RNA–Protein interactions for RNA: ENST00000497527.1

HPS1-213, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-213ENST00000497527 NDE1Q9NXR1 346 aa11.78□□□□□ -0.52
HPS1-213ENST00000497527 OR6C2Q9NZP2 312 aa11.78□□□□□ -0.52
HPS1-213ENST00000497527 TBC1D29Q9UFV1 150 aa11.78□□□□□ -0.52
HPS1-213ENST00000497527 APOBEC3BQ9UH17 382 aaKnown RBP11.78□□□□□ -0.52
HPS1-213ENST00000497527 CIDEBQ9UHD4 219 aa11.78□□□□□ -0.52
HPS1-213ENST00000497527 EIF3LQ9Y262 564 aaKnown RBP11.78□□□□□ -0.52
HPS1-213ENST00000497527 RRP15Q9Y3B9 282 aaKnown RBP11.78□□□□□ -0.52
HPS1-213ENST00000497527 TSC22D4Q9Y3Q8 395 aa11.78□□□□□ -0.52
HPS1-213ENST00000497527 PCDHB11Q9Y5F2 797 aa11.78□□□□□ -0.52
HPS1-213ENST00000497527 COPG1Q9Y678 874 aaKnown RBP11.78□□□□□ -0.52
HPS1-213ENST00000497527 ABCA7Q8IZY2 2146 aa11.78□□□□□ -0.52
HPS1-213ENST00000497527 SPAG17Q6Q759 2223 aa11.78□□□□□ -0.52
HPS1-213ENST00000497527 TNRC6BQ9UPQ9 1833 aaKnown RBP11.77□□□□□ -0.52
HPS1-213ENST00000497527 CACNA1IQ9P0X4 2223 aa11.77□□□□□ -0.53
HPS1-213ENST00000497527 FAM221BA6H8Z2 402 aa11.77□□□□□ -0.53
HPS1-213ENST00000497527 KRT87PA6NCN2 255 aa11.77□□□□□ -0.53
HPS1-213ENST00000497527 A6NCN8 305 aa11.77□□□□□ -0.53
HPS1-213ENST00000497527 OR52A4PA6NMU1 304 aa11.77□□□□□ -0.53
HPS1-213ENST00000497527 PSMD12O00232 456 aaPredicted RBP11.77□□□□□ -0.53
HPS1-213ENST00000497527 PEX11AO75192 247 aa11.77□□□□□ -0.53
HPS1-213ENST00000497527 FKBP9O95302 570 aa11.77□□□□□ -0.53
HPS1-213ENST00000497527 VIPP01282 170 aa11.77□□□□□ -0.53
HPS1-213ENST00000497527 T-ENOLP0DO92 83 aa11.77□□□□□ -0.53
HPS1-213ENST00000497527 COX4I1P13073 169 aa11.77□□□□□ -0.53
HPS1-213ENST00000497527 ACPPP15309 386 aa11.77□□□□□ -0.53
HPS1-213ENST00000497527 JUNDP17535 347 aa11.77□□□□□ -0.53
HPS1-213ENST00000497527 XRCC1P18887 633 aaPredicted RBP11.77□□□□□ -0.53
HPS1-213ENST00000497527 HRH2P25021 359 aa11.77□□□□□ -0.53
HPS1-213ENST00000497527 SERPINB1P30740 379 aa11.77□□□□□ -0.53
HPS1-213ENST00000497527 HTR6P50406 440 aa11.77□□□□□ -0.53
HPS1-213ENST00000497527 C21orf59P57076 290 aa11.77□□□□□ -0.53
HPS1-213ENST00000497527 CORO7P57737 925 aa11.77□□□□□ -0.53
HPS1-213ENST00000497527 MXRA7P84157 204 aa11.77□□□□□ -0.53
HPS1-213ENST00000497527 EMX2Q04743 252 aa11.77□□□□□ -0.53
HPS1-213ENST00000497527 PDCD4Q53EL6 469 aaKnown RBP11.77□□□□□ -0.53
HPS1-213ENST00000497527 TCHHL1Q5QJ38 904 aaPredicted RBP11.77□□□□□ -0.53
HPS1-213ENST00000497527 C6orf136Q5SQH8 315 aa11.77□□□□□ -0.53
HPS1-213ENST00000497527 DUS1LQ6P1R4 473 aaKnown RBP11.77□□□□□ -0.53
HPS1-213ENST00000497527 Q6ZSR9 355 aa11.77□□□□□ -0.53
HPS1-213ENST00000497527 TAF8Q7Z7C8 310 aa11.77□□□□□ -0.53
HPS1-213ENST00000497527 GKN2Q86XP6 184 aa11.77□□□□□ -0.53
HPS1-213ENST00000497527 TBC1D19Q8N5T2 526 aa11.77□□□□□ -0.53
HPS1-213ENST00000497527 FNDC5Q8NAU1 212 aa11.77□□□□□ -0.53
HPS1-213ENST00000497527 NEIL2Q969S2 332 aa11.77□□□□□ -0.53
HPS1-213ENST00000497527 SLC22A18Q96BI1 424 aa11.77□□□□□ -0.53
HPS1-213ENST00000497527 IL17FQ96PD4 163 aa11.77□□□□□ -0.53
HPS1-213ENST00000497527 AIF1LQ9BQI0 150 aa11.77□□□□□ -0.53
HPS1-213ENST00000497527 BTBD10Q9BSF8 475 aa11.77□□□□□ -0.53
HPS1-213ENST00000497527 MENTQ9BUN1 341 aa11.77□□□□□ -0.53
HPS1-213ENST00000497527 C1orf21Q9H246 121 aa11.77□□□□□ -0.53
HPS1-213ENST00000497527 TM9SF3Q9HD45 589 aa11.77□□□□□ -0.53
HPS1-213ENST00000497527 AIG1Q9NVV5 245 aa11.77□□□□□ -0.53
HPS1-213ENST00000497527 C1orf109Q9NX04 203 aa11.77□□□□□ -0.53
HPS1-213ENST00000497527 ASIC5Q9NY37 505 aa11.77□□□□□ -0.53
HPS1-213ENST00000497527 NOP53Q9NZM5 478 aaKnown RBP11.77□□□□□ -0.53
HPS1-213ENST00000497527 ZIM2Q9NZV7 527 aa11.77□□□□□ -0.53
HPS1-213ENST00000497527 TAAR2Q9P1P5 351 aa11.77□□□□□ -0.53
HPS1-213ENST00000497527 SPASTQ9UBP0 616 aa11.77□□□□□ -0.53
HPS1-213ENST00000497527 SUSD2Q9UGT4 822 aa11.77□□□□□ -0.53
HPS1-213ENST00000497527 TAC3Q9UHF0 121 aa11.77□□□□□ -0.53
HPS1-213ENST00000497527 PLAGL1Q9UM63 463 aa11.77□□□□□ -0.53
HPS1-213ENST00000497527 G3BP2Q9UN86 482 aaKnown RBP11.77□□□□□ -0.53
HPS1-213ENST00000497527 INVSQ9Y283 1065 aa11.77□□□□□ -0.53
HPS1-213ENST00000497527 TMED5Q9Y3A6 229 aa11.77□□□□□ -0.53
HPS1-213ENST00000497527 XIRP2A4UGR9 3374 aa11.77□□□□□ -0.53
HPS1-213ENST00000497527 DYTNA2CJ06 578 aa11.76□□□□□ -0.53
HPS1-213ENST00000497527 BBIP1A8MTZ0 92 aa11.76□□□□□ -0.53
HPS1-213ENST00000497527 B2RBV5 119 aa11.76□□□□□ -0.53
HPS1-213ENST00000497527 H0YHG0 523 aa11.76□□□□□ -0.53
HPS1-213ENST00000497527 LSM1O15116 133 aaKnown RBP11.76□□□□□ -0.53
HPS1-213ENST00000497527 VILLO15195 856 aa11.76□□□□□ -0.53
HPS1-213ENST00000497527 BCAT2O15382 392 aaPredicted RBP11.76□□□□□ -0.53
HPS1-213ENST00000497527 GYG2O15488 501 aa11.76□□□□□ -0.53
HPS1-213ENST00000497527 MYO1DO94832 1006 aa11.76□□□□□ -0.53
HPS1-213ENST00000497527 PDYNP01213 254 aa11.76□□□□□ -0.53
HPS1-213ENST00000497527 CSF2P04141 144 aa11.76□□□□□ -0.53
HPS1-213ENST00000497527 GNSP15586 552 aa11.76□□□□□ -0.53
HPS1-213ENST00000497527 BCKDHBP21953 392 aa11.76□□□□□ -0.53
HPS1-213ENST00000497527 GSTM2P28161 218 aa11.76□□□□□ -0.53
HPS1-213ENST00000497527 DPP6P42658 865 aa11.76□□□□□ -0.53
HPS1-213ENST00000497527 CCR8P51685 355 aa11.76□□□□□ -0.53
HPS1-213ENST00000497527 AFF3P51826 1226 aaKnown RBP11.76□□□□□ -0.53
HPS1-213ENST00000497527 HNRNPKP61978 463 aaKnown RBP eCLIP11.76□□□□□ -0.53
HPS1-213ENST00000497527 STX5Q13190 355 aa11.76□□□□□ -0.53
HPS1-213ENST00000497527 CYLC2Q14093 348 aaPredicted RBP11.76□□□□□ -0.53
HPS1-213ENST00000497527 SPRED3Q2MJR0 410 aa11.76□□□□□ -0.53
HPS1-213ENST00000497527 AP5B1Q2VPB7 878 aa11.76□□□□□ -0.53
HPS1-213ENST00000497527 CACHD1Q5VU97 1274 aa11.76□□□□□ -0.53
HPS1-213ENST00000497527 ICE2Q659A1 982 aa11.76□□□□□ -0.53
HPS1-213ENST00000497527 TMEM198Q66K66 360 aa11.76□□□□□ -0.53
HPS1-213ENST00000497527 IYDQ6PHW0 289 aa11.76□□□□□ -0.53
HPS1-213ENST00000497527 SCIMPQ6UWF3 145 aa11.76□□□□□ -0.53
HPS1-213ENST00000497527 SUSD1Q6UWL2 747 aa11.76□□□□□ -0.53
HPS1-213ENST00000497527 ASRGL1Q7L266 308 aa11.76□□□□□ -0.53
HPS1-213ENST00000497527 ZFAND4Q86XD8 727 aa11.76□□□□□ -0.53
HPS1-213ENST00000497527 NRROSQ86YC3 692 aa11.76□□□□□ -0.53
HPS1-213ENST00000497527 LAS2Q8IYD9 372 aa11.76□□□□□ -0.53
HPS1-213ENST00000497527 DEFB119Q8N690 84 aa11.76□□□□□ -0.53
HPS1-213ENST00000497527 OR2T11Q8NH01 316 aa11.76□□□□□ -0.53
HPS1-213ENST00000497527 WDR20Q8TBZ3 569 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms