RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 GRIA3P42263 894 aa11.15□□□□□ -0.62
CACNA1C-228ENST00000492150 TNFSF10P50591 281 aa11.15□□□□□ -0.62
CACNA1C-228ENST00000492150 CACNG1Q06432 222 aa11.15□□□□□ -0.62
CACNA1C-228ENST00000492150 YOD1Q5VVQ6 348 aaPredicted RBP11.15□□□□□ -0.62
CACNA1C-228ENST00000492150 PODNL1Q6PEZ8 512 aa11.15□□□□□ -0.62
CACNA1C-228ENST00000492150 PAMR1Q6UXH9 720 aa11.15□□□□□ -0.62
CACNA1C-228ENST00000492150 KLHDC8BQ8IXV7 354 aa11.15□□□□□ -0.62
CACNA1C-228ENST00000492150 RCOR2Q8IZ40 523 aa11.15□□□□□ -0.62
CACNA1C-228ENST00000492150 METTL27Q8N6F8 245 aaPredicted RBP11.15□□□□□ -0.62
CACNA1C-228ENST00000492150 DENND1AQ8TEH3 1009 aa11.15□□□□□ -0.62
CACNA1C-228ENST00000492150 PSMF1Q92530 271 aa11.15□□□□□ -0.62
CACNA1C-228ENST00000492150 ELMO1Q92556 727 aa11.15□□□□□ -0.62
CACNA1C-228ENST00000492150 SDCCAG3Q96C92 435 aa11.15□□□□□ -0.62
CACNA1C-228ENST00000492150 CDKN2AIPNLQ96HQ2 116 aa11.15□□□□□ -0.62
CACNA1C-228ENST00000492150 MAGED4Q96JG8 741 aa11.15□□□□□ -0.62
CACNA1C-228ENST00000492150 MENTQ9BUN1 341 aa11.15□□□□□ -0.62
CACNA1C-228ENST00000492150 ZNF160Q9HCG1 818 aa11.15□□□□□ -0.62
CACNA1C-228ENST00000492150 PLA2G3Q9NZ20 509 aa11.15□□□□□ -0.62
CACNA1C-228ENST00000492150 COQ3Q9NZJ6 369 aa11.15□□□□□ -0.62
CACNA1C-228ENST00000492150 NXT1Q9UKK6 140 aaKnown RBP11.15□□□□□ -0.62
CACNA1C-228ENST00000492150 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.15□□□□□ -0.62
CACNA1C-228ENST00000492150 ZANQ9Y493 2812 aa11.14□□□□□ -0.63
CACNA1C-228ENST00000492150 TRAV17A0A0B4J275 112 aa11.14□□□□□ -0.63
CACNA1C-228ENST00000492150 FITM1A5D6W6 292 aa11.14□□□□□ -0.63
CACNA1C-228ENST00000492150 APOC4-APOC2K7ER74 178 aa11.14□□□□□ -0.63
CACNA1C-228ENST00000492150 MED26O95402 600 aa11.14□□□□□ -0.63
CACNA1C-228ENST00000492150 APOC2P02655 101 aa11.14□□□□□ -0.63
CACNA1C-228ENST00000492150 NSG1P42857 185 aa11.14□□□□□ -0.63
CACNA1C-228ENST00000492150 RAB28P51157 221 aa11.14□□□□□ -0.63
CACNA1C-228ENST00000492150 TPM4P67936 248 aa11.14□□□□□ -0.63
CACNA1C-228ENST00000492150 ARG2P78540 354 aa11.14□□□□□ -0.63
CACNA1C-228ENST00000492150 KLC1Q07866 573 aa11.14□□□□□ -0.63
CACNA1C-228ENST00000492150 MYBPHQ13203 477 aa11.14□□□□□ -0.63
CACNA1C-228ENST00000492150 GRB7Q14451 532 aa11.14□□□□□ -0.63
CACNA1C-228ENST00000492150 PRPSAP1Q14558 356 aa11.14□□□□□ -0.63
CACNA1C-228ENST00000492150 GRM7Q14831 915 aa11.14□□□□□ -0.63
CACNA1C-228ENST00000492150 SHEQ5VZ18 495 aa11.14□□□□□ -0.63
CACNA1C-228ENST00000492150 ATG9BQ674R7 924 aa11.14□□□□□ -0.63
CACNA1C-228ENST00000492150 FIGLAQ6QHK4 219 aa11.14□□□□□ -0.63
CACNA1C-228ENST00000492150 TMTC1Q8IUR5 882 aa11.14□□□□□ -0.63
CACNA1C-228ENST00000492150 CCDC50Q8IVM0 306 aa11.14□□□□□ -0.63
CACNA1C-228ENST00000492150 KBTBD2Q8IY47 623 aa11.14□□□□□ -0.63
CACNA1C-228ENST00000492150 C2orf73Q8N5S3 287 aaPredicted RBP11.14□□□□□ -0.63
CACNA1C-228ENST00000492150 CCDC110Q8TBZ0 833 aa11.14□□□□□ -0.63
CACNA1C-228ENST00000492150 THAP3Q8WTV1 239 aaPredicted RBP11.14□□□□□ -0.63
CACNA1C-228ENST00000492150 C8orf44Q96CB5 159 aa11.14□□□□□ -0.63
CACNA1C-228ENST00000492150 VPS50Q96JG6 964 aa11.14□□□□□ -0.63
CACNA1C-228ENST00000492150 DMRTA2Q96SC8 542 aa11.14□□□□□ -0.63
CACNA1C-228ENST00000492150 CRB3Q9BUF7 120 aa11.14□□□□□ -0.63
CACNA1C-228ENST00000492150 NHEJ1Q9H9Q4 299 aaPredicted RBP11.14□□□□□ -0.63
CACNA1C-228ENST00000492150 LUC7LQ9NQ29 371 aaKnown RBP11.14□□□□□ -0.63
CACNA1C-228ENST00000492150 FEZ2Q9UHY8 353 aaPredicted RBP11.14□□□□□ -0.63
CACNA1C-228ENST00000492150 MAU2Q9Y6X3 613 aa11.14□□□□□ -0.63
CACNA1C-228ENST00000492150 E9PLN8 166 aa11.13□□□□□ -0.63
CACNA1C-228ENST00000492150 QSOX1O00391 747 aa11.13□□□□□ -0.63
CACNA1C-228ENST00000492150 CTSVO60911 334 aa11.13□□□□□ -0.63
CACNA1C-228ENST00000492150 USP1O94782 785 aa11.13□□□□□ -0.63
CACNA1C-228ENST00000492150 FTH1P02794 183 aa11.13□□□□□ -0.63
CACNA1C-228ENST00000492150 PRR35P0CG20 571 aa11.13□□□□□ -0.63
CACNA1C-228ENST00000492150 ACPPP15309 386 aa11.13□□□□□ -0.63
CACNA1C-228ENST00000492150 TPH1P17752 444 aa11.13□□□□□ -0.63
CACNA1C-228ENST00000492150 PSMA3P25788 255 aa11.13□□□□□ -0.63
CACNA1C-228ENST00000492150 PLOD1Q02809 727 aaPredicted RBP11.13□□□□□ -0.63
CACNA1C-228ENST00000492150 ITIH4Q14624 930 aa11.13□□□□□ -0.63
CACNA1C-228ENST00000492150 ZC3H12BQ5HYM0 836 aaKnown RBP11.13□□□□□ -0.63
CACNA1C-228ENST00000492150 TCTE1Q5JU00 501 aa11.13□□□□□ -0.63
CACNA1C-228ENST00000492150 CAVIN1Q6NZI2 390 aaKnown RBP11.13□□□□□ -0.63
CACNA1C-228ENST00000492150 PACS1Q6VY07 963 aa11.13□□□□□ -0.63
CACNA1C-228ENST00000492150 TAX1BP1Q86VP1 789 aa11.13□□□□□ -0.63
CACNA1C-228ENST00000492150 SPPL2CQ8IUH8 684 aa11.13□□□□□ -0.63
CACNA1C-228ENST00000492150 PRSS58Q8IYP2 241 aa11.13□□□□□ -0.63
CACNA1C-228ENST00000492150 EID3Q8N140 333 aa11.13□□□□□ -0.63
CACNA1C-228ENST00000492150 TTC29Q8NA56 475 aaPredicted RBP11.13□□□□□ -0.63
CACNA1C-228ENST00000492150 ACTL9Q8TC94 416 aa11.13□□□□□ -0.63
CACNA1C-228ENST00000492150 STT3BQ8TCJ2 826 aa11.13□□□□□ -0.63
CACNA1C-228ENST00000492150 BRIX1Q8TDN6 353 aaKnown RBP11.13□□□□□ -0.63
CACNA1C-228ENST00000492150 KRT35Q92764 455 aa11.13□□□□□ -0.63
CACNA1C-228ENST00000492150 HAS2Q92819 552 aa11.13□□□□□ -0.63
CACNA1C-228ENST00000492150 CCDC42Q96M95 316 aa11.13□□□□□ -0.63
CACNA1C-228ENST00000492150 SPATA13Q96N96 652 aa11.13□□□□□ -0.63
CACNA1C-228ENST00000492150 IL17FQ96PD4 163 aa11.13□□□□□ -0.63
CACNA1C-228ENST00000492150 VKORC1Q9BQB6 163 aa11.13□□□□□ -0.63
CACNA1C-228ENST00000492150 SELENOSQ9BQE4 189 aa11.13□□□□□ -0.63
CACNA1C-228ENST00000492150 IL1RAPL1Q9NZN1 696 aa11.13□□□□□ -0.63
CACNA1C-228ENST00000492150 PTGFRNQ9P2B2 879 aa11.13□□□□□ -0.63
CACNA1C-228ENST00000492150 IMPACTQ9P2X3 320 aa11.13□□□□□ -0.63
CACNA1C-228ENST00000492150 CIDEBQ9UHD4 219 aa11.13□□□□□ -0.63
CACNA1C-228ENST00000492150 INTUQ9ULD6 942 aa11.13□□□□□ -0.63
CACNA1C-228ENST00000492150 HRNRQ86YZ3 2850 aaPredicted RBP11.13□□□□□ -0.63
CACNA1C-228ENST00000492150 DYTNA2CJ06 578 aa11.12□□□□□ -0.63
CACNA1C-228ENST00000492150 OR51F1A6NGY5 319 aa11.12□□□□□ -0.63
CACNA1C-228ENST00000492150 MAP2K7O14733 419 aa11.12□□□□□ -0.63
CACNA1C-228ENST00000492150 KDM1AO60341 852 aa11.12□□□□□ -0.63
CACNA1C-228ENST00000492150 OR1I1O60431 355 aa11.12□□□□□ -0.63
CACNA1C-228ENST00000492150 WISP2O76076 250 aa11.12□□□□□ -0.63
CACNA1C-228ENST00000492150 RASAL1O95294 804 aa11.12□□□□□ -0.63
CACNA1C-228ENST00000492150 S1PR4O95977 384 aa11.12□□□□□ -0.63
CACNA1C-228ENST00000492150 F10P00742 488 aa11.12□□□□□ -0.63
CACNA1C-228ENST00000492150 RAF1P04049 648 aa11.12□□□□□ -0.63
CACNA1C-228ENST00000492150 ZGLP1P0C6A0 271 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms