RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 TLK1Q9UKI8 766 aa12.74□□□□□ -0.37
RNF4-215ENST00000511843 TP53TG5Q9Y2B4 290 aa12.74□□□□□ -0.37
RNF4-215ENST00000511843 HEMK1Q9Y5R4 338 aaPredicted RBP12.74□□□□□ -0.37
RNF4-215ENST00000511843 PSAT1Q9Y617 370 aa12.74□□□□□ -0.37
RNF4-215ENST00000511843 COMMD10Q9Y6G5 202 aa12.74□□□□□ -0.37
RNF4-215ENST00000511843 SCN3AQ9NY46 2000 aa12.74□□□□□ -0.37
RNF4-215ENST00000511843 IGKV1-8A0A0C4DH67 115 aa12.73□□□□□ -0.37
RNF4-215ENST00000511843 GFYI3L273 518 aa12.73□□□□□ -0.37
RNF4-215ENST00000511843 MED26O95402 600 aa12.73□□□□□ -0.37
RNF4-215ENST00000511843 ZIC2O95409 532 aaPredicted RBP12.73□□□□□ -0.37
RNF4-215ENST00000511843 EIF2S1P05198 315 aaKnown RBP12.73□□□□□ -0.37
RNF4-215ENST00000511843 SFTPCP11686 197 aa12.73□□□□□ -0.37
RNF4-215ENST00000511843 ENO3P13929 434 aaPredicted RBP12.73□□□□□ -0.37
RNF4-215ENST00000511843 IMPA1P29218 277 aa12.73□□□□□ -0.37
RNF4-215ENST00000511843 OTX2P32243 289 aa12.73□□□□□ -0.37
RNF4-215ENST00000511843 GCGRP47871 477 aa12.73□□□□□ -0.37
RNF4-215ENST00000511843 PMS2P54278 862 aa12.73□□□□□ -0.37
RNF4-215ENST00000511843 DCDP81605 110 aaKnown RBP12.73□□□□□ -0.37
RNF4-215ENST00000511843 NKAIN1Q4KMZ8 207 aa12.73□□□□□ -0.37
RNF4-215ENST00000511843 ZC3H12BQ5HYM0 836 aaKnown RBP12.73□□□□□ -0.37
RNF4-215ENST00000511843 TLDC1Q6P9B6 456 aa12.73□□□□□ -0.37
RNF4-215ENST00000511843 LINGO1Q96FE5 620 aa12.73□□□□□ -0.37
RNF4-215ENST00000511843 OLFM1Q99784 485 aa12.73□□□□□ -0.37
RNF4-215ENST00000511843 MRPS30Q9NP92 439 aaKnown RBP12.73□□□□□ -0.37
RNF4-215ENST00000511843 SLC22A11Q9NSA0 550 aa12.73□□□□□ -0.37
RNF4-215ENST00000511843 TAS2R13Q9NYV9 303 aa12.73□□□□□ -0.37
RNF4-215ENST00000511843 IFT80Q9P2H3 777 aaPredicted RBP12.73□□□□□ -0.37
RNF4-215ENST00000511843 KLHL42Q9P2K6 505 aa12.73□□□□□ -0.37
RNF4-215ENST00000511843 SRPK3Q9UPE1 567 aa12.73□□□□□ -0.37
RNF4-215ENST00000511843 TENM4Q6N022 2769 aa12.73□□□□□ -0.37
RNF4-215ENST00000511843 OR2A25A4D2G3 310 aa12.72□□□□□ -0.37
RNF4-215ENST00000511843 TARM1B6A8C7 271 aa12.72□□□□□ -0.37
RNF4-215ENST00000511843 E7ENX8 843 aa12.72□□□□□ -0.37
RNF4-215ENST00000511843 MASP2O00187 686 aa12.72□□□□□ -0.37
RNF4-215ENST00000511843 SMAPO00193 183 aa12.72□□□□□ -0.37
RNF4-215ENST00000511843 RFPL1O75677 317 aa12.72□□□□□ -0.37
RNF4-215ENST00000511843 KLF7O75840 302 aaPredicted RBP12.72□□□□□ -0.37
RNF4-215ENST00000511843 STATHP02808 62 aa12.72□□□□□ -0.37
RNF4-215ENST00000511843 PDGFAP04085 211 aa12.72□□□□□ -0.37
RNF4-215ENST00000511843 SAT1P21673 171 aa12.72□□□□□ -0.37
RNF4-215ENST00000511843 CMPK1P30085 196 aa12.72□□□□□ -0.37
RNF4-215ENST00000511843 TAP2Q03519 686 aa12.72□□□□□ -0.37
RNF4-215ENST00000511843 ATP1A4Q13733 1029 aa12.72□□□□□ -0.37
RNF4-215ENST00000511843 PHKG1Q16816 387 aa12.72□□□□□ -0.37
RNF4-215ENST00000511843 WASHC2DQ5SRD0 308 aa12.72□□□□□ -0.37
RNF4-215ENST00000511843 HECTD2Q5U5R9 776 aa12.72□□□□□ -0.37
RNF4-215ENST00000511843 ICE2Q659A1 982 aa12.72□□□□□ -0.37
RNF4-215ENST00000511843 KIAA0408Q6ZU52 694 aa12.72□□□□□ -0.37
RNF4-215ENST00000511843 RNF44Q7L0R7 432 aa12.72□□□□□ -0.37
RNF4-215ENST00000511843 LRRC56Q8IYG6 542 aaPredicted RBP12.72□□□□□ -0.37
RNF4-215ENST00000511843 ZBED8Q8IZ13 594 aa12.72□□□□□ -0.37
RNF4-215ENST00000511843 PROKR1Q8TCW9 393 aa12.72□□□□□ -0.37
RNF4-215ENST00000511843 ZUFSPQ96AP4 578 aa12.72□□□□□ -0.37
RNF4-215ENST00000511843 LRRC39Q96DD0 335 aa12.72□□□□□ -0.37
RNF4-215ENST00000511843 DPH2Q9BQC3 489 aaPredicted RBP12.72□□□□□ -0.37
RNF4-215ENST00000511843 CUTCQ9NTM9 273 aa12.72□□□□□ -0.37
RNF4-215ENST00000511843 CUEDC1Q9NWM3 386 aaPredicted RBP12.72□□□□□ -0.37
RNF4-215ENST00000511843 GRHL1Q9NZI5 618 aa12.72□□□□□ -0.37
RNF4-215ENST00000511843 GPN3Q9UHW5 284 aaPredicted RBP12.72□□□□□ -0.37
RNF4-215ENST00000511843 TUBD1Q9UJT1 453 aa12.72□□□□□ -0.37
RNF4-215ENST00000511843 IKZF3Q9UKT9 509 aa12.72□□□□□ -0.37
RNF4-215ENST00000511843 SH2B3Q9UQQ2 575 aa12.72□□□□□ -0.37
RNF4-215ENST00000511843 PDE10AQ9Y233 779 aa12.72□□□□□ -0.37
RNF4-215ENST00000511843 PTRH2Q9Y3E5 179 aaKnown RBP12.72□□□□□ -0.37
RNF4-215ENST00000511843 MAU2Q9Y6X3 613 aa12.72□□□□□ -0.37
RNF4-215ENST00000511843 SCN2AQ99250 2005 aa12.72□□□□□ -0.37
RNF4-215ENST00000511843 A0A1B0GX78 115 aa12.71□□□□□ -0.37
RNF4-215ENST00000511843 FAM187AA6NFU0 413 aa12.71□□□□□ -0.37
RNF4-215ENST00000511843 E7ESA3 106 aa12.71□□□□□ -0.37
RNF4-215ENST00000511843 MKRN2OSH3BPM6 223 aa12.71□□□□□ -0.37
RNF4-215ENST00000511843 DSCR3O14972 297 aa12.71□□□□□ -0.37
RNF4-215ENST00000511843 ZBTB14O43829 449 aa12.71□□□□□ -0.37
RNF4-215ENST00000511843 TSPAN12O95859 305 aa12.71□□□□□ -0.37
RNF4-215ENST00000511843 RECKO95980 971 aa12.71□□□□□ -0.37
RNF4-215ENST00000511843 SKIV2L2P42285 1042 aaKnown RBP12.71□□□□□ -0.37
RNF4-215ENST00000511843 OR1D4P47884 311 aa12.71□□□□□ -0.37
RNF4-215ENST00000511843 CCL11P51671 97 aa12.71□□□□□ -0.37
RNF4-215ENST00000511843 MGAT5Q09328 741 aa12.71□□□□□ -0.37
RNF4-215ENST00000511843 ZNF460Q14592 562 aa12.71□□□□□ -0.37
RNF4-215ENST00000511843 GRM7Q14831 915 aa12.71□□□□□ -0.37
RNF4-215ENST00000511843 ARHGAP19Q14CB8 494 aa12.71□□□□□ -0.37
RNF4-215ENST00000511843 TRADDQ15628 312 aa12.71□□□□□ -0.37
RNF4-215ENST00000511843 LACTB2Q53H82 288 aaPredicted RBP12.71□□□□□ -0.37
RNF4-215ENST00000511843 THEMIS2Q5TEJ8 643 aa12.71□□□□□ -0.37
RNF4-215ENST00000511843 UGT3A1Q6NUS8 523 aa12.71□□□□□ -0.37
RNF4-215ENST00000511843 FBXO42Q6P3S6 717 aa12.71□□□□□ -0.37
RNF4-215ENST00000511843 SHISA6Q6ZSJ9 500 aa12.71□□□□□ -0.37
RNF4-215ENST00000511843 COX15Q7KZN9 410 aa12.71□□□□□ -0.37
RNF4-215ENST00000511843 ADCK2Q7Z695 626 aa12.71□□□□□ -0.37
RNF4-215ENST00000511843 PAQR7Q86WK9 346 aa12.71□□□□□ -0.37
RNF4-215ENST00000511843 PLD3Q8IV08 490 aa12.71□□□□□ -0.37
RNF4-215ENST00000511843 MYO1HQ8N1T3 1032 aa12.71□□□□□ -0.37
RNF4-215ENST00000511843 FBXO15Q8NCQ5 510 aaPredicted RBP12.71□□□□□ -0.37
RNF4-215ENST00000511843 GABPB2Q8TAK5 448 aaPredicted RBP12.71□□□□□ -0.37
RNF4-215ENST00000511843 THAP4Q8WY91 577 aa12.71□□□□□ -0.37
RNF4-215ENST00000511843 ALKBH8Q96BT7 664 aaKnown RBP12.71□□□□□ -0.37
RNF4-215ENST00000511843 C16orf45Q96MC5 204 aaPredicted RBP12.71□□□□□ -0.37
RNF4-215ENST00000511843 ZNF285Q96NJ3 590 aa12.71□□□□□ -0.37
RNF4-215ENST00000511843 ZFYVE21Q9BQ24 234 aa12.71□□□□□ -0.37
RNF4-215ENST00000511843 PLCD4Q9BRC7 762 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms