RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 KLK4Q9Y5K2 254 aa8.12□□□□□ -1.11
HMGXB4-207ENST00000498212 OR2A25A4D2G3 310 aa8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 FITM1A5D6W6 292 aa8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 A6NL46 340 aa8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 USP27XA6NNY8 438 aa8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 PEX12O00623 359 aa8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 NRP2O60462 931 aa8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 DPM1O60762 260 aa8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 VPS26AO75436 327 aa8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 HAUS5O94927 633 aa8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 CCNDBP1O95273 360 aa8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 TTC4O95801 387 aa8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 SYF2O95926 243 aaKnown RBP8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 IGHEP01854 428 aa8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 ALBP02768 609 aa8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 ERVK-10P10266 1014 aa8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 ENO3P13929 434 aaPredicted RBP8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 ITGAXP20702 1163 aa8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 HSD17B2P37059 387 aa8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 PNLIPRP1P54315 467 aa8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 FOXL2P58012 376 aa8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 YBX1P67809 324 aaKnown RBP8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 MPP1Q00013 466 aa8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 DHX9Q08211 1270 aaKnown RBP8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 TSTA3Q13630 321 aaPredicted RBP8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 CRYMQ14894 314 aa8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 HSP90AA5PQ58FG0 334 aa8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 WASHC2DQ5SRD0 308 aa8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 DMRTA1Q5VZB9 504 aa8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 FRMPD2BQ6IN97 320 aa8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 UGT3A1Q6NUS8 523 aa8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 RNF44Q7L0R7 432 aa8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 OVCH1Q7RTY7 1134 aa8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 HPS6Q86YV9 775 aa8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 CPNE9Q8IYJ1 553 aa8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 CLEC1AQ8NC01 280 aa8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 FBXO15Q8NCQ5 510 aaPredicted RBP8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 PPFIBP2Q8ND30 876 aa8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 CD200R1Q8TD46 325 aa8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 ANP32BQ92688 251 aaKnown RBP8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 INPP5DQ92835 1189 aa8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 MIB2Q96AX9 1013 aa8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 PKP4Q99569 1192 aa8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 GPR21Q99679 349 aa8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 ZFYVE21Q9BQ24 234 aa8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 AARSD1Q9BTE6 412 aaKnown RBP8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 DPH7Q9BTV6 452 aa8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 WDR54Q9H977 334 aa8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 SLC6A20Q9NP91 592 aa8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 MRPS30Q9NP92 439 aaKnown RBP8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 SLC22A11Q9NSA0 550 aa8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 P4HTMQ9NXG6 502 aa8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 ZC3H7BQ9UGR2 993 aaKnown RBP8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 TAC3Q9UHF0 121 aa8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 TENM4Q6N022 2769 aa8.11□□□□□ -1.11
HMGXB4-207ENST00000498212 TLN1Q9Y490 2541 aaKnown RBP8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 SCN3AQ9NY46 2000 aa8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 LOC105369274A0A096LPK9 316 aa8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 LOC102723532A0A0G2JNH3 316 aa8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 HYKKA2RU49 373 aa8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 TTLL8A6PVC2 850 aa8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 GFYI3L273 518 aa8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 AGPSO00116 658 aa8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 EIF3FO00303 357 aaPredicted RBP8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 ZBTB14O43829 449 aa8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 BANF1O75531 89 aa8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 SLC16A8O95907 504 aa8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 ONECUT2O95948 504 aa8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 EIF2S1P05198 315 aaKnown RBP8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 UMODP07911 640 aa8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 OR1D4P47884 311 aa8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 MLLT10P55197 1068 aa8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 GNG11P61952 73 aa8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 PRDX1Q06830 199 aaKnown RBP8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 RAPSNQ13702 412 aa8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 NKG7Q16617 165 aa8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 BBS9Q3SYG4 887 aa8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 NADK2Q4G0N4 442 aa8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 SPANXN3Q5MJ09 141 aa8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 DCAF10Q5QP82 559 aa8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 VWA5B1Q5TIE3 1220 aa8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 ICE2Q659A1 982 aa8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 LRRC8EQ6NSJ5 796 aa8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 CYHR1Q6ZMK1 362 aa8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 UBE2R2Q712K3 238 aaPredicted RBP8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 COX15Q7KZN9 410 aa8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 PPP1R32Q7Z5V6 425 aa8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 KLHL7Q8IXQ5 586 aa8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 OR4N4Q8N0Y3 316 aa8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 METTL27Q8N6F8 245 aaPredicted RBP8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 C2CD4AQ8NCU7 369 aaPredicted RBP8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 ZNF480Q8WV37 535 aa8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 ASB11Q8WXH4 323 aa8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 NACC2Q96BF6 587 aa8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 CAPZA3Q96KX2 299 aa8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 RUNDC3BQ96NL0 473 aa8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 SMAD5Q99717 465 aaKnown RBP8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 EBNA1BP2Q99848 306 aaKnown RBP8.1□□□□□ -1.11
HMGXB4-207ENST00000498212 PLCD4Q9BRC7 762 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms