RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 C6orf136Q5SQH8 315 aa15.47■□□□□ 0.07
NUP54-214ENST00000514307 CWF19L1Q69YN2 538 aaKnown RBP15.47■□□□□ 0.07
NUP54-214ENST00000514307 SCIMPQ6UWF3 145 aa15.47■□□□□ 0.07
NUP54-214ENST00000514307 Q6ZSR9 355 aa15.47■□□□□ 0.07
NUP54-214ENST00000514307 GKN2Q86XP6 184 aa15.47■□□□□ 0.07
NUP54-214ENST00000514307 NRROSQ86YC3 692 aa15.47■□□□□ 0.07
NUP54-214ENST00000514307 C1orf210Q8IVY1 113 aa15.47■□□□□ 0.07
NUP54-214ENST00000514307 MIER2Q8N344 545 aa15.47■□□□□ 0.07
NUP54-214ENST00000514307 TBC1D19Q8N5T2 526 aa15.47■□□□□ 0.07
NUP54-214ENST00000514307 DCBLD1Q8N8Z6 715 aa15.47■□□□□ 0.07
NUP54-214ENST00000514307 LCN9Q8WX39 176 aa15.47■□□□□ 0.07
NUP54-214ENST00000514307 NEIL2Q969S2 332 aa15.47■□□□□ 0.07
NUP54-214ENST00000514307 MTFMTQ96DP5 389 aaKnown RBP15.47■□□□□ 0.07
NUP54-214ENST00000514307 METTL2AQ96IZ6 378 aaKnown RBP15.47■□□□□ 0.07
NUP54-214ENST00000514307 PELI2Q9HAT8 420 aa15.47■□□□□ 0.07
NUP54-214ENST00000514307 OR6C2Q9NZP2 312 aa15.47■□□□□ 0.07
NUP54-214ENST00000514307 TAAR2Q9P1P5 351 aa15.47■□□□□ 0.07
NUP54-214ENST00000514307 KCNE1BA0A087WTH5 132 aa15.46■□□□□ 0.07
NUP54-214ENST00000514307 OR52A4PA6NMU1 304 aa15.46■□□□□ 0.07
NUP54-214ENST00000514307 B2RBV5 119 aa15.46■□□□□ 0.07
NUP54-214ENST00000514307 E7EQ34 232 aa15.46■□□□□ 0.07
NUP54-214ENST00000514307 SCAMP1O15126 338 aa15.46■□□□□ 0.07
NUP54-214ENST00000514307 SEC22BO75396 215 aa15.46■□□□□ 0.07
NUP54-214ENST00000514307 PRR35P0CG20 571 aa15.46■□□□□ 0.07
NUP54-214ENST00000514307 COX4I1P13073 169 aa15.46■□□□□ 0.07
NUP54-214ENST00000514307 MAOBP27338 520 aa15.46■□□□□ 0.07
NUP54-214ENST00000514307 MAPK1P28482 360 aa15.46■□□□□ 0.07
NUP54-214ENST00000514307 SERPINB1P30740 379 aa15.46■□□□□ 0.07
NUP54-214ENST00000514307 CCR8P51685 355 aa15.46■□□□□ 0.07
NUP54-214ENST00000514307 HNRNPKP61978 463 aaKnown RBP eCLIP15.46■□□□□ 0.07
NUP54-214ENST00000514307 CSTF1Q05048 431 aaKnown RBP15.46■□□□□ 0.07
NUP54-214ENST00000514307 CSTF3Q12996 717 aaKnown RBP15.46■□□□□ 0.07
NUP54-214ENST00000514307 FASTKQ14296 549 aaKnown RBP15.46■□□□□ 0.07
NUP54-214ENST00000514307 NAA25Q14CX7 972 aa15.46■□□□□ 0.07
NUP54-214ENST00000514307 NR6A1Q15406 480 aa15.46■□□□□ 0.07
NUP54-214ENST00000514307 KIF19Q2TAC6 998 aa15.46■□□□□ 0.07
NUP54-214ENST00000514307 CACHD1Q5VU97 1274 aa15.46■□□□□ 0.07
NUP54-214ENST00000514307 SUSD1Q6UWL2 747 aa15.46■□□□□ 0.07
NUP54-214ENST00000514307 SLC9B2Q86UD5 537 aa15.46■□□□□ 0.07
NUP54-214ENST00000514307 AMIGO1Q86WK6 493 aa15.46■□□□□ 0.07
NUP54-214ENST00000514307 FNDC5Q8NAU1 212 aa15.46■□□□□ 0.07
NUP54-214ENST00000514307 FAM46DQ8NEK8 389 aa15.46■□□□□ 0.07
NUP54-214ENST00000514307 OR52E1Q8NGJ3 308 aa15.46■□□□□ 0.07
NUP54-214ENST00000514307 CCL4L1Q8NHW4 92 aa15.46■□□□□ 0.07
NUP54-214ENST00000514307 IL17FQ96PD4 163 aa15.46■□□□□ 0.07
NUP54-214ENST00000514307 AIF1LQ9BQI0 150 aa15.46■□□□□ 0.07
NUP54-214ENST00000514307 BTBD10Q9BSF8 475 aa15.46■□□□□ 0.07
NUP54-214ENST00000514307 SRMSQ9H3Y6 488 aa15.46■□□□□ 0.07
NUP54-214ENST00000514307 NT5DC2Q9H857 520 aa15.46■□□□□ 0.07
NUP54-214ENST00000514307 BRF2Q9HAW0 419 aa15.46■□□□□ 0.07
NUP54-214ENST00000514307 LRTM1Q9HBL6 345 aa15.46■□□□□ 0.07
NUP54-214ENST00000514307 PRMT8Q9NR22 394 aaPredicted RBP15.46■□□□□ 0.07
NUP54-214ENST00000514307 C1orf109Q9NX04 203 aa15.46■□□□□ 0.07
NUP54-214ENST00000514307 SCHIP1Q9P0W5 487 aaPredicted RBP15.46■□□□□ 0.07
NUP54-214ENST00000514307 ZNF624Q9P2J8 865 aaPredicted RBP15.46■□□□□ 0.07
NUP54-214ENST00000514307 APOBEC3BQ9UH17 382 aaKnown RBP15.46■□□□□ 0.07
NUP54-214ENST00000514307 FBXO4Q9UKT5 387 aa15.46■□□□□ 0.07
NUP54-214ENST00000514307 PLAGL1Q9UM63 463 aa15.46■□□□□ 0.07
NUP54-214ENST00000514307 DOLKQ9UPQ8 538 aa15.46■□□□□ 0.07
NUP54-214ENST00000514307 TSC22D4Q9Y3Q8 395 aa15.46■□□□□ 0.07
NUP54-214ENST00000514307 COPG1Q9Y678 874 aaKnown RBP15.46■□□□□ 0.07
NUP54-214ENST00000514307 LOC100653049A0A140TA62 436 aa15.45■□□□□ 0.06
NUP54-214ENST00000514307 KRT87PA6NCN2 255 aa15.45■□□□□ 0.06
NUP54-214ENST00000514307 A6NCN8 305 aa15.45■□□□□ 0.06
NUP54-214ENST00000514307 FOXE1O00358 373 aaPredicted RBP15.45■□□□□ 0.06
NUP54-214ENST00000514307 GYG2O15488 501 aa15.45■□□□□ 0.06
NUP54-214ENST00000514307 DNAJC8O75937 253 aaPredicted RBP15.45■□□□□ 0.06
NUP54-214ENST00000514307 KRT34O76011 436 aa15.45■□□□□ 0.06
NUP54-214ENST00000514307 MYO1DO94832 1006 aa15.45■□□□□ 0.06
NUP54-214ENST00000514307 CBX6O95503 412 aa15.45■□□□□ 0.06
NUP54-214ENST00000514307 PDGFBP01127 241 aaPredicted RBP15.45■□□□□ 0.06
NUP54-214ENST00000514307 PDYNP01213 254 aa15.45■□□□□ 0.06
NUP54-214ENST00000514307 NME1P15531 152 aaKnown RBP15.45■□□□□ 0.06
NUP54-214ENST00000514307 PIK3R1P27986 724 aa15.45■□□□□ 0.06
NUP54-214ENST00000514307 PKLRP30613 574 aa15.45■□□□□ 0.06
NUP54-214ENST00000514307 CNR2P34972 360 aa15.45■□□□□ 0.06
NUP54-214ENST00000514307 SLC19A1P41440 591 aa15.45■□□□□ 0.06
NUP54-214ENST00000514307 MRPL19P49406 292 aaKnown RBP15.45■□□□□ 0.06
NUP54-214ENST00000514307 NXPH1P58417 271 aa15.45■□□□□ 0.06
NUP54-214ENST00000514307 MXRA7P84157 204 aa15.45■□□□□ 0.06
NUP54-214ENST00000514307 PRDX1Q06830 199 aaKnown RBP15.45■□□□□ 0.06
NUP54-214ENST00000514307 ZNF542PQ5EBM4 170 aa15.45■□□□□ 0.06
NUP54-214ENST00000514307 PRRT3Q5FWE3 981 aa15.45■□□□□ 0.06
NUP54-214ENST00000514307 TMEM198Q66K66 360 aa15.45■□□□□ 0.06
NUP54-214ENST00000514307 TREML1Q86YW5 311 aa15.45■□□□□ 0.06
NUP54-214ENST00000514307 C2orf73Q8N5S3 287 aaPredicted RBP15.45■□□□□ 0.06
NUP54-214ENST00000514307 C1orf216Q8TAB5 229 aa15.45■□□□□ 0.06
NUP54-214ENST00000514307 TSPEARQ8WU66 669 aa15.45■□□□□ 0.06
NUP54-214ENST00000514307 CMTM7Q96FZ5 175 aa15.45■□□□□ 0.06
NUP54-214ENST00000514307 RAB3IPQ96QF0 476 aaPredicted RBP15.45■□□□□ 0.06
NUP54-214ENST00000514307 C1orf21Q9H246 121 aa15.45■□□□□ 0.06
NUP54-214ENST00000514307 ZNF385DQ9H6B1 395 aa15.45■□□□□ 0.06
NUP54-214ENST00000514307 ERVMER34-1Q9H9K5 563 aa15.45■□□□□ 0.06
NUP54-214ENST00000514307 EFCAB1Q9HAE3 211 aa15.45■□□□□ 0.06
NUP54-214ENST00000514307 NOP53Q9NZM5 478 aaKnown RBP15.45■□□□□ 0.06
NUP54-214ENST00000514307 SUSD2Q9UGT4 822 aa15.45■□□□□ 0.06
NUP54-214ENST00000514307 SNX7Q9UNH6 387 aa15.45■□□□□ 0.06
NUP54-214ENST00000514307 TMED5Q9Y3A6 229 aa15.45■□□□□ 0.06
NUP54-214ENST00000514307 TRBV23OR9-2A0A075B6M9 112 aa15.44■□□□□ 0.06
NUP54-214ENST00000514307 NPIPB8E9PQR5 432 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms