9BZW8 370 aa11.51□□□□□ -0.57
PVT1-215ENST00000522963 NRSN2Q9GZP1 204 aa11.51□□□□□ -0.57
PVT1-215ENST00000522963 CNOT10Q9H9A5 744 aaKnown RBP11.51□□□□□ -0.57
PVT1-215ENST00000522963 POLR1BQ9H9Y6 1135 aa11.51□□□□□ -0.57
PVT1-215ENST00000522963 CCDC177Q9NQR7 707 aaPredicted RBP11.51□□□□□ -0.57
PVT1-215ENST00000522963 INTS7Q9NVH2 962 aaKnown RBP11.51□□□□□ -0.57
PVT1-215ENST00000522963 WDR70Q9NW82 654 aa11.51□□□□□ -0.57
PVT1-215ENST00000522963 HRASLS2Q9NWW9 162 aa11.51□□□□□ -0.57
PVT1-215ENST00000522963 FAM53CQ9NYF3 392 aa11.51□□□□□ -0.57
PVT1-215ENST00000522963 PISDQ9UG56 409 aa11.51□□□□□ -0.57
PVT1-215ENST00000522963 AKAP13Q12802 2813 aa11.5□□□□□ -0.57
PVT1-215ENST00000522963 IGHV5-10-1A0A0J9YXX1 117 aa11.5□□□□□ -0.57
PVT1-215ENST00000522963 PIPSLA2A3N6 862 aa11.5□□□□□ -0.57
PVT1-215ENST00000522963 BIRC5O15392 142 aa11.5□□□□□ -0.57
PVT1-215ENST00000522963 PRICKLE3O43900 615 aaPredicted RBP11.5□□□□□ -0.57
PVT1-215ENST00000522963 BRINP1O60477 761 aa11.5□□□□□ -0.57
PVT1-215ENST00000522963 CCNT2O60583 730 aaKnown RBP11.5□□□□□ -0.57
PVT1-215ENST00000522963 TRIM13O60858 407 aa11.5□□□□□ -0.57
PVT1-215ENST00000522963 WDR47O94967 919 aa11.5□□□□□ -0.57
PVT1-215ENST00000522963 RPS17P08708 135 aaKnown RBP11.5□□□□□ -0.57
PVT1-215ENST00000522963 JMJD7P0C870 316 aa11.5□□□□□ -0.57
PVT1-215ENST00000522963 IMPDH1P20839 514 aa11.5□□□□□ -0.57
PVT1-215ENST00000522963 PSMB5P28074 263 aa11.5□□□□□ -0.57
PVT1-215ENST00000522963 RBMS1P29558 406 aaKnown RBP11.5□□□□□ -0.57
PVT1-215ENST00000522963 OAS2P29728 719 aaKnown RBP11.5□□□□□ -0.57
PVT1-215ENST00000522963 CAPZBP47756 277 aa11.5□□□□□ -0.57
PVT1-215ENST00000522963 MAPK10P53779 464 aa11.5□□□□□ -0.57
PVT1-215ENST00000522963 PPP1CAP62136 330 aa11.5□□□□□ -0.57
PVT1-215ENST00000522963 HERVK_113P63132 956 aa11.5□□□□□ -0.57
PVT1-215ENST00000522963 CFHR1Q03591 330 aa11.5□□□□□ -0.57
PVT1-215ENST00000522963 UNC50Q53HI1 259 aa11.5□□□□□ -0.57
PVT1-215ENST00000522963 ZNF678Q5SXM1 525 aa11.5□□□□□ -0.57
PVT1-215ENST00000522963 LIPMQ5VYY2 423 aa11.5□□□□□ -0.57
PVT1-215ENST00000522963 CAPN13Q6MZZ7 669 aaPredicted RBP11.5□□□□□ -0.57
PVT1-215ENST00000522963 ZNF574Q6ZN55 896 aaPredicted RBP11.5□□□□□ -0.57
PVT1-215ENST00000522963 RAB11FIP2Q7L804 512 aa11.5□□□□□ -0.57
PVT1-215ENST00000522963 THOC6Q86W42 341 aaKnown RBP11.5□□□□□ -0.57
PVT1-215ENST00000522963 OOSP2Q86WS3 158 aa11.5□□□□□ -0.57
PVT1-215ENST00000522963 NUDCD3Q8IVD9 361 aa11.5□□□□□ -0.57
PVT1-215ENST00000522963 FLVCR1-AS1Q8TAF5 88 aa11.5□□□□□ -0.57
PVT1-215ENST00000522963 CCDC126Q96EE4 140 aa11.5□□□□□ -0.57
PVT1-215ENST00000522963 L3HYPDHQ96EM0 354 aa11.5□□□□□ -0.57
PVT1-215ENST00000522963 NSUN5Q96P11 429 aaKnown RBP11.5□□□□□ -0.57
PVT1-215ENST00000522963 OR4K3Q96R72 315 aa11.5□□□□□ -0.57
PVT1-215ENST00000522963 GATA5Q9BWX5 397 aaPredicted RBP11.5□□□□□ -0.57
PVT1-215ENST00000522963 C1QTNF3Q9BXJ4 246 aa11.5□□□□□ -0.57
PVT1-215ENST00000522963 ERVK-6Q9BXR3 956 aa11.5□□□□□ -0.57
PVT1-215ENST00000522963 PITPNM3Q9BZ71 974 aa11.5□□□□□ -0.57
PVT1-215ENST00000522963 ABCF3Q9NUQ8 709 aa11.5□□□□□ -0.57
PVT1-215ENST00000522963 ACTR10Q9NZ32 417 aa11.5□□□□□ -0.57
PVT1-215ENST00000522963 AKAP7Q9P0M2 348 aaPredicted RBP11.5□□□□□ -0.57
PVT1-215ENST00000522963 ZMIZ1Q9ULJ6 1067 aa11.5□□□□□ -0.57
PVT1-215ENST00000522963 SLC22A14Q9Y267 594 aa11.5□□□□□ -0.57
PVT1-215ENST00000522963 LOXL2Q9Y4K0 774 aa11.5□□□□□ -0.57
PVT1-215ENST00000522963 TNPO3Q9Y5L0 923 aaKnown RBP11.5□□□□□ -0.57
PVT1-215ENST00000522963 A0A1W2PNU3 283 aaPredicted RBP11.49□□□□□ -0.57
PVT1-215ENST00000522963 GSAPA4D1B5 854 aa11.49□□□□□ -0.57
PVT1-215ENST00000522963 TMEM8BA6NDV4 472 aa11.49□□□□□ -0.57
PVT1-215ENST00000522963 ISM1B1AKI9 464 aa11.49□□□□□ -0.57
PVT1-215ENST00000522963 K7EPI3 171 aa11.49□□□□□ -0.57
PVT1-215ENST00000522963 E2F3O00716 465 aa11.49□□□□□ -0.57
PVT1-215ENST00000522963 TNFSF15O95150 251 aa11.49□□□□□ -0.57
PVT1-215ENST00000522963 FGF3P11487 239 aaPredicted RBP11.49□□□□□ -0.57
PVT1-215ENST00000522963 UGT2B7P16662 529 aa11.49□□□□□ -0.57
PVT1-215ENST00000522963 NPPBP16860 134 aa11.49□□□□□ -0.57
PVT1-215ENST00000522963 EPORP19235 508 aa11.49□□□□□ -0.57
PVT1-215ENST00000522963 ITIH1P19827 911 aa11.49□□□□□ -0.57
PVT1-215ENST00000522963 CCKBRP32239 447 aa11.49□□□□□ -0.57
PVT1-215ENST00000522963 LSSP48449 732 aa11.49□□□□□ -0.57
PVT1-215ENST00000522963 NAGLUP54802 743 aa11.49□□□□□ -0.57
PVT1-215ENST00000522963 GFERP55789 205 aa11.49□□□□□ -0.57
PVT1-215ENST00000522963 YBX1P67809 324 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms