RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 SEMA3GQ9NS98 782 aa14.71□□□□□ -0.05
TPM3-219ENST00000509409 CUEDC1Q9NWM3 386 aaPredicted RBP14.71□□□□□ -0.05
TPM3-219ENST00000509409 SAMD15Q9P1V8 674 aa14.71□□□□□ -0.05
TPM3-219ENST00000509409 STOX2Q9P2F5 926 aaPredicted RBP14.71□□□□□ -0.05
TPM3-219ENST00000509409 GALPQ9UBC7 116 aa14.71□□□□□ -0.05
TPM3-219ENST00000509409 PCSK5Q92824 1860 aa14.7□□□□□ -0.06
TPM3-219ENST00000509409 A0A1W2PPV9 198 aa14.7□□□□□ -0.06
TPM3-219ENST00000509409 CTAGE9A4FU28 777 aa14.7□□□□□ -0.06
TPM3-219ENST00000509409 MATN4O95460 622 aa14.7□□□□□ -0.06
TPM3-219ENST00000509409 DDAH2O95865 285 aa14.7□□□□□ -0.06
TPM3-219ENST00000509409 KRT14P02533 472 aa14.7□□□□□ -0.06
TPM3-219ENST00000509409 CATP04040 527 aaKnown RBP14.7□□□□□ -0.06
TPM3-219ENST00000509409 PKMP14618 531 aaKnown RBP14.7□□□□□ -0.06
TPM3-219ENST00000509409 CARSP49589 748 aaKnown RBP14.7□□□□□ -0.06
TPM3-219ENST00000509409 THOC5Q13769 683 aaKnown RBP14.7□□□□□ -0.06
TPM3-219ENST00000509409 NAA25Q14CX7 972 aa14.7□□□□□ -0.06
TPM3-219ENST00000509409 HIF1AQ16665 826 aa14.7□□□□□ -0.06
TPM3-219ENST00000509409 TYSND1Q2T9J0 566 aa14.7□□□□□ -0.06
TPM3-219ENST00000509409 KLHL38Q2WGJ6 581 aa14.7□□□□□ -0.06
TPM3-219ENST00000509409 ACSBG2Q5FVE4 666 aa14.7□□□□□ -0.06
TPM3-219ENST00000509409 KIAA0930Q6ICG6 404 aaPredicted RBP14.7□□□□□ -0.06
TPM3-219ENST00000509409 FBXO42Q6P3S6 717 aa14.7□□□□□ -0.06
TPM3-219ENST00000509409 SUSD1Q6UWL2 747 aa14.7□□□□□ -0.06
TPM3-219ENST00000509409 ZNF662Q6ZS27 426 aa14.7□□□□□ -0.06
TPM3-219ENST00000509409 Q6ZS92 163 aa14.7□□□□□ -0.06
TPM3-219ENST00000509409 DTWD1Q8N5C7 304 aa14.7□□□□□ -0.06
TPM3-219ENST00000509409 SMPDL3AQ92484 453 aa14.7□□□□□ -0.06
TPM3-219ENST00000509409 THOC3Q96J01 351 aaKnown RBP14.7□□□□□ -0.06
TPM3-219ENST00000509409 CABS1Q96KC9 395 aa14.7□□□□□ -0.06
TPM3-219ENST00000509409 ZFYVE21Q9BQ24 234 aa14.7□□□□□ -0.06
TPM3-219ENST00000509409 CRB3Q9BUF7 120 aa14.7□□□□□ -0.06
TPM3-219ENST00000509409 LHPPQ9H008 270 aa14.7□□□□□ -0.06
TPM3-219ENST00000509409 FAM114A2Q9NRY5 505 aa14.7□□□□□ -0.06
TPM3-219ENST00000509409 ABCF3Q9NUQ8 709 aa14.7□□□□□ -0.06
TPM3-219ENST00000509409 ZNF282Q9UDV7 671 aaPredicted RBP14.7□□□□□ -0.06
TPM3-219ENST00000509409 VPS9D1Q9Y2B5 631 aa14.7□□□□□ -0.06
TPM3-219ENST00000509409 KLK4Q9Y5K2 254 aa14.7□□□□□ -0.06
TPM3-219ENST00000509409 HS3ST3B1Q9Y662 390 aa14.7□□□□□ -0.06
TPM3-219ENST00000509409 A1L4Q6 167 aa14.69□□□□□ -0.06
TPM3-219ENST00000509409 MAGEB16A2A368 324 aa14.69□□□□□ -0.06
TPM3-219ENST00000509409 ANKUB1A6NFN9 424 aa14.69□□□□□ -0.06
TPM3-219ENST00000509409 VSTM2BA6NLU5 285 aa14.69□□□□□ -0.06
TPM3-219ENST00000509409 ZNF839A8K0R7 811 aa14.69□□□□□ -0.06
TPM3-219ENST00000509409 ARHGEF33A8MVX0 844 aa14.69□□□□□ -0.06
TPM3-219ENST00000509409 H0YGG7 62 aa14.69□□□□□ -0.06
TPM3-219ENST00000509409 NRP2O60462 931 aa14.69□□□□□ -0.06
TPM3-219ENST00000509409 VPS26AO75436 327 aa14.69□□□□□ -0.06
TPM3-219ENST00000509409 CBX6O95503 412 aa14.69□□□□□ -0.06
TPM3-219ENST00000509409 ZGLP1P0C6A0 271 aa14.69□□□□□ -0.06
TPM3-219ENST00000509409 OGNP20774 298 aaKnown RBP14.69□□□□□ -0.06
TPM3-219ENST00000509409 FBLP22087 321 aaKnown RBP14.69□□□□□ -0.06
TPM3-219ENST00000509409 ATP5DP30049 168 aa14.69□□□□□ -0.06
TPM3-219ENST00000509409 ADARP55265 1226 aaKnown RBP14.69□□□□□ -0.06
TPM3-219ENST00000509409 ARF3P61204 181 aaPredicted RBP14.69□□□□□ -0.06
TPM3-219ENST00000509409 YBX1P67809 324 aaKnown RBP14.69□□□□□ -0.06
TPM3-219ENST00000509409 DHX34Q14147 1143 aaKnown RBP14.69□□□□□ -0.06
TPM3-219ENST00000509409 MUM1Q2TAK8 710 aa14.69□□□□□ -0.06
TPM3-219ENST00000509409 PRMT9Q6P2P2 845 aa14.69□□□□□ -0.06
TPM3-219ENST00000509409 CUZD1Q86UP6 607 aa14.69□□□□□ -0.06
TPM3-219ENST00000509409 PRELID2Q8N945 189 aa14.69□□□□□ -0.06
TPM3-219ENST00000509409 STT3BQ8TCJ2 826 aa14.69□□□□□ -0.06
TPM3-219ENST00000509409 MAGOHBQ96A72 148 aaKnown RBP14.69□□□□□ -0.06
TPM3-219ENST00000509409 CNDP1Q96KN2 507 aa14.69□□□□□ -0.06
TPM3-219ENST00000509409 WDR77Q9BQA1 342 aaPredicted RBP14.69□□□□□ -0.06
TPM3-219ENST00000509409 CCDC68Q9H2F9 335 aa14.69□□□□□ -0.06
TPM3-219ENST00000509409 EPS8L2Q9H6S3 715 aa14.69□□□□□ -0.06
TPM3-219ENST00000509409 AGPAT4Q9NRZ5 378 aa14.69□□□□□ -0.06
TPM3-219ENST00000509409 UTP6Q9NYH9 597 aaKnown RBP14.69□□□□□ -0.06
TPM3-219ENST00000509409 CDC14AQ9UNH5 594 aa14.69□□□□□ -0.06
TPM3-219ENST00000509409 ESPL1Q14674 2120 aa14.69□□□□□ -0.06
TPM3-219ENST00000509409 USP9YO00507 2555 aaPredicted RBP14.69□□□□□ -0.06
TPM3-219ENST00000509409 PRRC2CQ9Y520 2896 aaKnown RBP14.68□□□□□ -0.06
TPM3-219ENST00000509409 SDR42E2A6NKP2 422 aa14.68□□□□□ -0.06
TPM3-219ENST00000509409 NRDCO43847 1150 aa14.68□□□□□ -0.06
TPM3-219ENST00000509409 USP1O94782 785 aa14.68□□□□□ -0.06
TPM3-219ENST00000509409 MED26O95402 600 aa14.68□□□□□ -0.06
TPM3-219ENST00000509409 SYF2O95926 243 aaKnown RBP14.68□□□□□ -0.06
TPM3-219ENST00000509409 HSD17B2P37059 387 aa14.68□□□□□ -0.06
TPM3-219ENST00000509409 PNLIPRP1P54315 467 aa14.68□□□□□ -0.06
TPM3-219ENST00000509409 KLC1Q07866 573 aa14.68□□□□□ -0.06
TPM3-219ENST00000509409 GBX1Q14549 363 aa14.68□□□□□ -0.06
TPM3-219ENST00000509409 KCNJ11Q14654 390 aa14.68□□□□□ -0.06
TPM3-219ENST00000509409 TTLL9Q3SXZ7 439 aa14.68□□□□□ -0.06
TPM3-219ENST00000509409 ANKRD22Q5VYY1 191 aa14.68□□□□□ -0.06
TPM3-219ENST00000509409 CENPUQ71F23 418 aa14.68□□□□□ -0.06
TPM3-219ENST00000509409 RNF44Q7L0R7 432 aa14.68□□□□□ -0.06
TPM3-219ENST00000509409 CILP2Q8IUL8 1156 aa14.68□□□□□ -0.06
TPM3-219ENST00000509409 LRRC8AQ8IWT6 810 aa14.68□□□□□ -0.06
TPM3-219ENST00000509409 OR11G2Q8NGC1 345 aa14.68□□□□□ -0.06
TPM3-219ENST00000509409 INPP5DQ92835 1189 aa14.68□□□□□ -0.06
TPM3-219ENST00000509409 ZNF669Q96BR6 464 aaPredicted RBP14.68□□□□□ -0.06
TPM3-219ENST00000509409 PKP4Q99569 1192 aa14.68□□□□□ -0.06
TPM3-219ENST00000509409 PLCD4Q9BRC7 762 aa14.68□□□□□ -0.06
TPM3-219ENST00000509409 FBXO6Q9NRD1 293 aaPredicted RBP14.68□□□□□ -0.06
TPM3-219ENST00000509409 ENAMQ9NRM1 1142 aa14.68□□□□□ -0.06
TPM3-219ENST00000509409 INTS10Q9NVR2 710 aaKnown RBP14.68□□□□□ -0.06
TPM3-219ENST00000509409 C3orf18Q9UK00 162 aa14.68□□□□□ -0.06
TPM3-219ENST00000509409 PCDHGA10Q9Y5H3 936 aa14.68□□□□□ -0.06
TPM3-219ENST00000509409 CCDC88CQ9P219 2028 aa14.68□□□□□ -0.06
TPM3-219ENST00000509409 USP9XQ93008 2570 aaPredicted RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms