RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 GAGE12IP0CL82 117 aa6.23□□□□□ -1.41
USP53-206ENST00000510737 GNA11P29992 359 aa6.23□□□□□ -1.41
USP53-206ENST00000510737 HSPA4P34932 840 aa6.23□□□□□ -1.41
USP53-206ENST00000510737 ACADVLP49748 655 aa6.23□□□□□ -1.41
USP53-206ENST00000510737 PHEXP78562 749 aa6.23□□□□□ -1.41
USP53-206ENST00000510737 IL9RQ01113 521 aa6.23□□□□□ -1.41
USP53-206ENST00000510737 GAGE1Q13065 139 aa6.23□□□□□ -1.41
USP53-206ENST00000510737 GAGE4Q13068 117 aa6.23□□□□□ -1.41
USP53-206ENST00000510737 VEPH1Q14D04 833 aa6.23□□□□□ -1.41
USP53-206ENST00000510737 TAF12Q16514 161 aa6.23□□□□□ -1.41
USP53-206ENST00000510737 CADM4Q8NFZ8 388 aa6.23□□□□□ -1.41
USP53-206ENST00000510737 OR10T2Q8NGX3 314 aa6.23□□□□□ -1.41
USP53-206ENST00000510737 KCNE4Q8WWG9 221 aa6.23□□□□□ -1.41
USP53-206ENST00000510737 MRPS31Q92665 395 aaKnown RBP6.23□□□□□ -1.41
USP53-206ENST00000510737 ACOX2Q99424 681 aa6.23□□□□□ -1.41
USP53-206ENST00000510737 GPR174Q9BXC1 333 aa6.23□□□□□ -1.41
USP53-206ENST00000510737 RBM28Q9NW13 759 aaKnown RBP6.23□□□□□ -1.41
USP53-206ENST00000510737 GCNT4Q9P109 453 aa6.23□□□□□ -1.41
USP53-206ENST00000510737 PAM16Q9Y3D7 125 aa6.23□□□□□ -1.41
USP53-206ENST00000510737 AHCTF1Q8WYP5 2266 aa6.23□□□□□ -1.41
USP53-206ENST00000510737 HMX3A6NHT5 357 aa6.22□□□□□ -1.41
USP53-206ENST00000510737 MEI4A8MW99 385 aa6.22□□□□□ -1.41
USP53-206ENST00000510737 SLC37A4O43826 429 aa6.22□□□□□ -1.41
USP53-206ENST00000510737 HAPLN1P10915 354 aaPredicted RBP6.22□□□□□ -1.41
USP53-206ENST00000510737 FGF5P12034 268 aa6.22□□□□□ -1.41
USP53-206ENST00000510737 AARSP49588 968 aaKnown RBP eCLIP6.22□□□□□ -1.41
USP53-206ENST00000510737 TAF6P49848 677 aa6.22□□□□□ -1.41
USP53-206ENST00000510737 KDSRQ06136 332 aa6.22□□□□□ -1.41
USP53-206ENST00000510737 EFNB3Q15768 340 aa6.22□□□□□ -1.41
USP53-206ENST00000510737 DCAF4L1Q3SXM0 396 aa6.22□□□□□ -1.41
USP53-206ENST00000510737 SLC39A12Q504Y0 691 aa6.22□□□□□ -1.41
USP53-206ENST00000510737 PAPPA-AS1Q5QFB9 102 aa6.22□□□□□ -1.41
USP53-206ENST00000510737 ATF7IP2Q5U623 682 aa6.22□□□□□ -1.41
USP53-206ENST00000510737 SDHAF4Q5VUM1 108 aa6.22□□□□□ -1.41
USP53-206ENST00000510737 RFFLQ8WZ73 363 aa6.22□□□□□ -1.41
USP53-206ENST00000510737 CNDP2Q96KP4 475 aaKnown RBP6.22□□□□□ -1.41
USP53-206ENST00000510737 C3orf30Q96M34 536 aa6.22□□□□□ -1.41
USP53-206ENST00000510737 ITM2CQ9NQX7 267 aa6.22□□□□□ -1.41
USP53-206ENST00000510737 TUBGCP4Q9UGJ1 667 aa6.22□□□□□ -1.41
USP53-206ENST00000510737 KCNS2Q9ULS6 477 aa6.22□□□□□ -1.41
USP53-206ENST00000510737 NF1P21359 2839 aa6.21□□□□□ -1.41
USP53-206ENST00000510737 ARID2Q68CP9 1835 aa6.21□□□□□ -1.42
USP53-206ENST00000510737 TRAV19A0A0A6YYK7 116 aa6.21□□□□□ -1.42
USP53-206ENST00000510737 FAM172BPA6NC97 362 aa6.21□□□□□ -1.42
USP53-206ENST00000510737 WASH3PC4AMC7 463 aa6.21□□□□□ -1.42
USP53-206ENST00000510737 PAPSS1O43252 624 aaPredicted RBP6.21□□□□□ -1.42
USP53-206ENST00000510737 SLC22A3O75751 556 aa6.21□□□□□ -1.42
USP53-206ENST00000510737 ELAVL4P26378 380 aaKnown RBP6.21□□□□□ -1.42
USP53-206ENST00000510737 TIMP3P35625 211 aa6.21□□□□□ -1.42
USP53-206ENST00000510737 EIF2DP41214 584 aaKnown RBP6.21□□□□□ -1.42
USP53-206ENST00000510737 ARMCX5Q6P1M9 558 aa6.21□□□□□ -1.42
USP53-206ENST00000510737 KDM7AQ6ZMT4 941 aa6.21□□□□□ -1.42
USP53-206ENST00000510737 SHFQ7M4L6 423 aa6.21□□□□□ -1.42
USP53-206ENST00000510737 EPHX4Q8IUS5 362 aa6.21□□□□□ -1.42
USP53-206ENST00000510737 SFTPA2Q8IWL1 248 aa6.21□□□□□ -1.42
USP53-206ENST00000510737 ZBTB8OSQ8IWT0 167 aa6.21□□□□□ -1.42
USP53-206ENST00000510737 ZMIZ2Q8NF64 920 aa6.21□□□□□ -1.42
USP53-206ENST00000510737 CREB3L4Q8TEY5 395 aa6.21□□□□□ -1.42
USP53-206ENST00000510737 FIG4Q92562 907 aa6.21□□□□□ -1.42
USP53-206ENST00000510737 IGSF8Q969P0 613 aa6.21□□□□□ -1.42
USP53-206ENST00000510737 RNFT2Q96EX2 444 aa6.21□□□□□ -1.42
USP53-206ENST00000510737 SEMA3CQ99985 751 aa6.21□□□□□ -1.42
USP53-206ENST00000510737 HSD17B14Q9BPX1 270 aa6.21□□□□□ -1.42
USP53-206ENST00000510737 TMEM206Q9H813 350 aa6.21□□□□□ -1.42
USP53-206ENST00000510737 POLD4Q9HCU8 107 aa6.21□□□□□ -1.42
USP53-206ENST00000510737 TRPC7Q9HCX4 862 aa6.21□□□□□ -1.42
USP53-206ENST00000510737 KCNMB3Q9NPA1 279 aa6.21□□□□□ -1.42
USP53-206ENST00000510737 ASCL3Q9NQ33 180 aa6.21□□□□□ -1.42
USP53-206ENST00000510737 ANKEF1Q9NU02 776 aa6.21□□□□□ -1.42
USP53-206ENST00000510737 SPATS2LQ9NUQ6 558 aaKnown RBP6.21□□□□□ -1.42
USP53-206ENST00000510737 DDX25Q9UHL0 483 aaKnown RBP6.21□□□□□ -1.42
USP53-206ENST00000510737 SIX4Q9UIU6 781 aa6.21□□□□□ -1.42
USP53-206ENST00000510737 ARHGAP26Q9UNA1 814 aa6.21□□□□□ -1.42
USP53-206ENST00000510737 MMP24Q9Y5R2 645 aa6.21□□□□□ -1.42
USP53-206ENST00000510737 OTOGQ6ZRI0 2925 aa6.21□□□□□ -1.42
USP53-206ENST00000510737 SPENQ96T58 3664 aaKnown RBP6.21□□□□□ -1.42
USP53-206ENST00000510737 CRYBG3Q68DQ2 2970 aa6.2□□□□□ -1.42
USP53-206ENST00000510737 ERI2A8K979 691 aaKnown RBP6.2□□□□□ -1.42
USP53-206ENST00000510737 MID1O15344 667 aa6.2□□□□□ -1.42
USP53-206ENST00000510737 ZBTB43O43298 467 aa6.2□□□□□ -1.42
USP53-206ENST00000510737 LYPLA2O95372 231 aa6.2□□□□□ -1.42
USP53-206ENST00000510737 TYMPP19971 482 aa6.2□□□□□ -1.42
USP53-206ENST00000510737 VEGFCP49767 419 aa6.2□□□□□ -1.42
USP53-206ENST00000510737 ERVPABLB-1P60509 514 aa6.2□□□□□ -1.42
USP53-206ENST00000510737 SPAG1Q07617 926 aa6.2□□□□□ -1.42
USP53-206ENST00000510737 FCN2Q15485 313 aa6.2□□□□□ -1.42
USP53-206ENST00000510737 OASLQ15646 514 aaKnown RBP6.2□□□□□ -1.42
USP53-206ENST00000510737 ZBTB6Q15916 424 aa6.2□□□□□ -1.42
USP53-206ENST00000510737 TRMT11Q7Z4G4 463 aaKnown RBP6.2□□□□□ -1.42
USP53-206ENST00000510737 ZC3HC1Q86WB0 502 aaKnown RBP6.2□□□□□ -1.42
USP53-206ENST00000510737 EID2Q8N6I1 236 aa6.2□□□□□ -1.42
USP53-206ENST00000510737 CCDC12Q8WUD4 166 aaPredicted RBP6.2□□□□□ -1.42
USP53-206ENST00000510737 TANKQ92844 425 aa6.2□□□□□ -1.42
USP53-206ENST00000510737 FAM20AQ96MK3 541 aa6.2□□□□□ -1.42
USP53-206ENST00000510737 GABRG3Q99928 467 aa6.2□□□□□ -1.42
USP53-206ENST00000510737 CRB3Q9BUF7 120 aa6.2□□□□□ -1.42
USP53-206ENST00000510737 KIFC3Q9BVG8 833 aa6.2□□□□□ -1.42
USP53-206ENST00000510737 CCDC94Q9BW85 323 aaPredicted RBP6.2□□□□□ -1.42
USP53-206ENST00000510737 C2orf40Q9H1Z8 148 aa6.2□□□□□ -1.42
USP53-206ENST00000510737 GEMIN8Q9NWZ8 242 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms