RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 UBE2E3Q969T4 207 aa9.87□□□□□ -0.83
MCF2-209ENST00000520602 RAD51AP1Q96B01 352 aa9.87□□□□□ -0.83
MCF2-209ENST00000520602 CMTM7Q96FZ5 175 aa9.87□□□□□ -0.83
MCF2-209ENST00000520602 IL17FQ96PD4 163 aa9.87□□□□□ -0.83
MCF2-209ENST00000520602 CAPN10Q9HC96 672 aa9.87□□□□□ -0.83
MCF2-209ENST00000520602 SMOXQ9NWM0 555 aa9.87□□□□□ -0.83
MCF2-209ENST00000520602 ZDHHC7Q9NXF8 308 aa9.87□□□□□ -0.83
MCF2-209ENST00000520602 PDP1Q9P0J1 537 aaPredicted RBP9.87□□□□□ -0.83
MCF2-209ENST00000520602 DNAJB9Q9UBS3 223 aa9.87□□□□□ -0.83
MCF2-209ENST00000520602 DMTF1Q9Y222 760 aa9.87□□□□□ -0.83
MCF2-209ENST00000520602 GMPPBQ9Y5P6 360 aa9.87□□□□□ -0.83
MCF2-209ENST00000520602 FAM20BO75063 409 aa9.86□□□□□ -0.83
MCF2-209ENST00000520602 STATHP02808 62 aa9.86□□□□□ -0.83
MCF2-209ENST00000520602 MYOGP15173 224 aa9.86□□□□□ -0.83
MCF2-209ENST00000520602 CSNK1DP48730 415 aa9.86□□□□□ -0.83
MCF2-209ENST00000520602 DAG1Q14118 895 aa9.86□□□□□ -0.83
MCF2-209ENST00000520602 SKIV2LQ15477 1246 aaKnown RBP9.86□□□□□ -0.83
MCF2-209ENST00000520602 ANXA8L1Q5VT79 327 aa9.86□□□□□ -0.83
MCF2-209ENST00000520602 FBXO46Q6PJ61 603 aaPredicted RBP9.86□□□□□ -0.83
MCF2-209ENST00000520602 Q6ZNB5 142 aa9.86□□□□□ -0.83
MCF2-209ENST00000520602 FAM43BQ6ZT52 329 aaPredicted RBP9.86□□□□□ -0.83
MCF2-209ENST00000520602 ADGRG5Q8IZF4 528 aa9.86□□□□□ -0.83
MCF2-209ENST00000520602 LILRA3Q8N6C8 439 aaPredicted RBP9.86□□□□□ -0.83
MCF2-209ENST00000520602 ISG20Q96AZ6 181 aaKnown RBP9.86□□□□□ -0.83
MCF2-209ENST00000520602 OTUB2Q96DC9 234 aa9.86□□□□□ -0.83
MCF2-209ENST00000520602 ZSWIM3Q96MP5 696 aa9.86□□□□□ -0.83
MCF2-209ENST00000520602 INPP5KQ9BT40 448 aa9.86□□□□□ -0.83
MCF2-209ENST00000520602 NLNQ9BYT8 704 aa9.86□□□□□ -0.83
MCF2-209ENST00000520602 ACPTQ9BZG2 426 aa9.86□□□□□ -0.83
MCF2-209ENST00000520602 ZNF385DQ9H6B1 395 aa9.86□□□□□ -0.83
MCF2-209ENST00000520602 SLC28A3Q9HAS3 691 aa9.86□□□□□ -0.83
MCF2-209ENST00000520602 RWDD3Q9Y3V2 267 aa9.86□□□□□ -0.83
MCF2-209ENST00000520602 HCFC2Q9Y5Z7 792 aa9.86□□□□□ -0.83
MCF2-209ENST00000520602 E7EQ34 232 aa9.86□□□□□ -0.83
MCF2-209ENST00000520602 NPPAP01160 153 aa9.86□□□□□ -0.83
MCF2-209ENST00000520602 OPN1SWP03999 348 aa9.86□□□□□ -0.83
MCF2-209ENST00000520602 CA3P07451 260 aa9.86□□□□□ -0.83
MCF2-209ENST00000520602 ACP5P13686 325 aa9.86□□□□□ -0.83
MCF2-209ENST00000520602 AOAHP28039 575 aa9.86□□□□□ -0.83
MCF2-209ENST00000520602 LSM3P62310 102 aaKnown RBP9.86□□□□□ -0.83
MCF2-209ENST00000520602 COQ5Q5HYK3 327 aa9.86□□□□□ -0.83
MCF2-209ENST00000520602 FGD3Q5JSP0 725 aa9.86□□□□□ -0.83
MCF2-209ENST00000520602 PPP4R4Q6NUP7 873 aa9.86□□□□□ -0.83
MCF2-209ENST00000520602 ENPP6Q6UWR7 440 aa9.86□□□□□ -0.83
MCF2-209ENST00000520602 HDDC3Q8N4P3 179 aa9.86□□□□□ -0.83
MCF2-209ENST00000520602 OR5AK3PQ8NH89 298 aa9.86□□□□□ -0.83
MCF2-209ENST00000520602 CPEB1Q9BZB8 566 aaKnown RBP9.86□□□□□ -0.83
MCF2-209ENST00000520602 OR51B4Q9Y5P0 310 aa9.86□□□□□ -0.83
MCF2-209ENST00000520602 MAN1A2O60476 641 aa9.86□□□□□ -0.83
MCF2-209ENST00000520602 RSL1D1O76021 490 aaKnown RBP9.86□□□□□ -0.83
MCF2-209ENST00000520602 KLK1P06870 262 aa9.86□□□□□ -0.83
MCF2-209ENST00000520602 ACADMP11310 421 aa9.86□□□□□ -0.83
MCF2-209ENST00000520602 DDX5P17844 614 aaKnown RBP9.86□□□□□ -0.83
MCF2-209ENST00000520602 TACR1P25103 407 aa9.86□□□□□ -0.83
MCF2-209ENST00000520602 PDHA2P29803 388 aa9.86□□□□□ -0.83
MCF2-209ENST00000520602 SLC6A11P48066 632 aa9.86□□□□□ -0.83
MCF2-209ENST00000520602 CLK1P49759 484 aaKnown RBP9.86□□□□□ -0.83
MCF2-209ENST00000520602 MANFP55145 182 aaKnown RBP9.86□□□□□ -0.83
MCF2-209ENST00000520602 PDGFRLQ15198 375 aa9.86□□□□□ -0.83
MCF2-209ENST00000520602 IER5LQ5T953 404 aa9.86□□□□□ -0.83
MCF2-209ENST00000520602 BROXQ5VW32 411 aa9.86□□□□□ -0.83
MCF2-209ENST00000520602 UGT2A3Q6UWM9 527 aa9.86□□□□□ -0.83
MCF2-209ENST00000520602 VITQ6UXI7 678 aa9.86□□□□□ -0.83
MCF2-209ENST00000520602 THAP5Q7Z6K1 395 aa9.86□□□□□ -0.83
MCF2-209ENST00000520602 TRIM48Q8IWZ4 208 aa9.86□□□□□ -0.83
MCF2-209ENST00000520602 CPA6Q8N4T0 437 aa9.86□□□□□ -0.83
MCF2-209ENST00000520602 TMEM102Q8N9M5 508 aaPredicted RBP9.86□□□□□ -0.83
MCF2-209ENST00000520602 HMGCLL1Q8TB92 370 aa9.86□□□□□ -0.83
MCF2-209ENST00000520602 BBS4Q96RK4 519 aa9.86□□□□□ -0.83
MCF2-209ENST00000520602 CD300AQ9UGN4 299 aa9.86□□□□□ -0.83
MCF2-209ENST00000520602 ZNF225Q9UK10 706 aa9.86□□□□□ -0.83
MCF2-209ENST00000520602 PCDHB3Q9Y5E6 796 aa9.86□□□□□ -0.83
MCF2-209ENST00000520602 PCDHB14Q9Y5E9 798 aa9.86□□□□□ -0.83
MCF2-209ENST00000520602 MAGED1Q9Y5V3 778 aaPredicted RBP9.86□□□□□ -0.83
MCF2-209ENST00000520602 HEPACAM2A8MVW5 462 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 PAK4O96013 591 aaPredicted RBP9.85□□□□□ -0.83
MCF2-209ENST00000520602 IFNA14P01570 189 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 APODP05090 189 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 GNAO1P09471 354 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 IGFBP5P24593 272 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 ITGB8P26012 769 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 TIE1P35590 1138 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 PLA2G16P53816 162 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 C16orf72Q14CZ0 275 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 KIAA1324Q6UXG2 1013 aaKnown RBP9.85□□□□□ -0.83
MCF2-209ENST00000520602 FAM110BQ8TC76 370 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 ADAMTS19Q8TE59 1207 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 ASB11Q8WXH4 323 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 TFGQ92734 400 aaPredicted RBP9.85□□□□□ -0.83
MCF2-209ENST00000520602 OTULINQ96BN8 352 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 APOL4Q9BPW4 351 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 RBM4BQ9BQ04 359 aaKnown RBP9.85□□□□□ -0.83
MCF2-209ENST00000520602 DPH2Q9BQC3 489 aaPredicted RBP9.85□□□□□ -0.83
MCF2-209ENST00000520602 RBM4Q9BWF3 364 aaKnown RBP9.85□□□□□ -0.83
MCF2-209ENST00000520602 CLCA2Q9UQC9 943 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 EDDM13A0A1B0GTR0 161 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 ARHGEF33A8MVX0 844 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 AP2A2O94973 939 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 GDI1P31150 447 aa9.85□□□□□ -0.83
MCF2-209ENST00000520602 CLCNKAP51800 687 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms