RNA–Protein interactions for RNA: ENST00000513331.1

GFM2-208, Transcript of G elongation factor mitochondrial 2, human

TSL 2

Gene GFM2, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GFM2-208	ENST00000513331	PLOD3	O60568	738 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	PFKFB2	O60825	505 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	ZNF254	O75437	659 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	CAMTA2	O94983	1202 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	YEATS4	O95619	227 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	PAH	P00439	452 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	SERPINB2	P05120	415 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	TSPY3	P0CV98	308 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	TSPY8	P0CW00	308 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	CPA3	P15088	417 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	AMD1	P17707	334 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	POLR2E	P19388	210 aa	Known RBP	4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	ATP6V1C1	P21283	382 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	CORO1A	P31146	461 aa	Known RBP	4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	PRKAR2B	P31323	418 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	EPHX2	P34913	555 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	KRT20	P35900	424 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	MTHFR	P42898	656 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	RAD52	P43351	418 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	TAS2R40	P59535	323 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	ARF3	P61204	181 aa	Predicted RBP	4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	ARF1	P84077	181 aa	Known RBP	4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	TSPY1	Q01534	308 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	PLOD1	Q02809	727 aa	Predicted RBP	4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	ILF3	Q12906	894 aa	Known RBP eCLIP	4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	CAVIN4	Q5BKX8	364 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	KLC3	Q6P597	504 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	KLHL35	Q6PF15	583 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	GFRAL	Q6UXV0	394 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	IKBIP	Q70UQ0	350 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	NLRP9	Q7RTR0	991 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	GALNT5	Q7Z7M9	940 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	TBC1D1	Q86TI0	1168 aa	Predicted RBP	4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	NR2C2AP	Q86WQ0	139 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	TMEM219	Q86XT9	240 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	ITPRIP	Q8IWB1	547 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	RNF10	Q8N5U6	811 aa	Known RBP	4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	ARFGAP2	Q8N6H7	521 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	LINC00469	Q8N7U9	141 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	CCDC63	Q8NA47	563 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	SPERT	Q8NA61	448 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	CNBD1	Q8NA66	436 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	ANKRD52	Q8NB46	1076 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	SPATA20	Q8TB22	786 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	CCDC110	Q8TBZ0	833 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	CCDC12	Q8WUD4	166 aa	Predicted RBP	4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	SLC20A1	Q8WUM9	679 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	ZNF606	Q8WXB4	792 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	CD101	Q93033	1021 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	PIGT	Q969N2	578 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	AZIN2	Q96A70	460 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	RHBDF1	Q96CC6	855 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	RBM14	Q96PK6	669 aa	Known RBP	4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	TSGA13	Q96PP4	275 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	CCT8L2	Q96SF2	557 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	PKP4	Q99569	1192 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	CCT7	Q99832	543 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	TIPIN	Q9BVW5	301 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	ITPA	Q9BY32	194 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	CARD9	Q9H257	536 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	PARVG	Q9HBI0	331 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	PARVB	Q9HBI1	364 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	LAMP5	Q9UJQ1	280 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	FBXL2	Q9UKC9	423 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	DUSP12	Q9UNI6	340 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	AGTPBP1	Q9UPW5	1226 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	SATB2	Q9UPW6	733 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	TIMM22	Q9Y584	194 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	CLIC4	Q9Y696	253 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	COMMD3-BMI1	R4GMX3	469 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	CCDC88A	Q3V6T2	1871 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	MYH7	P12883	1935 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	MEGF6	O75095	1541 aa		4.36	□□□□□ -1.71
GFM2-208	ENST00000513331	QRICH2	Q9H0J4	1663 aa		4.35	□□□□□ -1.71
GFM2-208	ENST00000513331	ITSN1	Q15811	1721 aa		4.35	□□□□□ -1.71
GFM2-208	ENST00000513331	TOGARAM1	Q9Y4F4	1720 aa		4.35	□□□□□ -1.71
GFM2-208	ENST00000513331	ARFGEF1	Q9Y6D6	1849 aa		4.35	□□□□□ -1.71
GFM2-208	ENST00000513331	BRCA1	P38398	1863 aa	Known RBP	4.35	□□□□□ -1.71
GFM2-208	ENST00000513331	MYH13	Q9UKX3	1938 aa		4.35	□□□□□ -1.71
GFM2-208	ENST00000513331	SYNDIG1L	A6NDD5	238 aa		4.35	□□□□□ -1.71
GFM2-208	ENST00000513331	MYO1G	B0I1T2	1018 aa		4.35	□□□□□ -1.71
GFM2-208	ENST00000513331	ATP2A1	O14983	1001 aa		4.35	□□□□□ -1.71
GFM2-208	ENST00000513331	KCNN4	O15554	427 aa		4.35	□□□□□ -1.71
GFM2-208	ENST00000513331	PPIP5K2	O43314	1243 aa		4.35	□□□□□ -1.71
GFM2-208	ENST00000513331	STX10	O60499	249 aa		4.35	□□□□□ -1.71
GFM2-208	ENST00000513331	RHOXF2B	P0C7M4	288 aa		4.35	□□□□□ -1.71
GFM2-208	ENST00000513331	CDH1	P12830	882 aa		4.35	□□□□□ -1.71
GFM2-208	ENST00000513331	ATP6V1B1	P15313	513 aa		4.35	□□□□□ -1.71
GFM2-208	ENST00000513331	ACADS	P16219	412 aa		4.35	□□□□□ -1.71
GFM2-208	ENST00000513331	POR	P16435	677 aa	Predicted RBP	4.35	□□□□□ -1.71
GFM2-208	ENST00000513331	SP100	P23497	879 aa	Predicted RBP	4.35	□□□□□ -1.71
GFM2-208	ENST00000513331	ATP5D	P30049	168 aa		4.35	□□□□□ -1.71
GFM2-208	ENST00000513331	APOBEC1	P41238	236 aa	Known RBP	4.35	□□□□□ -1.71
GFM2-208	ENST00000513331	EPS15	P42566	896 aa		4.35	□□□□□ -1.71
GFM2-208	ENST00000513331	GALC	P54803	685 aa		4.35	□□□□□ -1.71
GFM2-208	ENST00000513331	EEF1A1	P68104	462 aa	Known RBP	4.35	□□□□□ -1.71
GFM2-208	ENST00000513331	RRS1	Q15050	365 aa	Known RBP	4.35	□□□□□ -1.71
GFM2-208	ENST00000513331	PPP1R7	Q15435	360 aa		4.35	□□□□□ -1.71
GFM2-208	ENST00000513331	ZNF805	Q5CZA5	627 aa		4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms