RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 PMS2P54278 862 aa14.73□□□□□ -0.05
NUP50-219ENST00000497960 NAA25Q14CX7 972 aa14.73□□□□□ -0.05
NUP50-219ENST00000497960 EFTUD2Q15029 972 aaKnown RBP eCLIP14.73□□□□□ -0.052e-7■■■■■ 30.8
NUP50-219ENST00000497960 NCF4Q15080 339 aa14.73□□□□□ -0.05
NUP50-219ENST00000497960 CYP2A13Q16696 494 aa14.73□□□□□ -0.05
NUP50-219ENST00000497960 UBAP2Q5T6F2 1119 aaKnown RBP14.73□□□□□ -0.05
NUP50-219ENST00000497960 RHBDD2Q6NTF9 364 aa14.73□□□□□ -0.05
NUP50-219ENST00000497960 WDR93Q6P2C0 686 aa14.73□□□□□ -0.05
NUP50-219ENST00000497960 ZNF549Q6P9A3 640 aa14.73□□□□□ -0.05
NUP50-219ENST00000497960 FAM198BQ6UWH4 519 aa14.73□□□□□ -0.05
NUP50-219ENST00000497960 SLC26A11Q86WA9 606 aa14.73□□□□□ -0.05
NUP50-219ENST00000497960 DENND1AQ8TEH3 1009 aa14.73□□□□□ -0.05
NUP50-219ENST00000497960 INPP5DQ92835 1189 aa14.73□□□□□ -0.05
NUP50-219ENST00000497960 GPN3Q9UHW5 284 aaPredicted RBP14.73□□□□□ -0.05
NUP50-219ENST00000497960 TCFL5Q9UL49 500 aa14.73□□□□□ -0.05
NUP50-219ENST00000497960 PADI2Q9Y2J8 665 aa14.73□□□□□ -0.05
NUP50-219ENST00000497960 DHRS7Q9Y394 339 aa14.73□□□□□ -0.05
NUP50-219ENST00000497960 KRT87PA6NCN2 255 aa14.72□□□□□ -0.05
NUP50-219ENST00000497960 FAM159BA6NKW6 160 aa14.72□□□□□ -0.05
NUP50-219ENST00000497960 ZNF839A8K0R7 811 aa14.72□□□□□ -0.05
NUP50-219ENST00000497960 TARM1B6A8C7 271 aa14.72□□□□□ -0.05
NUP50-219ENST00000497960 H3BMH7 237 aa14.72□□□□□ -0.05
NUP50-219ENST00000497960 J3QKU1 62 aa14.72□□□□□ -0.05
NUP50-219ENST00000497960 MYO1CO00159 1063 aa14.72□□□□□ -0.05
NUP50-219ENST00000497960 PRICKLE3O43900 615 aaPredicted RBP14.72□□□□□ -0.05
NUP50-219ENST00000497960 VPS26AO75436 327 aa14.72□□□□□ -0.05
NUP50-219ENST00000497960 RFPL1O75677 317 aa14.72□□□□□ -0.05
NUP50-219ENST00000497960 PIAS1O75925 651 aa14.72□□□□□ -0.05
NUP50-219ENST00000497960 HAUS5O94927 633 aa14.72□□□□□ -0.05
NUP50-219ENST00000497960 MPC1LP0DKB6 136 aa14.72□□□□□ -0.05
NUP50-219ENST00000497960 CBSLP0DN79 551 aa14.72□□□□□ -0.05
NUP50-219ENST00000497960 CBSP35520 551 aa14.72□□□□□ -0.05
NUP50-219ENST00000497960 HSD17B2P37059 387 aa14.72□□□□□ -0.05
NUP50-219ENST00000497960 GRIA3P42263 894 aa14.72□□□□□ -0.05
NUP50-219ENST00000497960 DCDP81605 110 aaKnown RBP14.72□□□□□ -0.05
NUP50-219ENST00000497960 NAB1Q13506 487 aa14.72□□□□□ -0.05
NUP50-219ENST00000497960 IL10RAQ13651 578 aa14.72□□□□□ -0.05
NUP50-219ENST00000497960 ARHGAP19Q14CB8 494 aa14.72□□□□□ -0.05
NUP50-219ENST00000497960 KBTBD12Q3ZCT8 623 aa14.72□□□□□ -0.05
NUP50-219ENST00000497960 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.72□□□□□ -0.05
NUP50-219ENST00000497960 C1orf189Q5VU69 101 aa14.72□□□□□ -0.05
NUP50-219ENST00000497960 FCRL6Q6DN72 434 aa14.72□□□□□ -0.05
NUP50-219ENST00000497960 UGT3A1Q6NUS8 523 aa14.72□□□□□ -0.05
NUP50-219ENST00000497960 TRMT10CQ7L0Y3 403 aaKnown RBP14.72□□□□□ -0.05
NUP50-219ENST00000497960 STRA8Q7Z7C7 330 aa14.72□□□□□ -0.05
NUP50-219ENST00000497960 GALNT7Q86SF2 657 aa14.72□□□□□ -0.05
NUP50-219ENST00000497960 GIMAP7Q8NHV1 300 aa14.72□□□□□ -0.05
NUP50-219ENST00000497960 SMPDL3AQ92484 453 aa14.72□□□□□ -0.05
NUP50-219ENST00000497960 DLG3Q92796 817 aa14.72□□□□□ -0.05
NUP50-219ENST00000497960 ABHD17AQ96GS6 310 aa14.72□□□□□ -0.05
NUP50-219ENST00000497960 GPR21Q99679 349 aa14.72□□□□□ -0.05
NUP50-219ENST00000497960 SLC30A3Q99726 388 aa14.72□□□□□ -0.05
NUP50-219ENST00000497960 MIPEPQ99797 713 aa14.72□□□□□ -0.05
NUP50-219ENST00000497960 AARSD1Q9BTE6 412 aaKnown RBP14.72□□□□□ -0.05
NUP50-219ENST00000497960 DHRS4Q9BTZ2 278 aa14.72□□□□□ -0.05
NUP50-219ENST00000497960 ZNF71Q9NQZ8 489 aaPredicted RBP14.72□□□□□ -0.05
NUP50-219ENST00000497960 SMYD2Q9NRG4 433 aa14.72□□□□□ -0.05
NUP50-219ENST00000497960 A0A087WUV0 522 aaPredicted RBP14.71□□□□□ -0.05
NUP50-219ENST00000497960 CAPN1P07384 714 aa14.71□□□□□ -0.05
NUP50-219ENST00000497960 CD63P08962 238 aa14.71□□□□□ -0.05
NUP50-219ENST00000497960 PSMB5P28074 263 aa14.71□□□□□ -0.05
NUP50-219ENST00000497960 CMPK1P30085 196 aa14.71□□□□□ -0.05
NUP50-219ENST00000497960 RPA3P35244 121 aaPredicted RBP14.71□□□□□ -0.05
NUP50-219ENST00000497960 ARSFP54793 590 aa14.71□□□□□ -0.05
NUP50-219ENST00000497960 NFKB2Q00653 900 aa14.71□□□□□ -0.05
NUP50-219ENST00000497960 TSTA3Q13630 321 aaPredicted RBP14.71□□□□□ -0.05
NUP50-219ENST00000497960 LACTB2Q53H82 288 aaPredicted RBP14.71□□□□□ -0.05
NUP50-219ENST00000497960 TCTE1Q5JU00 501 aa14.71□□□□□ -0.05
NUP50-219ENST00000497960 MLIPQ5VWP3 458 aa14.71□□□□□ -0.05
NUP50-219ENST00000497960 ZNF385CQ66K41 422 aaPredicted RBP14.71□□□□□ -0.05
NUP50-219ENST00000497960 ATG14Q6ZNE5 492 aa14.71□□□□□ -0.05
NUP50-219ENST00000497960 APLFQ8IW19 511 aaPredicted RBP14.71□□□□□ -0.05
NUP50-219ENST00000497960 PPM1NQ8N819 430 aa14.71□□□□□ -0.05
NUP50-219ENST00000497960 GPATCH11Q8N954 259 aa14.71□□□□□ -0.05
NUP50-219ENST00000497960 OR2L3Q8NG85 312 aa14.71□□□□□ -0.05
NUP50-219ENST00000497960 UHMK1Q8TAS1 419 aaKnown RBP14.71□□□□□ -0.05
NUP50-219ENST00000497960 CD200R1Q8TD46 325 aa14.71□□□□□ -0.05
NUP50-219ENST00000497960 GBP5Q96PP8 586 aa14.71□□□□□ -0.05
NUP50-219ENST00000497960 PKP4Q99569 1192 aa14.71□□□□□ -0.05
NUP50-219ENST00000497960 NDNQ99608 321 aa14.71□□□□□ -0.05
NUP50-219ENST00000497960 CPNE1Q99829 537 aa14.71□□□□□ -0.05
NUP50-219ENST00000497960 SELENOSQ9BQE4 189 aa14.71□□□□□ -0.05
NUP50-219ENST00000497960 PARD6BQ9BYG5 372 aa14.71□□□□□ -0.05
NUP50-219ENST00000497960 IFT80Q9P2H3 777 aaPredicted RBP14.71□□□□□ -0.05
NUP50-219ENST00000497960 DHCR7Q9UBM7 475 aaKnown RBP14.71□□□□□ -0.05
NUP50-219ENST00000497960 NDOR1Q9UHB4 597 aa14.71□□□□□ -0.05
NUP50-219ENST00000497960 TRMT6Q9UJA5 497 aaKnown RBP14.71□□□□□ -0.05
NUP50-219ENST00000497960 CORO1CQ9ULV4 474 aaPredicted RBP14.71□□□□□ -0.05
NUP50-219ENST00000497960 MED16Q9Y2X0 877 aa14.71□□□□□ -0.05
NUP50-219ENST00000497960 PSAT1Q9Y617 370 aa14.71□□□□□ -0.05
NUP50-219ENST00000497960 A0A1W2PPV9 198 aa14.7□□□□□ -0.06
NUP50-219ENST00000497960 CXorf49A8MYA2 514 aaPredicted RBP14.7□□□□□ -0.06
NUP50-219ENST00000497960 EIF3FO00303 357 aaPredicted RBP14.7□□□□□ -0.06
NUP50-219ENST00000497960 RIPK2O43353 540 aa14.7□□□□□ -0.06
NUP50-219ENST00000497960 ZBTB14O43829 449 aa14.7□□□□□ -0.06
NUP50-219ENST00000497960 SRPX2O60687 465 aaPredicted RBP14.7□□□□□ -0.06
NUP50-219ENST00000497960 SYF2O95926 243 aaKnown RBP14.7□□□□□ -0.06
NUP50-219ENST00000497960 CTSBP07858 339 aa14.7□□□□□ -0.06
NUP50-219ENST00000497960 ABHD2P08910 425 aa14.7□□□□□ -0.06
NUP50-219ENST00000497960 ATXN8OSP0DMR3 200 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms