RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 SP140Q13342 867 aa15.06■□□□□ 0
HDAC4-213ENST00000496347 FASTKQ14296 549 aaKnown RBP15.06■□□□□ 0
HDAC4-213ENST00000496347 SSPNQ14714 243 aa15.06■□□□□ 0
HDAC4-213ENST00000496347 MLIPQ5VWP3 458 aa15.06■□□□□ 0
HDAC4-213ENST00000496347 UGT3A1Q6NUS8 523 aa15.06■□□□□ 0
HDAC4-213ENST00000496347 TTLL10Q6ZVT0 673 aa15.06■□□□□ 0
HDAC4-213ENST00000496347 HPS6Q86YV9 775 aa15.06■□□□□ 0
HDAC4-213ENST00000496347 CREG2Q8IUH2 290 aa15.06■□□□□ 0
HDAC4-213ENST00000496347 PDIK1LQ8N165 341 aa15.06■□□□□ 0
HDAC4-213ENST00000496347 ASB11Q8WXH4 323 aa15.06■□□□□ 0
HDAC4-213ENST00000496347 NACC2Q96BF6 587 aa15.06■□□□□ 0
HDAC4-213ENST00000496347 LRRC39Q96DD0 335 aa15.06■□□□□ 0
HDAC4-213ENST00000496347 CAPZA3Q96KX2 299 aa15.06■□□□□ 0
HDAC4-213ENST00000496347 SLC30A3Q99726 388 aa15.06■□□□□ 0
HDAC4-213ENST00000496347 ZFYVE21Q9BQ24 234 aa15.06■□□□□ 0
HDAC4-213ENST00000496347 AARSD1Q9BTE6 412 aaKnown RBP15.06■□□□□ 0
HDAC4-213ENST00000496347 SLC26A1Q9H2B4 701 aa15.06■□□□□ 0
HDAC4-213ENST00000496347 IARS2Q9NSE4 1012 aaKnown RBP15.06■□□□□ 0
HDAC4-213ENST00000496347 UTP6Q9NYH9 597 aaKnown RBP15.06■□□□□ 0
HDAC4-213ENST00000496347 TRMT6Q9UJA5 497 aaKnown RBP15.06■□□□□ 0
HDAC4-213ENST00000496347 USP9XQ93008 2570 aaPredicted RBP15.05■□□□□ 0
HDAC4-213ENST00000496347 GFYI3L273 518 aa15.05■□□□□ -0
HDAC4-213ENST00000496347 K7EM74 188 aa15.05■□□□□ -0
HDAC4-213ENST00000496347 ALBP02768 609 aa15.05■□□□□ -0
HDAC4-213ENST00000496347 F7P08709 466 aaPredicted RBP15.05■□□□□ -0
HDAC4-213ENST00000496347 ERVK-10P10266 1014 aa15.05■□□□□ -0
HDAC4-213ENST00000496347 EZRP15311 586 aaKnown RBP15.05■□□□□ -0
HDAC4-213ENST00000496347 ITGAXP20702 1163 aa15.05■□□□□ -0
HDAC4-213ENST00000496347 IVDP26440 423 aa15.05■□□□□ -0
HDAC4-213ENST00000496347 SKIV2L2P42285 1042 aaKnown RBP15.05■□□□□ -0
HDAC4-213ENST00000496347 PNLIPRP1P54315 467 aa15.05■□□□□ -0
HDAC4-213ENST00000496347 SLC9A5Q14940 896 aa15.05■□□□□ -0
HDAC4-213ENST00000496347 HIF1AQ16665 826 aa15.05■□□□□ -0
HDAC4-213ENST00000496347 FAM214AQ32MH5 1076 aa15.05■□□□□ -0
HDAC4-213ENST00000496347 CPNE9Q8IYJ1 553 aa15.05■□□□□ -0
HDAC4-213ENST00000496347 TEX19Q8NA77 164 aa15.05■□□□□ -0
HDAC4-213ENST00000496347 PTERQ96BW5 349 aa15.05■□□□□ -0
HDAC4-213ENST00000496347 CERS2Q96G23 380 aa15.05■□□□□ -0
HDAC4-213ENST00000496347 FER1L6-AS2Q96M78 137 aa15.05■□□□□ -0
HDAC4-213ENST00000496347 PKP4Q99569 1192 aa15.05■□□□□ -0
HDAC4-213ENST00000496347 DPH7Q9BTV6 452 aa15.05■□□□□ -0
HDAC4-213ENST00000496347 SLC6A20Q9NP91 592 aa15.05■□□□□ -0
HDAC4-213ENST00000496347 MRPS30Q9NP92 439 aaKnown RBP15.05■□□□□ -0
HDAC4-213ENST00000496347 RNF14Q9UBS8 474 aa15.05■□□□□ -0
HDAC4-213ENST00000496347 TAC3Q9UHF0 121 aa15.05■□□□□ -0
HDAC4-213ENST00000496347 CORO1CQ9ULV4 474 aaPredicted RBP15.05■□□□□ -0
HDAC4-213ENST00000496347 ZNF451Q9Y4E5 1061 aa15.05■□□□□ -0
HDAC4-213ENST00000496347 SPTAN1Q13813 2472 aaKnown RBP15.05■□□□□ -0
HDAC4-213ENST00000496347 PEX12O00623 359 aa15.04■□□□□ -0
HDAC4-213ENST00000496347 NDC80O14777 642 aa15.04■□□□□ -0
HDAC4-213ENST00000496347 ZBTB14O43829 449 aa15.04■□□□□ -0
HDAC4-213ENST00000496347 CNOT3O75175 753 aaKnown RBP15.04■□□□□ -0
HDAC4-213ENST00000496347 SEC31AO94979 1220 aaKnown RBP15.04■□□□□ -0
HDAC4-213ENST00000496347 PDGFAP04085 211 aa15.04■□□□□ -0
HDAC4-213ENST00000496347 ALAS2P22557 587 aa15.04■□□□□ -0
HDAC4-213ENST00000496347 MCM3P25205 808 aa15.04■□□□□ -0
HDAC4-213ENST00000496347 RGS4P49798 205 aa15.04■□□□□ -0
HDAC4-213ENST00000496347 EMP3P54852 163 aa15.04■□□□□ -0
HDAC4-213ENST00000496347 VSX2P58304 361 aaPredicted RBP15.04■□□□□ -0
HDAC4-213ENST00000496347 ABATP80404 500 aa15.04■□□□□ -0
HDAC4-213ENST00000496347 FOXK1P85037 733 aa15.04■□□□□ -0
HDAC4-213ENST00000496347 RELAQ04206 551 aa15.04■□□□□ -0
HDAC4-213ENST00000496347 BBS9Q3SYG4 887 aa15.04■□□□□ -0
HDAC4-213ENST00000496347 MSS51Q4VC12 460 aa15.04■□□□□ -0
HDAC4-213ENST00000496347 ICE2Q659A1 982 aa15.04■□□□□ -0
HDAC4-213ENST00000496347 PRMT9Q6P2P2 845 aa15.04■□□□□ -0
HDAC4-213ENST00000496347 PIWIL4Q7Z3Z4 852 aaKnown RBP15.04■□□□□ -0
HDAC4-213ENST00000496347 KLHL7Q8IXQ5 586 aa15.04■□□□□ -0
HDAC4-213ENST00000496347 CLEC1AQ8NC01 280 aa15.04■□□□□ -0
HDAC4-213ENST00000496347 ZNF480Q8WV37 535 aa15.04■□□□□ -0
HDAC4-213ENST00000496347 SNF8Q96H20 258 aa15.04■□□□□ -0
HDAC4-213ENST00000496347 PLCD4Q9BRC7 762 aa15.04■□□□□ -0
HDAC4-213ENST00000496347 ACAT2Q9BWD1 397 aa15.04■□□□□ -0
HDAC4-213ENST00000496347 SLC22A11Q9NSA0 550 aa15.04■□□□□ -0
HDAC4-213ENST00000496347 GPR83Q9NYM4 423 aa15.04■□□□□ -0
HDAC4-213ENST00000496347 TAS2R13Q9NYV9 303 aa15.04■□□□□ -0
HDAC4-213ENST00000496347 IGKV1-8A0A0C4DH67 115 aa15.03■□□□□ -0
HDAC4-213ENST00000496347 A0A0J9YVX5 310 aa15.03■□□□□ -0
HDAC4-213ENST00000496347 HYKKA2RU49 373 aa15.03■□□□□ -0
HDAC4-213ENST00000496347 E7ENX8 843 aa15.03■□□□□ -0
HDAC4-213ENST00000496347 NRP2O60462 931 aa15.03■□□□□ -0
HDAC4-213ENST00000496347 KLHL41O60662 606 aa15.03■□□□□ -0
HDAC4-213ENST00000496347 BANF1O75531 89 aa15.03■□□□□ -0
HDAC4-213ENST00000496347 HAUS5O94927 633 aa15.03■□□□□ -0
HDAC4-213ENST00000496347 SYF2O95926 243 aaKnown RBP15.03■□□□□ -0
HDAC4-213ENST00000496347 C8GP07360 202 aa15.03■□□□□ -0
HDAC4-213ENST00000496347 UMODP07911 640 aa15.03■□□□□ -0
HDAC4-213ENST00000496347 PAFAH1B1P43034 410 aa15.03■□□□□ -0
HDAC4-213ENST00000496347 CCL11P51671 97 aa15.03■□□□□ -0
HDAC4-213ENST00000496347 TAP2Q03519 686 aa15.03■□□□□ -0
HDAC4-213ENST00000496347 PRDX1Q06830 199 aaKnown RBP15.03■□□□□ -0
HDAC4-213ENST00000496347 FRG1Q14331 258 aaKnown RBP15.03■□□□□ -0
HDAC4-213ENST00000496347 MUM1Q2TAK8 710 aa15.03■□□□□ -0
HDAC4-213ENST00000496347 DCAF10Q5QP82 559 aa15.03■□□□□ -0
HDAC4-213ENST00000496347 WASHC2DQ5SRD0 308 aa15.03■□□□□ -0
HDAC4-213ENST00000496347 VWA5B1Q5TIE3 1220 aa15.03■□□□□ -0
HDAC4-213ENST00000496347 STEAP4Q687X5 459 aa15.03■□□□□ -0
HDAC4-213ENST00000496347 FRMPD2BQ6IN97 320 aa15.03■□□□□ -0
HDAC4-213ENST00000496347 ZNF425Q6IV72 752 aa15.03■□□□□ -0
HDAC4-213ENST00000496347 HIBCHQ6NVY1 386 aaPredicted RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms