RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 IGFBP4P22692 258 aa13.59□□□□□ -0.23
PTPN7-216ENST00000492977 HSD17B2P37059 387 aa13.59□□□□□ -0.23
PTPN7-216ENST00000492977 EEFSECP57772 596 aaKnown RBP13.59□□□□□ -0.23
PTPN7-216ENST00000492977 MRPS22P82650 360 aaKnown RBP13.59□□□□□ -0.23
PTPN7-216ENST00000492977 TAP2Q03519 686 aa13.59□□□□□ -0.23
PTPN7-216ENST00000492977 PWP1Q13610 501 aa13.59□□□□□ -0.23
PTPN7-216ENST00000492977 ARHGAP19Q14CB8 494 aa13.59□□□□□ -0.23
PTPN7-216ENST00000492977 TAF11Q15544 211 aa13.59□□□□□ -0.23
PTPN7-216ENST00000492977 FBXO43Q4G163 708 aa13.59□□□□□ -0.23
PTPN7-216ENST00000492977 C6orf10Q5SRN2 563 aa13.59□□□□□ -0.23
PTPN7-216ENST00000492977 TBC1D3GQ6DHY5 549 aa13.59□□□□□ -0.23
PTPN7-216ENST00000492977 TBC1D3CQ6IPX1 549 aa13.59□□□□□ -0.23
PTPN7-216ENST00000492977 DLEU7Q6UYE1 221 aa13.59□□□□□ -0.23
PTPN7-216ENST00000492977 RNF111Q6ZNA4 994 aa13.59□□□□□ -0.23
PTPN7-216ENST00000492977 SPATA24Q86W54 205 aa13.59□□□□□ -0.23
PTPN7-216ENST00000492977 DHFR2Q86XF0 187 aa13.59□□□□□ -0.23
PTPN7-216ENST00000492977 TMEM126BQ8IUX1 230 aa13.59□□□□□ -0.23
PTPN7-216ENST00000492977 TBC1D3Q8IZP1 549 aaPredicted RBP13.59□□□□□ -0.23
PTPN7-216ENST00000492977 KLK6Q92876 244 aa13.59□□□□□ -0.23
PTPN7-216ENST00000492977 NEIL2Q969S2 332 aa13.59□□□□□ -0.23
PTPN7-216ENST00000492977 DUS3LQ96G46 650 aaKnown RBP13.59□□□□□ -0.23
PTPN7-216ENST00000492977 RSRC1Q96IZ7 334 aaKnown RBP13.59□□□□□ -0.23
PTPN7-216ENST00000492977 FCRL1Q96LA6 429 aa13.59□□□□□ -0.23
PTPN7-216ENST00000492977 UHRF1Q96T88 793 aaPredicted RBP13.59□□□□□ -0.23
PTPN7-216ENST00000492977 EFCAB11Q9BUY7 163 aa13.59□□□□□ -0.23
PTPN7-216ENST00000492977 SLC6A17Q9H1V8 727 aa13.59□□□□□ -0.23
PTPN7-216ENST00000492977 TTYH1Q9H313 450 aaPredicted RBP13.59□□□□□ -0.23
PTPN7-216ENST00000492977 PRO3102Q9H379 93 aa13.59□□□□□ -0.23
PTPN7-216ENST00000492977 SGK2Q9HBY8 427 aa13.59□□□□□ -0.23
PTPN7-216ENST00000492977 VPS29Q9UBQ0 182 aa13.59□□□□□ -0.23
PTPN7-216ENST00000492977 LIMD1Q9UGP4 676 aa13.59□□□□□ -0.23
PTPN7-216ENST00000492977 C5orf42Q9H799 3197 aa13.59□□□□□ -0.23
PTPN7-216ENST00000492977 DOCK9Q9BZ29 2069 aa13.58□□□□□ -0.23
PTPN7-216ENST00000492977 PRR23AA6NEV1 266 aa13.58□□□□□ -0.23
PTPN7-216ENST00000492977 H3BQ06 376 aaPredicted RBP13.58□□□□□ -0.23
PTPN7-216ENST00000492977 CASQ2O14958 399 aaPredicted RBP13.58□□□□□ -0.23
PTPN7-216ENST00000492977 DNAJA2O60884 412 aa13.58□□□□□ -0.23
PTPN7-216ENST00000492977 HOXB3P14651 431 aaPredicted RBP13.58□□□□□ -0.23
PTPN7-216ENST00000492977 DGKQP52824 942 aa13.58□□□□□ -0.23
PTPN7-216ENST00000492977 RHDQ02161 417 aa13.58□□□□□ -0.23
PTPN7-216ENST00000492977 EOGTQ5NDL2 527 aa13.58□□□□□ -0.23
PTPN7-216ENST00000492977 ATG9BQ674R7 924 aa13.58□□□□□ -0.23
PTPN7-216ENST00000492977 NANOGP8Q6NSW7 305 aa13.58□□□□□ -0.23
PTPN7-216ENST00000492977 MED27Q6P2C8 311 aa13.58□□□□□ -0.23
PTPN7-216ENST00000492977 SLC2A7Q6PXP3 512 aa13.58□□□□□ -0.23
PTPN7-216ENST00000492977 KIAA2013Q8IYS2 634 aa13.58□□□□□ -0.23
PTPN7-216ENST00000492977 PQLC1Q8N2U9 271 aa13.58□□□□□ -0.23
PTPN7-216ENST00000492977 OR5K2Q8NHB8 316 aa13.58□□□□□ -0.23
PTPN7-216ENST00000492977 DNAJB8Q8NHS0 232 aa13.58□□□□□ -0.23
PTPN7-216ENST00000492977 DNAJB14Q8TBM8 379 aa13.58□□□□□ -0.23
PTPN7-216ENST00000492977 SLC13A3Q8WWT9 602 aa13.58□□□□□ -0.23
PTPN7-216ENST00000492977 APIPQ96GX9 242 aa13.58□□□□□ -0.23
PTPN7-216ENST00000492977 MSANTD3Q96H12 275 aa13.58□□□□□ -0.23
PTPN7-216ENST00000492977 TIMM29Q9BSF4 260 aa13.58□□□□□ -0.23
PTPN7-216ENST00000492977 OSBPL6Q9BZF3 934 aa13.58□□□□□ -0.23
PTPN7-216ENST00000492977 TRIM15Q9C019 465 aa13.58□□□□□ -0.23
PTPN7-216ENST00000492977 NANOGQ9H9S0 305 aa13.58□□□□□ -0.23
PTPN7-216ENST00000492977 CCDC177Q9NQR7 707 aaPredicted RBP13.58□□□□□ -0.23
PTPN7-216ENST00000492977 SLC17A4Q9Y2C5 497 aa13.58□□□□□ -0.23
PTPN7-216ENST00000492977 DLGAP4Q9Y2H0 992 aa13.58□□□□□ -0.23
PTPN7-216ENST00000492977 TCRBV3S1A0A5B6 114 aa13.58□□□□□ -0.24
PTPN7-216ENST00000492977 ZNF839A8K0R7 811 aa13.58□□□□□ -0.24
PTPN7-216ENST00000492977 KCNH1O95259 989 aa13.58□□□□□ -0.24
PTPN7-216ENST00000492977 PGRP06401 933 aa13.58□□□□□ -0.24
PTPN7-216ENST00000492977 HOXC4P09017 264 aaPredicted RBP13.58□□□□□ -0.24
PTPN7-216ENST00000492977 C1GALT1C1LP0DN25 315 aa13.58□□□□□ -0.24
PTPN7-216ENST00000492977 ACADMP11310 421 aa13.58□□□□□ -0.24
PTPN7-216ENST00000492977 ACADSP16219 412 aa13.58□□□□□ -0.24
PTPN7-216ENST00000492977 ATP6V1C1P21283 382 aa13.58□□□□□ -0.24
PTPN7-216ENST00000492977 IGFALSP35858 605 aa13.58□□□□□ -0.24
PTPN7-216ENST00000492977 LAPTM5Q13571 262 aa13.58□□□□□ -0.24
PTPN7-216ENST00000492977 MAPKAPK3Q16644 382 aa13.58□□□□□ -0.24
PTPN7-216ENST00000492977 HIST2H2ACQ16777 129 aaPredicted RBP13.58□□□□□ -0.24
PTPN7-216ENST00000492977 LRIT3Q3SXY7 679 aa13.58□□□□□ -0.24
PTPN7-216ENST00000492977 FAM174BQ3ZCQ3 159 aa13.58□□□□□ -0.24
PTPN7-216ENST00000492977 PAGE2BQ5JRK9 111 aa13.58□□□□□ -0.24
PTPN7-216ENST00000492977 IRAK1BP1Q5VVH5 260 aa13.58□□□□□ -0.24
PTPN7-216ENST00000492977 HIST2H2AA3Q6FI13 130 aa13.58□□□□□ -0.24
PTPN7-216ENST00000492977 NOXRED1Q6NXP6 359 aa13.58□□□□□ -0.24
PTPN7-216ENST00000492977 LCTLQ6UWM7 567 aa13.58□□□□□ -0.24
PTPN7-216ENST00000492977 GOLM1Q8NBJ4 401 aa13.58□□□□□ -0.24
PTPN7-216ENST00000492977 PHC3Q8NDX5 983 aa13.58□□□□□ -0.24
PTPN7-216ENST00000492977 OR7G3Q8NG95 312 aa13.58□□□□□ -0.24
PTPN7-216ENST00000492977 OR5AR1Q8NGP9 310 aa13.58□□□□□ -0.24
PTPN7-216ENST00000492977 TESCQ96BS2 214 aa13.58□□□□□ -0.24
PTPN7-216ENST00000492977 POM121Q96HA1 1249 aa13.58□□□□□ -0.24
PTPN7-216ENST00000492977 NAF1Q96HR8 494 aaKnown RBP13.58□□□□□ -0.24
PTPN7-216ENST00000492977 LRGUKQ96M69 825 aa13.58□□□□□ -0.24
PTPN7-216ENST00000492977 MTERF1Q99551 399 aaKnown RBP13.58□□□□□ -0.24
PTPN7-216ENST00000492977 CGREF1Q99674 301 aa13.58□□□□□ -0.24
PTPN7-216ENST00000492977 HAUS8Q9BT25 410 aa13.58□□□□□ -0.24
PTPN7-216ENST00000492977 APOOQ9BUR5 198 aa13.58□□□□□ -0.24
PTPN7-216ENST00000492977 TM7SF3Q9NS93 570 aa13.58□□□□□ -0.24
PTPN7-216ENST00000492977 SLAMF8Q9P0V8 285 aa13.58□□□□□ -0.24
PTPN7-216ENST00000492977 ACTR3BQ9P1U1 418 aa13.58□□□□□ -0.24
PTPN7-216ENST00000492977 RUVBL1Q9Y265 456 aaKnown RBP13.58□□□□□ -0.24
PTPN7-216ENST00000492977 PRSS51A0A1B0GVH4 220 aa13.57□□□□□ -0.24
PTPN7-216ENST00000492977 CACNB4O00305 520 aaPredicted RBP13.57□□□□□ -0.24
PTPN7-216ENST00000492977 FOXE1O00358 373 aaPredicted RBP13.57□□□□□ -0.24
PTPN7-216ENST00000492977 PEX1O43933 1283 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms