RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 HM13Q8TCT9 377 aa12.08□□□□□ -0.48
HMGN1-220ENST00000492280 MAL2Q969L2 176 aa12.08□□□□□ -0.48
HMGN1-220ENST00000492280 RHNO1Q9BSD3 238 aa12.08□□□□□ -0.48
HMGN1-220ENST00000492280 CXorf21Q9HAI6 301 aa12.08□□□□□ -0.48
HMGN1-220ENST00000492280 ZNF639Q9UID6 485 aa12.08□□□□□ -0.48
HMGN1-220ENST00000492280 SNX6Q9UNH7 406 aa12.08□□□□□ -0.48
HMGN1-220ENST00000492280 F5P12259 2224 aa12.08□□□□□ -0.48
HMGN1-220ENST00000492280 MAGEB17A8MXT2 336 aa12.07□□□□□ -0.48
HMGN1-220ENST00000492280 ARHGEF15O94989 841 aa12.07□□□□□ -0.48
HMGN1-220ENST00000492280 LAMP1P11279 417 aa12.07□□□□□ -0.48
HMGN1-220ENST00000492280 CEBPBP17676 345 aa12.07□□□□□ -0.48
HMGN1-220ENST00000492280 AMD1P17707 334 aa12.07□□□□□ -0.48
HMGN1-220ENST00000492280 POLR2EP19388 210 aaKnown RBP12.07□□□□□ -0.48
HMGN1-220ENST00000492280 CYP2A7P20853 494 aa12.07□□□□□ -0.48
HMGN1-220ENST00000492280 CTNNB1P35222 781 aa12.07□□□□□ -0.48
HMGN1-220ENST00000492280 PPM1AP35813 382 aa12.07□□□□□ -0.48
HMGN1-220ENST00000492280 VIPR2P41587 438 aa12.07□□□□□ -0.48
HMGN1-220ENST00000492280 CDK9P50750 372 aaKnown RBP12.07□□□□□ -0.48
HMGN1-220ENST00000492280 DYNC1I2Q13409 638 aaKnown RBP12.07□□□□□ -0.48
HMGN1-220ENST00000492280 DOC2AQ14183 400 aa12.07□□□□□ -0.48
HMGN1-220ENST00000492280 KCTD21Q4G0X4 260 aa12.07□□□□□ -0.48
HMGN1-220ENST00000492280 IER5LQ5T953 404 aa12.07□□□□□ -0.48
HMGN1-220ENST00000492280 CCDC149Q6ZUS6 474 aa12.07□□□□□ -0.48
HMGN1-220ENST00000492280 USP51Q70EK9 711 aa12.07□□□□□ -0.48
HMGN1-220ENST00000492280 LRRC70Q7Z2Q7 622 aa12.07□□□□□ -0.48
HMGN1-220ENST00000492280 GPR180Q86V85 440 aa12.07□□□□□ -0.48
HMGN1-220ENST00000492280 GOLM1Q8NBJ4 401 aa12.07□□□□□ -0.48
HMGN1-220ENST00000492280 MCOLN3Q8TDD5 553 aa12.07□□□□□ -0.48
HMGN1-220ENST00000492280 MRGPRX3Q96LB0 322 aa12.07□□□□□ -0.48
HMGN1-220ENST00000492280 PANX1Q96RD7 426 aa12.07□□□□□ -0.48
HMGN1-220ENST00000492280 MBOAT4Q96T53 435 aa12.07□□□□□ -0.48
HMGN1-220ENST00000492280 HEPHQ9BQS7 1158 aa12.07□□□□□ -0.48
HMGN1-220ENST00000492280 FANCEQ9HB96 536 aa12.07□□□□□ -0.48
HMGN1-220ENST00000492280 ZNF510Q9Y2H8 683 aa12.07□□□□□ -0.48
HMGN1-220ENST00000492280 ZNF451Q9Y4E5 1061 aa12.07□□□□□ -0.48
HMGN1-220ENST00000492280 TULP3O75386 442 aa12.07□□□□□ -0.48
HMGN1-220ENST00000492280 BMP10O95393 424 aa12.07□□□□□ -0.48
HMGN1-220ENST00000492280 NPPAP01160 153 aa12.07□□□□□ -0.48
HMGN1-220ENST00000492280 COX7A2P14406 83 aa12.07□□□□□ -0.48
HMGN1-220ENST00000492280 GALK1P51570 392 aa12.07□□□□□ -0.48
HMGN1-220ENST00000492280 CLDN8P56748 225 aa12.07□□□□□ -0.48
HMGN1-220ENST00000492280 FGD3Q5JSP0 725 aa12.07□□□□□ -0.48
HMGN1-220ENST00000492280 ANGPTL8Q6UXH0 198 aa12.07□□□□□ -0.48
HMGN1-220ENST00000492280 CEP68Q76N32 757 aa12.07□□□□□ -0.48
HMGN1-220ENST00000492280 PARS2Q7L3T8 475 aaKnown RBP12.07□□□□□ -0.48
HMGN1-220ENST00000492280 R3HCC1LQ7Z5L2 792 aaKnown RBP12.07□□□□□ -0.48
HMGN1-220ENST00000492280 TMPRSS11BQ86T26 416 aa12.07□□□□□ -0.48
HMGN1-220ENST00000492280 THOC6Q86W42 341 aaKnown RBP12.07□□□□□ -0.48
HMGN1-220ENST00000492280 BPIFB6Q8NFQ5 453 aa12.07□□□□□ -0.48
HMGN1-220ENST00000492280 TNIP2Q8NFZ5 429 aa12.07□□□□□ -0.48
HMGN1-220ENST00000492280 CNIH3Q8TBE1 160 aa12.07□□□□□ -0.48
HMGN1-220ENST00000492280 POF1BQ8WVV4 589 aa12.07□□□□□ -0.48
HMGN1-220ENST00000492280 NXPE3Q969Y0 559 aa12.07□□□□□ -0.48
HMGN1-220ENST00000492280 SLC29A3Q9BZD2 475 aa12.07□□□□□ -0.48
HMGN1-220ENST00000492280 DYTNA2CJ06 578 aa12.06□□□□□ -0.48
HMGN1-220ENST00000492280 XPNPEP2O43895 674 aa12.06□□□□□ -0.48
HMGN1-220ENST00000492280 TIMP1P01033 207 aa12.06□□□□□ -0.48
HMGN1-220ENST00000492280 ELFN1P0C7U0 828 aa12.06□□□□□ -0.48
HMGN1-220ENST00000492280 MYOGP15173 224 aa12.06□□□□□ -0.48
HMGN1-220ENST00000492280 TNFRSF1BP20333 461 aa12.06□□□□□ -0.48
HMGN1-220ENST00000492280 FSHRP23945 695 aa12.06□□□□□ -0.48
HMGN1-220ENST00000492280 VIPR1P32241 457 aa12.06□□□□□ -0.48
HMGN1-220ENST00000492280 KIR3DL1P43629 444 aa12.06□□□□□ -0.48
HMGN1-220ENST00000492280 STARD3Q14849 445 aa12.06□□□□□ -0.48
HMGN1-220ENST00000492280 CATSPEREQ5SY80 951 aa12.06□□□□□ -0.48
HMGN1-220ENST00000492280 TMEM220Q6QAJ8 160 aa12.06□□□□□ -0.48
HMGN1-220ENST00000492280 C1orf52Q8N6N3 182 aaKnown RBP12.06□□□□□ -0.48
HMGN1-220ENST00000492280 VN1R2Q8NFZ6 395 aa12.06□□□□□ -0.48
HMGN1-220ENST00000492280 AP2M1Q96CW1 435 aa12.06□□□□□ -0.48
HMGN1-220ENST00000492280 DGCR6LQ9BY27 220 aa12.06□□□□□ -0.48
HMGN1-220ENST00000492280 CPEB1Q9BZB8 566 aaKnown RBP12.06□□□□□ -0.48
HMGN1-220ENST00000492280 THG1LQ9NWX6 298 aaKnown RBP12.06□□□□□ -0.48
HMGN1-220ENST00000492280 GULP1Q9UBP9 304 aa12.06□□□□□ -0.48
HMGN1-220ENST00000492280 PLAGL1Q9UM63 463 aa12.06□□□□□ -0.48
HMGN1-220ENST00000492280 PCYT1BQ9Y5K3 369 aaPredicted RBP12.06□□□□□ -0.48
HMGN1-220ENST00000492280 GON4LQ3T8J9 2241 aa12.06□□□□□ -0.48
HMGN1-220ENST00000492280 PLXNA2O75051 1894 aa12.06□□□□□ -0.48
HMGN1-220ENST00000492280 OTOL1A6NHN0 477 aaPredicted RBP12.06□□□□□ -0.48
HMGN1-220ENST00000492280 C16orf96A6NNT2 1141 aa12.06□□□□□ -0.48
HMGN1-220ENST00000492280 PTGES3LE9PB15 166 aa12.06□□□□□ -0.48
HMGN1-220ENST00000492280 GFYI3L273 518 aa12.06□□□□□ -0.48
HMGN1-220ENST00000492280 FPGTO14772 594 aa12.06□□□□□ -0.48
HMGN1-220ENST00000492280 MAGEB3O15480 346 aa12.06□□□□□ -0.48
HMGN1-220ENST00000492280 ZBTB11O95625 1053 aaPredicted RBP12.06□□□□□ -0.48
HMGN1-220ENST00000492280 OPN1SWP03999 348 aa12.06□□□□□ -0.48
HMGN1-220ENST00000492280 C8GP07360 202 aa12.06□□□□□ -0.48
HMGN1-220ENST00000492280 CBSLP0DN79 551 aa12.06□□□□□ -0.48
HMGN1-220ENST00000492280 SYN1P17600 705 aa12.06□□□□□ -0.48
HMGN1-220ENST00000492280 MATN1P21941 496 aa12.06□□□□□ -0.48
HMGN1-220ENST00000492280 EPHA2P29317 976 aa12.06□□□□□ -0.48
HMGN1-220ENST00000492280 CBSP35520 551 aa12.06□□□□□ -0.48
HMGN1-220ENST00000492280 DCTP40126 519 aa12.06□□□□□ -0.48
HMGN1-220ENST00000492280 GZMMP51124 257 aa12.06□□□□□ -0.48
HMGN1-220ENST00000492280 SIM2Q14190 667 aaPredicted RBP12.06□□□□□ -0.48
HMGN1-220ENST00000492280 GBX1Q14549 363 aa12.06□□□□□ -0.48
HMGN1-220ENST00000492280 CYP27C1Q4G0S4 372 aa12.06□□□□□ -0.48
HMGN1-220ENST00000492280 AGTRAPQ6RW13 159 aa12.06□□□□□ -0.48
HMGN1-220ENST00000492280 CRTC3Q6UUV7 619 aa12.06□□□□□ -0.48
HMGN1-220ENST00000492280 TMEM132CQ8N3T6 1108 aa12.06□□□□□ -0.48
HMGN1-220ENST00000492280 GLB1L3Q8NCI6 653 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms