RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 ELAVL4P26378 380 aaKnown RBP2.56□□□□□ -2
NEDD4-211ENST00000514893 OR3A2P47893 321 aa2.56□□□□□ -2
NEDD4-211ENST00000514893 RPL34P49207 117 aaKnown RBP2.56□□□□□ -2
NEDD4-211ENST00000514893 BIRC3Q13489 604 aa2.56□□□□□ -2
NEDD4-211ENST00000514893 ITGA7Q13683 1181 aa2.56□□□□□ -2
NEDD4-211ENST00000514893 TBCEQ15813 527 aaPredicted RBP2.56□□□□□ -2
NEDD4-211ENST00000514893 GARNL3Q5VVW2 1013 aa2.56□□□□□ -2
NEDD4-211ENST00000514893 TMUB2Q71RG4 321 aa2.56□□□□□ -2
NEDD4-211ENST00000514893 HEATR4Q86WZ0 1026 aa2.56□□□□□ -2
NEDD4-211ENST00000514893 FAM89BQ8N5H3 189 aa2.56□□□□□ -2
NEDD4-211ENST00000514893 OR7A2PQ8NGA2 310 aa2.56□□□□□ -2
NEDD4-211ENST00000514893 OR4D10Q8NGI6 311 aa2.56□□□□□ -2
NEDD4-211ENST00000514893 PGAM5Q96HS1 289 aa2.56□□□□□ -2
NEDD4-211ENST00000514893 C4orf45Q96LM5 186 aa2.56□□□□□ -2
NEDD4-211ENST00000514893 C2orf48Q96LS8 159 aa2.56□□□□□ -2
NEDD4-211ENST00000514893 CMTM3Q96MX0 182 aa2.56□□□□□ -2
NEDD4-211ENST00000514893 PPIL3Q9H2H8 161 aaKnown RBP2.56□□□□□ -2
NEDD4-211ENST00000514893 JMJD4Q9H9V9 463 aa2.56□□□□□ -2
NEDD4-211ENST00000514893 CLEC5AQ9NY25 188 aa2.56□□□□□ -2
NEDD4-211ENST00000514893 POGZQ7Z3K3 1410 aa2.56□□□□□ -2
NEDD4-211ENST00000514893 IQCMA0A1B0GVH7 501 aa2.55□□□□□ -2
NEDD4-211ENST00000514893 A8MZ25 164 aa2.55□□□□□ -2
NEDD4-211ENST00000514893 PRAMEF11O60813 436 aa2.55□□□□□ -2
NEDD4-211ENST00000514893 FAM200BP0CF97 657 aa2.55□□□□□ -2
NEDD4-211ENST00000514893 JAK1P23458 1154 aa2.55□□□□□ -2
NEDD4-211ENST00000514893 GABRA5P31644 462 aa2.55□□□□□ -2
NEDD4-211ENST00000514893 ELK3P41970 407 aa2.55□□□□□ -2
NEDD4-211ENST00000514893 ATP4BP51164 291 aa2.55□□□□□ -2
NEDD4-211ENST00000514893 CCR9P51686 369 aa2.55□□□□□ -2
NEDD4-211ENST00000514893 LMOD3Q0VAK6 560 aa2.55□□□□□ -2
NEDD4-211ENST00000514893 EXT1Q16394 746 aa2.55□□□□□ -2
NEDD4-211ENST00000514893 C11orf63Q6NUN7 778 aa2.55□□□□□ -2
NEDD4-211ENST00000514893 TMEM154Q6P9G4 183 aa2.55□□□□□ -2
NEDD4-211ENST00000514893 KLHL35Q6PF15 583 aa2.55□□□□□ -2
NEDD4-211ENST00000514893 TMCO3Q6UWJ1 677 aa2.55□□□□□ -2
NEDD4-211ENST00000514893 CLEC17AQ6ZS10 378 aa2.55□□□□□ -2
NEDD4-211ENST00000514893 HSCBQ8IWL3 235 aa2.55□□□□□ -2
NEDD4-211ENST00000514893 APOL2Q9BQE5 337 aa2.55□□□□□ -2
NEDD4-211ENST00000514893 KCNK15Q9H427 330 aa2.55□□□□□ -2
NEDD4-211ENST00000514893 MYOZ2Q9NPC6 264 aa2.55□□□□□ -2
NEDD4-211ENST00000514893 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.55□□□□□ -2
NEDD4-211ENST00000514893 HACL1Q9UJ83 578 aa2.55□□□□□ -2
NEDD4-211ENST00000514893 LRRFIP2Q9Y608 721 aaKnown RBP2.55□□□□□ -2
NEDD4-211ENST00000514893 A0A1W2PQ72 361 aa2.54□□□□□ -2
NEDD4-211ENST00000514893 LRRC72A6NJI9 287 aa2.54□□□□□ -2
NEDD4-211ENST00000514893 MYO1GB0I1T2 1018 aa2.54□□□□□ -2
NEDD4-211ENST00000514893 OR2T7P0C7T2 308 aa2.54□□□□□ -2
NEDD4-211ENST00000514893 VPREB1P12018 145 aa2.54□□□□□ -2
NEDD4-211ENST00000514893 GP1BBP13224 206 aa2.54□□□□□ -2
NEDD4-211ENST00000514893 RARGP13631 454 aa2.54□□□□□ -2
NEDD4-211ENST00000514893 MYOGP15173 224 aa2.54□□□□□ -2
NEDD4-211ENST00000514893 ZNF415Q09FC8 603 aa2.54□□□□□ -2
NEDD4-211ENST00000514893 SPPL2AQ8TCT8 520 aa2.54□□□□□ -2
NEDD4-211ENST00000514893 R4GN57 208 aa2.54□□□□□ -2
NEDD4-211ENST00000514893 IGHV3-38A0A0C4DH36 116 aa2.53□□□□□ -2
NEDD4-211ENST00000514893 A0A1W2PR77 199 aa2.53□□□□□ -2
NEDD4-211ENST00000514893 A6NLC8 198 aa2.53□□□□□ -2
NEDD4-211ENST00000514893 K7ENM7 598 aa2.53□□□□□ -2
NEDD4-211ENST00000514893 PDHXO00330 501 aa2.53□□□□□ -2
NEDD4-211ENST00000514893 O00370 1275 aa2.53□□□□□ -2
NEDD4-211ENST00000514893 SURF4O15260 269 aa2.53□□□□□ -2
NEDD4-211ENST00000514893 OR10H2O60403 315 aa2.53□□□□□ -2
NEDD4-211ENST00000514893 PRDM1O75626 825 aa2.53□□□□□ -2
NEDD4-211ENST00000514893 DNA2P51530 1060 aa2.53□□□□□ -2
NEDD4-211ENST00000514893 ARSEP51690 589 aa2.53□□□□□ -2
NEDD4-211ENST00000514893 SIRPAP78324 504 aa2.53□□□□□ -2
NEDD4-211ENST00000514893 KLC1Q07866 573 aa2.53□□□□□ -2
NEDD4-211ENST00000514893 CRYMQ14894 314 aa2.53□□□□□ -2
NEDD4-211ENST00000514893 MARC1Q5VT66 337 aa2.53□□□□□ -2
NEDD4-211ENST00000514893 KIAA0930Q6ICG6 404 aaPredicted RBP2.53□□□□□ -2
NEDD4-211ENST00000514893 FCRLAQ7L513 359 aa2.53□□□□□ -2
NEDD4-211ENST00000514893 SERINC5Q86VE9 423 aa2.53□□□□□ -2
NEDD4-211ENST00000514893 SSMEM1Q8WWF3 244 aa2.53□□□□□ -2
NEDD4-211ENST00000514893 LRRC59Q96AG4 307 aaKnown RBP2.53□□□□□ -2
NEDD4-211ENST00000514893 DIAPH3Q9NSV4 1193 aa2.53□□□□□ -2
NEDD4-211ENST00000514893 IL17BQ9UHF5 180 aa2.53□□□□□ -2
NEDD4-211ENST00000514893 FRMD3A2A2Y4 597 aa2.52□□□□□ -2.01
NEDD4-211ENST00000514893 ANKUB1A6NFN9 424 aa2.52□□□□□ -2.01
NEDD4-211ENST00000514893 CREG1O75629 220 aa2.52□□□□□ -2.01
NEDD4-211ENST00000514893 BCL10O95999 233 aa2.52□□□□□ -2.01
NEDD4-211ENST00000514893 RENP00797 406 aa2.52□□□□□ -2.01
NEDD4-211ENST00000514893 SUPT20HL2P0C7V6 817 aa2.52□□□□□ -2.01
NEDD4-211ENST00000514893 LMO2P25791 158 aa2.52□□□□□ -2.01
NEDD4-211ENST00000514893 PPARGP37231 505 aaPredicted RBP2.52□□□□□ -2.01
NEDD4-211ENST00000514893 NDUFV3P56181 108 aaKnown RBP2.52□□□□□ -2.01
NEDD4-211ENST00000514893 CA9Q16790 459 aa2.52□□□□□ -2.01
NEDD4-211ENST00000514893 C9orf66Q5T8R8 295 aa2.52□□□□□ -2.01
NEDD4-211ENST00000514893 CHURC1Q8WUH1 139 aa2.52□□□□□ -2.01
NEDD4-211ENST00000514893 FAM20AQ96MK3 541 aa2.52□□□□□ -2.01
NEDD4-211ENST00000514893 HNRNPABQ99729 332 aaKnown RBP2.52□□□□□ -2.01
NEDD4-211ENST00000514893 OCR1Q9BZK8 76 aa2.52□□□□□ -2.01
NEDD4-211ENST00000514893 PNNQ9H307 717 aaKnown RBP2.52□□□□□ -2.01
NEDD4-211ENST00000514893 NLGN3Q9NZ94 848 aa2.52□□□□□ -2.01
NEDD4-211ENST00000514893 IL17CQ9P0M4 197 aa2.52□□□□□ -2.01
NEDD4-211ENST00000514893 FPGTO14772 594 aa2.51□□□□□ -2.01
NEDD4-211ENST00000514893 RNASEH2AO75792 299 aaKnown RBP2.51□□□□□ -2.01
NEDD4-211ENST00000514893 MMP9P14780 707 aa2.51□□□□□ -2.01
NEDD4-211ENST00000514893 RGRP47804 291 aa2.51□□□□□ -2.01
NEDD4-211ENST00000514893 PPM1FP49593 454 aaPredicted RBP2.51□□□□□ -2.01
NEDD4-211ENST00000514893 SUOXP51687 545 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms