RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 GPR135Q8IZ08 494 aa21.12■□□□□ 0.97
VEGFA-217ENST00000518538 UHMK1Q8TAS1 419 aaKnown RBP21.12■□□□□ 0.97
VEGFA-217ENST00000518538 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.12■□□□□ 0.975e-12■■■■□ 26.6
VEGFA-217ENST00000518538 UBXN10Q96LJ8 280 aa21.12■□□□□ 0.97
VEGFA-217ENST00000518538 DPH7Q9BTV6 452 aa21.12■□□□□ 0.97
VEGFA-217ENST00000518538 ATG10Q9H0Y0 220 aa21.12■□□□□ 0.97
VEGFA-217ENST00000518538 ABCF3Q9NUQ8 709 aa21.12■□□□□ 0.97
VEGFA-217ENST00000518538 UTP6Q9NYH9 597 aaKnown RBP21.12■□□□□ 0.97
VEGFA-217ENST00000518538 EURLQ9NYK6 297 aa21.12■□□□□ 0.97
VEGFA-217ENST00000518538 IKBKGQ9Y6K9 419 aa21.12■□□□□ 0.97
VEGFA-217ENST00000518538 OR2A25A4D2G3 310 aa21.11■□□□□ 0.97
VEGFA-217ENST00000518538 H3BMH7 237 aa21.11■□□□□ 0.97
VEGFA-217ENST00000518538 OR2B3O76000 313 aa21.11■□□□□ 0.97
VEGFA-217ENST00000518538 GUCA1CO95843 209 aa21.11■□□□□ 0.97
VEGFA-217ENST00000518538 NTRK1P04629 796 aa21.11■□□□□ 0.97
VEGFA-217ENST00000518538 CD1DP15813 335 aa21.11■□□□□ 0.97
VEGFA-217ENST00000518538 STAT5AP42229 794 aa21.11■□□□□ 0.97
VEGFA-217ENST00000518538 SERPINB9P50453 376 aa21.11■□□□□ 0.97
VEGFA-217ENST00000518538 TMPRSS3P57727 454 aa21.11■□□□□ 0.97
VEGFA-217ENST00000518538 NAE1Q13564 534 aa21.11■□□□□ 0.97
VEGFA-217ENST00000518538 CSHL1Q14406 222 aa21.11■□□□□ 0.97
VEGFA-217ENST00000518538 TSNQ15631 228 aaKnown RBP21.11■□□□□ 0.97
VEGFA-217ENST00000518538 PRAMEF17Q5VTA0 474 aa21.11■□□□□ 0.97
VEGFA-217ENST00000518538 PRAMEF13Q5VWM6 474 aa21.11■□□□□ 0.97
VEGFA-217ENST00000518538 FRA10AC1Q70Z53 315 aa21.11■□□□□ 0.97
VEGFA-217ENST00000518538 TAOK1Q7L7X3 1001 aa21.11■□□□□ 0.97
VEGFA-217ENST00000518538 VASH2Q86V25 355 aa21.11■□□□□ 0.97
VEGFA-217ENST00000518538 MCATQ8IVS2 390 aaKnown RBP21.11■□□□□ 0.97
VEGFA-217ENST00000518538 SPATA6LQ8N4H0 392 aa21.11■□□□□ 0.97
VEGFA-217ENST00000518538 MED8Q96G25 268 aa21.11■□□□□ 0.97
VEGFA-217ENST00000518538 PLCD4Q9BRC7 762 aa21.11■□□□□ 0.97
VEGFA-217ENST00000518538 SGPP1Q9BX95 441 aa21.11■□□□□ 0.97
VEGFA-217ENST00000518538 UNKQ9C0B0 810 aaKnown RBP21.11■□□□□ 0.97
VEGFA-217ENST00000518538 ZNF180Q9UJW8 692 aa21.11■□□□□ 0.97
VEGFA-217ENST00000518538 AHCTF1Q8WYP5 2266 aa21.11■□□□□ 0.97
VEGFA-217ENST00000518538 CELSR3Q9NYQ7 3312 aa21.11■□□□□ 0.97
VEGFA-217ENST00000518538 IGKV1-8A0A0C4DH67 115 aa21.1■□□□□ 0.97
VEGFA-217ENST00000518538 POC1B-GALNT4F8VUJ3 575 aa21.1■□□□□ 0.97
VEGFA-217ENST00000518538 CTSVO60911 334 aa21.1■□□□□ 0.97
VEGFA-217ENST00000518538 SLC26A3P40879 764 aa21.1■□□□□ 0.97
VEGFA-217ENST00000518538 MSH2P43246 934 aa21.1■□□□□ 0.97
VEGFA-217ENST00000518538 CSRP3P50461 194 aa21.1■□□□□ 0.97
VEGFA-217ENST00000518538 SRSF6Q13247 344 aaKnown RBP21.1■□□□□ 0.97
VEGFA-217ENST00000518538 ZXDCQ2QGD7 858 aaPredicted RBP21.1■□□□□ 0.97
VEGFA-217ENST00000518538 COL28A1Q2UY09 1125 aa21.1■□□□□ 0.97
VEGFA-217ENST00000518538 ZNF425Q6IV72 752 aa21.1■□□□□ 0.97
VEGFA-217ENST00000518538 CAPN13Q6MZZ7 669 aaPredicted RBP21.1■□□□□ 0.97
VEGFA-217ENST00000518538 TLDC1Q6P9B6 456 aa21.1■□□□□ 0.97
VEGFA-217ENST00000518538 RNF44Q7L0R7 432 aa21.1■□□□□ 0.97
VEGFA-217ENST00000518538 TBC1D1Q86TI0 1168 aaPredicted RBP21.1■□□□□ 0.97
VEGFA-217ENST00000518538 OR56A3Q8NH54 315 aa21.1■□□□□ 0.97
VEGFA-217ENST00000518538 LRFN5Q96NI6 719 aa21.1■□□□□ 0.97
VEGFA-217ENST00000518538 SPRTNQ9H040 489 aaPredicted RBP21.1■□□□□ 0.97
VEGFA-217ENST00000518538 ACTR5Q9H9F9 607 aaPredicted RBP21.1■□□□□ 0.97
VEGFA-217ENST00000518538 SNX15Q9NRS6 342 aa21.1■□□□□ 0.97
VEGFA-217ENST00000518538 AP1M2Q9Y6Q5 423 aa21.1■□□□□ 0.97
VEGFA-217ENST00000518538 EPG5Q9HCE0 2579 aa21.1■□□□□ 0.97
VEGFA-217ENST00000518538 ANKRD11Q6UB99 2663 aaPredicted RBP21.1■□□□□ 0.97
VEGFA-217ENST00000518538 A0A087X1B8 175 aa21.09■□□□□ 0.97
VEGFA-217ENST00000518538 EXOC1LA0A1B0GW35 172 aa21.09■□□□□ 0.97
VEGFA-217ENST00000518538 ZSCAN9O15535 394 aaPredicted RBP21.09■□□□□ 0.97
VEGFA-217ENST00000518538 ZNF749O43361 778 aa21.09■□□□□ 0.97
VEGFA-217ENST00000518538 NRP2O60462 931 aa21.09■□□□□ 0.97
VEGFA-217ENST00000518538 ANXA5P08758 320 aa21.09■□□□□ 0.97
VEGFA-217ENST00000518538 HBQ1P09105 142 aa21.09■□□□□ 0.97
VEGFA-217ENST00000518538 CCNYL3P0C7X3 344 aa21.09■□□□□ 0.97
VEGFA-217ENST00000518538 CNTFP26441 200 aa21.09■□□□□ 0.97
VEGFA-217ENST00000518538 SERPINB8P50452 374 aa21.09■□□□□ 0.97
VEGFA-217ENST00000518538 LCTLQ6UWM7 567 aa21.09■□□□□ 0.97
VEGFA-217ENST00000518538 CCDC81Q6ZN84 652 aa21.09■□□□□ 0.97
VEGFA-217ENST00000518538 PAQR7Q86WK9 346 aa21.09■□□□□ 0.97
VEGFA-217ENST00000518538 DCAKDQ8WVC6 231 aa21.09■□□□□ 0.97
VEGFA-217ENST00000518538 KIAA1191Q96A73 305 aa21.09■□□□□ 0.97
VEGFA-217ENST00000518538 KIAA1143Q96AT1 154 aaPredicted RBP21.09■□□□□ 0.97
VEGFA-217ENST00000518538 ALKBH8Q96BT7 664 aaKnown RBP21.09■□□□□ 0.97
VEGFA-217ENST00000518538 ZFYVE21Q9BQ24 234 aa21.09■□□□□ 0.97
VEGFA-217ENST00000518538 CPNE5Q9HCH3 593 aa21.09■□□□□ 0.97
VEGFA-217ENST00000518538 LHX9Q9NQ69 397 aa21.09■□□□□ 0.97
VEGFA-217ENST00000518538 IRAK4Q9NWZ3 460 aa21.09■□□□□ 0.97
VEGFA-217ENST00000518538 PADI1Q9ULC6 663 aa21.09■□□□□ 0.97
VEGFA-217ENST00000518538 SNX7Q9UNH6 387 aa21.09■□□□□ 0.97
VEGFA-217ENST00000518538 ACOT9Q9Y305 439 aa21.09■□□□□ 0.97
VEGFA-217ENST00000518538 LOC101059948A0A1B0GTJ6 334 aa21.08■□□□□ 0.97
VEGFA-217ENST00000518538 EFSO43281 561 aa21.08■□□□□ 0.97
VEGFA-217ENST00000518538 KRT38O76015 456 aa21.08■□□□□ 0.97
VEGFA-217ENST00000518538 ALDOAP04075 364 aaKnown RBP21.08■□□□□ 0.97
VEGFA-217ENST00000518538 CTSBP07858 339 aa21.08■□□□□ 0.97
VEGFA-217ENST00000518538 LTA4HP09960 611 aaKnown RBP21.08■□□□□ 0.97
VEGFA-217ENST00000518538 LIFP15018 202 aa21.08■□□□□ 0.97
VEGFA-217ENST00000518538 HRH2P25021 359 aa21.08■□□□□ 0.97
VEGFA-217ENST00000518538 GMPRP36959 345 aa21.08■□□□□ 0.97
VEGFA-217ENST00000518538 HNMTP50135 292 aa21.08■□□□□ 0.97
VEGFA-217ENST00000518538 RELAQ04206 551 aa21.08■□□□□ 0.97
VEGFA-217ENST00000518538 VAC14Q08AM6 782 aa21.08■□□□□ 0.97
VEGFA-217ENST00000518538 GPS2Q13227 327 aa21.08■□□□□ 0.97
VEGFA-217ENST00000518538 TGFBIQ15582 683 aa21.08■□□□□ 0.97
VEGFA-217ENST00000518538 TAF1BQ53T94 588 aaPredicted RBP21.08■□□□□ 0.97
VEGFA-217ENST00000518538 TCTE1Q5JU00 501 aa21.08■□□□□ 0.97
VEGFA-217ENST00000518538 SLC38A9Q8NBW4 561 aa21.08■□□□□ 0.97
VEGFA-217ENST00000518538 ISL2Q96A47 359 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms