RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 CELF4Q9BZC1 486 aaKnown RBP6.12□□□□□ -1.43
CLCN3-204ENST00000504131 GPN2Q9H9Y4 310 aaPredicted RBP6.12□□□□□ -1.43
CLCN3-204ENST00000504131 COPRSQ9NQ92 184 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 VPS54Q9P1Q0 977 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 CACNG4Q9UBN1 327 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 ADGRG1Q9Y653 693 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 CPS1P31327 1500 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 SSH2Q76I76 1423 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 METTL15A6NJ78 407 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 GRIN3BO60391 1043 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 CD46P15529 392 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 GNAZP19086 355 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 ARL4CP56559 192 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 TARBP2Q15633 366 aaKnown RBP6.11□□□□□ -1.43
CLCN3-204ENST00000504131 NBPF12Q5TAG4 269 aaPredicted RBP6.11□□□□□ -1.43
CLCN3-204ENST00000504131 MOB1BQ7L9L4 216 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 SVOPLQ8N434 492 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 SLC15A4Q8N697 577 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 RNF31Q96EP0 1072 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 CERS2Q96G23 380 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 ZNF347Q96SE7 839 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 SEPT5Q99719 369 aaPredicted RBP6.11□□□□□ -1.43
CLCN3-204ENST00000504131 USE1Q9NZ43 259 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 CTNND2Q9UQB3 1225 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 GMPPBQ9Y5P6 360 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 FAM135BQ49AJ0 1406 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 RIMS1Q86UR5 1692 aaKnown RBP6.11□□□□□ -1.43
CLCN3-204ENST00000504131 LNP1A1A4G5 178 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 E9PAM4 449 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 CLDN4O14493 209 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 STX16O14662 325 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 PEX10O60683 326 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 KITP10721 976 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 PCSK2P16519 638 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 NDUFB7P17568 137 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 UBA1P22314 1058 aaKnown RBP6.11□□□□□ -1.43
CLCN3-204ENST00000504131 MC3RP41968 323 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 CCR6P51684 374 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 RPL26P61254 145 aaKnown RBP6.11□□□□□ -1.43
CLCN3-204ENST00000504131 CDNFQ49AH0 187 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 SLX4IPQ5VYV7 408 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 CHST3Q7LGC8 479 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 NKAIN4Q8IVV8 208 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 GHDCQ8N2G8 530 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 NXPE1Q8N323 547 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 EIF4E3Q8N5X7 224 aaKnown RBP6.11□□□□□ -1.43
CLCN3-204ENST00000504131 OTUB2Q96DC9 234 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 DCUN1D1Q96GG9 259 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 RGCCQ9H4X1 137 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 MINDY3Q9H8M7 445 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 CACYBPQ9HB71 228 aaKnown RBP6.11□□□□□ -1.43
CLCN3-204ENST00000504131 TRMT112Q9UI30 125 aaKnown RBP6.11□□□□□ -1.43
CLCN3-204ENST00000504131 B3GNT3Q9Y2A9 372 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 OR6C75A6NL08 312 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 VSTM2BA6NLU5 285 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 ADRA1DP25100 572 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 PTX3P26022 381 aaPredicted RBP6.11□□□□□ -1.43
CLCN3-204ENST00000504131 HSD11B1P28845 292 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 MC5RP33032 325 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 CRHR1P34998 444 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 MNDAP41218 407 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 ZNF143P52747 638 aaPredicted RBP6.11□□□□□ -1.43
CLCN3-204ENST00000504131 AQP4P55087 323 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 CTSWP56202 376 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 S100A10P60903 97 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 MVKQ03426 396 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 PPATQ06203 517 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 EHHADHQ08426 723 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 RIN1Q13671 783 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 RHEBQ15382 184 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 SF1Q15637 639 aaKnown RBP6.11□□□□□ -1.43
CLCN3-204ENST00000504131 RNLSQ5VYX0 342 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 BRAT1Q6PJG6 821 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 ZBTB49Q6ZSB9 765 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 USP45Q70EL2 814 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 OTOAQ7RTW8 1153 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 NLRP8Q86W28 1048 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 TPCN2Q8NHX9 752 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 BBS10Q8TAM1 723 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 ZNF671Q8TAW3 534 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 ISOC1Q96CN7 298 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 MOCOSQ96EN8 888 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 PRMT7Q9NVM4 692 aaPredicted RBP6.11□□□□□ -1.43
CLCN3-204ENST00000504131 HCN3Q9P1Z3 774 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 HEY2Q9UBP5 337 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 GAB2Q9UQC2 676 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 PKP3Q9Y446 797 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 TRPM1Q7Z4N2 1603 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 STK36Q9NRP7 1315 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 USP54Q70EL1 1684 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 TRABD2BA6NFA1 517 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 RFPL4AA6NLU0 287 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 RFPL4AL1F8VTS6 287 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 PEX12O00623 359 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 PAPSS1O43252 624 aaPredicted RBP6.11□□□□□ -1.43
CLCN3-204ENST00000504131 CASP3P42574 277 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 IDH3GP51553 393 aaPredicted RBP6.11□□□□□ -1.43
CLCN3-204ENST00000504131 NRG3P56975 720 aa6.11□□□□□ -1.43
CLCN3-204ENST00000504131 NKX6-1P78426 367 aaPredicted RBP6.11□□□□□ -1.43
CLCN3-204ENST00000504131 CREMQ03060 361 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms