RNA–Protein interactions for RNA: ENST00000493736.5

SORT1-207, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-207ENST00000493736 ANAPC5Q9UJX4 755 aa4.95□□□□□ -1.62
SORT1-207ENST00000493736 VPS28Q9UK41 221 aa4.95□□□□□ -1.62
SORT1-207ENST00000493736 CCL26Q9Y258 94 aa4.95□□□□□ -1.62
SORT1-207ENST00000493736 SNX24Q9Y343 169 aa4.95□□□□□ -1.62
SORT1-207ENST00000493736 MFHAS1Q9Y4C4 1052 aa4.95□□□□□ -1.62
SORT1-207ENST00000493736 IGKV2D-30A0A075B6S6 120 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.94□□□□□ -1.62
SORT1-207ENST00000493736 SLC22A23A1A5C7 686 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 C5orf60A6NFR6 353 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.94□□□□□ -1.62
SORT1-207ENST00000493736 H3BQ06 376 aaPredicted RBP4.94□□□□□ -1.62
SORT1-207ENST00000493736 KCNK1O00180 336 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 AP3B1O00203 1094 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 DNALI1O14645 258 aaPredicted RBP4.94□□□□□ -1.62
SORT1-207ENST00000493736 CHADO15335 359 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 ZSCAN9O15535 394 aaPredicted RBP4.94□□□□□ -1.62
SORT1-207ENST00000493736 ECI2O75521 394 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 JCHAINP01591 159 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 ATP5BP06576 529 aaKnown RBP4.94□□□□□ -1.62
SORT1-207ENST00000493736 APRTP07741 180 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 PSMC3P17980 439 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 POLR2EP19388 210 aaKnown RBP4.94□□□□□ -1.62
SORT1-207ENST00000493736 MATN1P21941 496 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 SP100P23497 879 aaPredicted RBP4.94□□□□□ -1.62
SORT1-207ENST00000493736 TNFRSF8P28908 595 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 RPL22P35268 128 aaKnown RBP4.94□□□□□ -1.62
SORT1-207ENST00000493736 HSPA9P38646 679 aaKnown RBP4.94□□□□□ -1.62
SORT1-207ENST00000493736 RPL21P46778 160 aaKnown RBP4.94□□□□□ -1.62
SORT1-207ENST00000493736 DRG2P55039 364 aaKnown RBP4.94□□□□□ -1.62
SORT1-207ENST00000493736 GEMP55040 296 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 PLTPP55058 493 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 ARL4CP56559 192 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 ST8SIA6P61647 398 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 VSNL1P62760 191 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 SULT2A1Q06520 285 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 HNRNPDQ14103 355 aaKnown RBP4.94□□□□□ -1.62
SORT1-207ENST00000493736 DMC1Q14565 340 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 SLMAPQ14BN4 828 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 MORF4L2Q15014 288 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 PARP6Q2NL67 630 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 C5orf22Q49AR2 442 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 TEX44Q53QW1 395 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 DNAJC21Q5F1R6 531 aaKnown RBP4.94□□□□□ -1.62
SORT1-207ENST00000493736 TMEM196Q5HYL7 178 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 FAM78AQ5JUQ0 283 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 ANKRD20A2Q5SQ80 823 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 MANEAQ5SRI9 462 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 ANKRD20A1Q5TYW2 823 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 ANKRD20A3Q5VUR7 823 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 DUPD1Q68J44 220 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 EMBQ6PCB8 327 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 CENPUQ71F23 418 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 B4GALNT4Q76KP1 1039 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 CCDC25Q86WR0 208 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 MFSD6LQ8IWD5 586 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 ARHGAP12Q8IWW6 846 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 FAM217AQ8IXS0 508 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 ZNF683Q8IZ20 524 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 PDIK1LQ8N165 341 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 DEFB123Q8N688 67 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 DNAAF3Q8N9W5 541 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 CCDC110Q8TBZ0 833 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 WFIKKN2Q8TEU8 576 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 WIPF2Q8TF74 440 aaPredicted RBP4.94□□□□□ -1.62
SORT1-207ENST00000493736 UCMAQ8WVF2 138 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 IGFBPL1Q8WX77 278 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 ARHGEF2Q92974 986 aaKnown RBP4.94□□□□□ -1.62
SORT1-207ENST00000493736 ELSPBP1Q96BH3 223 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 RTP4Q96DX8 246 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 ZNF599Q96NL3 588 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 TSGA13Q96PP4 275 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 TUBB6Q9BUF5 446 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 TRMT61BQ9BVS5 477 aaKnown RBP4.94□□□□□ -1.62
SORT1-207ENST00000493736 SLC2A11Q9BYW1 496 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 FRMD8Q9BZ67 464 aaPredicted RBP4.94□□□□□ -1.62
SORT1-207ENST00000493736 POLR1EQ9GZS1 481 aaKnown RBP4.94□□□□□ -1.62
SORT1-207ENST00000493736 GBA3Q9H227 469 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 POMKQ9H5K3 350 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 C10orf88Q9H8K7 445 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 ANKZF1Q9H8Y5 726 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 TRPV4Q9HBA0 871 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 MLXIPLQ9NP71 852 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 NT5MQ9NPB1 228 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 GDF3Q9NR23 364 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 ABCB8Q9NUT2 735 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 DNAJC17Q9NVM6 304 aaKnown RBP4.94□□□□□ -1.62
SORT1-207ENST00000493736 RBM22Q9NW64 420 aaKnown RBP eCLIP4.94□□□□□ -1.62
SORT1-207ENST00000493736 PLK2Q9NYY3 685 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 NFU1Q9UMS0 254 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 NEU3Q9UQ49 428 aa4.94□□□□□ -1.62
SORT1-207ENST00000493736 AAR2Q9Y312 384 aaKnown RBP4.94□□□□□ -1.62
SORT1-207ENST00000493736 ERI2A8K979 691 aaKnown RBP4.93□□□□□ -1.62
SORT1-207ENST00000493736 F5H423 210 aaPredicted RBP4.93□□□□□ -1.62
SORT1-207ENST00000493736 HOXC11O43248 304 aaPredicted RBP4.93□□□□□ -1.62
SORT1-207ENST00000493736 KDELR3O43731 214 aa4.93□□□□□ -1.62
SORT1-207ENST00000493736 PRAMEF11O60813 436 aa4.93□□□□□ -1.62
SORT1-207ENST00000493736 CBFA2T3O75081 653 aa4.93□□□□□ -1.62
SORT1-207ENST00000493736 SEC31AO94979 1220 aaKnown RBP4.93□□□□□ -1.62
SORT1-207ENST00000493736 PENKP01210 267 aaPredicted RBP4.93□□□□□ -1.62
SORT1-207ENST00000493736 ALPLP05186 524 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms