RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 PAPD7Q5XG87 772 aaKnown RBP16.01■□□□□ 0.15
PDLIM7-215ENST00000506161 MBOAT1Q6ZNC8 495 aa16.01■□□□□ 0.15
PDLIM7-215ENST00000506161 KCNMB4Q86W47 210 aa16.01■□□□□ 0.15
PDLIM7-215ENST00000506161 KLHL7Q8IXQ5 586 aa16.01■□□□□ 0.15
PDLIM7-215ENST00000506161 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.01■□□□□ 0.15
PDLIM7-215ENST00000506161 PROKR1Q8TCW9 393 aa16.01■□□□□ 0.15
PDLIM7-215ENST00000506161 SLCO2A1Q92959 643 aa16.01■□□□□ 0.15
PDLIM7-215ENST00000506161 SLC22A18Q96BI1 424 aa16.01■□□□□ 0.15
PDLIM7-215ENST00000506161 C10orf90Q96M02 699 aa16.01■□□□□ 0.15
PDLIM7-215ENST00000506161 NAP1L3Q99457 506 aaPredicted RBP16.01■□□□□ 0.15
PDLIM7-215ENST00000506161 SPSB2Q99619 263 aa16.01■□□□□ 0.15
PDLIM7-215ENST00000506161 DPH2Q9BQC3 489 aaPredicted RBP16.01■□□□□ 0.15
PDLIM7-215ENST00000506161 AARSD1Q9BTE6 412 aaKnown RBP16.01■□□□□ 0.15
PDLIM7-215ENST00000506161 DPH7Q9BTV6 452 aa16.01■□□□□ 0.15
PDLIM7-215ENST00000506161 ENAMQ9NRM1 1142 aa16.01■□□□□ 0.15
PDLIM7-215ENST00000506161 CUTCQ9NTM9 273 aa16.01■□□□□ 0.15
PDLIM7-215ENST00000506161 CUEDC1Q9NWM3 386 aaPredicted RBP16.01■□□□□ 0.15
PDLIM7-215ENST00000506161 LUZP4Q9P127 313 aa16.01■□□□□ 0.15
PDLIM7-215ENST00000506161 CTSFQ9UBX1 484 aa16.01■□□□□ 0.15
PDLIM7-215ENST00000506161 ASIC3Q9UHC3 531 aa16.01■□□□□ 0.15
PDLIM7-215ENST00000506161 PCYOX1Q9UHG3 505 aa16.01■□□□□ 0.15
PDLIM7-215ENST00000506161 SH2B3Q9UQQ2 575 aa16.01■□□□□ 0.15
PDLIM7-215ENST00000506161 SCN2AQ99250 2005 aa16.01■□□□□ 0.15
PDLIM7-215ENST00000506161 MAGEB16A2A368 324 aa16■□□□□ 0.15
PDLIM7-215ENST00000506161 FITM1A5D6W6 292 aa16■□□□□ 0.15
PDLIM7-215ENST00000506161 C9J4A7 227 aa16■□□□□ 0.15
PDLIM7-215ENST00000506161 SLC16A8O95907 504 aa16■□□□□ 0.15
PDLIM7-215ENST00000506161 ALAS2P22557 587 aa16■□□□□ 0.15
PDLIM7-215ENST00000506161 CCNFP41002 786 aa16■□□□□ 0.15
PDLIM7-215ENST00000506161 ZXDCQ2QGD7 858 aaPredicted RBP16■□□□□ 0.15
PDLIM7-215ENST00000506161 WASHC2DQ5SRD0 308 aa16■□□□□ 0.15
PDLIM7-215ENST00000506161 ARMC3Q5W041 872 aa16■□□□□ 0.15
PDLIM7-215ENST00000506161 TRMT10BQ6PF06 316 aaKnown RBP16■□□□□ 0.15
PDLIM7-215ENST00000506161 PAQR7Q86WK9 346 aa16■□□□□ 0.15
PDLIM7-215ENST00000506161 C17orf53Q8N3J3 647 aaPredicted RBP16■□□□□ 0.15
PDLIM7-215ENST00000506161 C2CD4AQ8NCU7 369 aaPredicted RBP16■□□□□ 0.15
PDLIM7-215ENST00000506161 OR2Y1Q8NGV0 311 aa16■□□□□ 0.15
PDLIM7-215ENST00000506161 GSDMBQ8TAX9 411 aa16■□□□□ 0.15
PDLIM7-215ENST00000506161 GRK7Q8WTQ7 553 aa16■□□□□ 0.15
PDLIM7-215ENST00000506161 ASB11Q8WXH4 323 aa16■□□□□ 0.15
PDLIM7-215ENST00000506161 SEC14L1Q92503 715 aa16■□□□□ 0.15
PDLIM7-215ENST00000506161 KCNJ9Q92806 393 aa16■□□□□ 0.15
PDLIM7-215ENST00000506161 FOPNLQ96NB1 174 aa16■□□□□ 0.15
PDLIM7-215ENST00000506161 SELENOSQ9BQE4 189 aa16■□□□□ 0.15
PDLIM7-215ENST00000506161 NDC1Q9BTX1 674 aa16■□□□□ 0.15
PDLIM7-215ENST00000506161 RAB11FIP5Q9BXF6 653 aa16■□□□□ 0.15
PDLIM7-215ENST00000506161 LRRC4CQ9HCJ2 640 aa16■□□□□ 0.15
PDLIM7-215ENST00000506161 TXLNGQ9NUQ3 528 aa16■□□□□ 0.15
PDLIM7-215ENST00000506161 NDOR1Q9UHB4 597 aa16■□□□□ 0.15
PDLIM7-215ENST00000506161 TAC3Q9UHF0 121 aa16■□□□□ 0.15
PDLIM7-215ENST00000506161 SRPK3Q9UPE1 567 aa16■□□□□ 0.15
PDLIM7-215ENST00000506161 PCDHGA9Q9Y5G4 932 aaKnown RBP16■□□□□ 0.15
PDLIM7-215ENST00000506161 MAU2Q9Y6X3 613 aa16■□□□□ 0.15
PDLIM7-215ENST00000506161 USP9YO00507 2555 aaPredicted RBP16■□□□□ 0.15
PDLIM7-215ENST00000506161 A0A1B0GX78 115 aa15.99■□□□□ 0.15
PDLIM7-215ENST00000506161 TARM1B6A8C7 271 aa15.99■□□□□ 0.15
PDLIM7-215ENST00000506161 E7ENX8 843 aa15.99■□□□□ 0.15
PDLIM7-215ENST00000506161 GFYI3L273 518 aa15.99■□□□□ 0.15
PDLIM7-215ENST00000506161 FFAR3O14843 346 aa15.99■□□□□ 0.15
PDLIM7-215ENST00000506161 DSCR3O14972 297 aa15.99■□□□□ 0.15
PDLIM7-215ENST00000506161 GPR42O15529 346 aa15.99■□□□□ 0.15
PDLIM7-215ENST00000506161 ONECUT2O95948 504 aa15.99■□□□□ 0.15
PDLIM7-215ENST00000506161 STATHP02808 62 aa15.99■□□□□ 0.15
PDLIM7-215ENST00000506161 PGAM1P18669 254 aa15.99■□□□□ 0.15
PDLIM7-215ENST00000506161 IMPA1P29218 277 aa15.99■□□□□ 0.15
PDLIM7-215ENST00000506161 FOLR3P41439 243 aa15.99■□□□□ 0.15
PDLIM7-215ENST00000506161 EFNA3P52797 238 aa15.99■□□□□ 0.15
PDLIM7-215ENST00000506161 PNLIPRP1P54315 467 aa15.99■□□□□ 0.15
PDLIM7-215ENST00000506161 CDKN2DP55273 166 aa15.99■□□□□ 0.15
PDLIM7-215ENST00000506161 GNG11P61952 73 aa15.99■□□□□ 0.15
PDLIM7-215ENST00000506161 TAP2Q03519 686 aa15.99■□□□□ 0.15
PDLIM7-215ENST00000506161 TSTA3Q13630 321 aaPredicted RBP15.99■□□□□ 0.15
PDLIM7-215ENST00000506161 BBS9Q3SYG4 887 aa15.99■□□□□ 0.15
PDLIM7-215ENST00000506161 ZNF425Q6IV72 752 aa15.99■□□□□ 0.15
PDLIM7-215ENST00000506161 TTC23LQ6PF05 361 aa15.99■□□□□ 0.15
PDLIM7-215ENST00000506161 NEK10Q6ZWH5 1172 aa15.99■□□□□ 0.15
PDLIM7-215ENST00000506161 PLD3Q8IV08 490 aa15.99■□□□□ 0.15
PDLIM7-215ENST00000506161 ARHGEF39Q8N4T4 335 aa15.99■□□□□ 0.15
PDLIM7-215ENST00000506161 RBMXL3Q8N7X1 1067 aaKnown RBP15.99■□□□□ 0.15
PDLIM7-215ENST00000506161 Q8NA96 180 aa15.99■□□□□ 0.15
PDLIM7-215ENST00000506161 MIB2Q96AX9 1013 aa15.99■□□□□ 0.15
PDLIM7-215ENST00000506161 EBNA1BP2Q99848 306 aaKnown RBP15.99■□□□□ 0.15
PDLIM7-215ENST00000506161 DHRS4Q9BTZ2 278 aa15.99■□□□□ 0.15
PDLIM7-215ENST00000506161 SOX17Q9H6I2 414 aaPredicted RBP15.99■□□□□ 0.15
PDLIM7-215ENST00000506161 ZBTB20Q9HC78 741 aaPredicted RBP15.99■□□□□ 0.15
PDLIM7-215ENST00000506161 ABCF3Q9NUQ8 709 aa15.99■□□□□ 0.15
PDLIM7-215ENST00000506161 IKZF3Q9UKT9 509 aa15.99■□□□□ 0.15
PDLIM7-215ENST00000506161 CHMP2BQ9UQN3 213 aa15.99■□□□□ 0.15
PDLIM7-215ENST00000506161 GOLGA6L10A0A0M3HER8 536 aa15.98■□□□□ 0.15
PDLIM7-215ENST00000506161 H0YGG7 62 aa15.98■□□□□ 0.15
PDLIM7-215ENST00000506161 P2RX6O15547 441 aa15.98■□□□□ 0.15
PDLIM7-215ENST00000506161 TTI1O43156 1089 aa15.98■□□□□ 0.15
PDLIM7-215ENST00000506161 AHSGP02765 367 aa15.98■□□□□ 0.15
PDLIM7-215ENST00000506161 MPC1LP0DKB6 136 aa15.98■□□□□ 0.15
PDLIM7-215ENST00000506161 TCP1P17987 556 aaKnown RBP15.98■□□□□ 0.15
PDLIM7-215ENST00000506161 ELK3P41970 407 aa15.98■□□□□ 0.15
PDLIM7-215ENST00000506161 CARSP49589 748 aaKnown RBP15.98■□□□□ 0.15
PDLIM7-215ENST00000506161 ARF3P61204 181 aaPredicted RBP15.98■□□□□ 0.15
PDLIM7-215ENST00000506161 SSPNQ14714 243 aa15.98■□□□□ 0.15
PDLIM7-215ENST00000506161 FASTKD3Q14CZ7 662 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms