RNA–Protein interactions for RNA: ENST00000491607.5

SMIM4-205, Transcript of small integral membrane protein 4, humanhuman

TSL 3

Gene SMIM4, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-205ENST00000491607 TTC27Q6P3X3 843 aa17.57■□□□□ 0.4
SMIM4-205ENST00000491607 SUSD1Q6UWL2 747 aa17.57■□□□□ 0.4
SMIM4-205ENST00000491607 RNF44Q7L0R7 432 aa17.57■□□□□ 0.4
SMIM4-205ENST00000491607 CILP2Q8IUL8 1156 aa17.57■□□□□ 0.4
SMIM4-205ENST00000491607 OR4N4Q8N0Y3 316 aa17.57■□□□□ 0.4
SMIM4-205ENST00000491607 ZNF669Q96BR6 464 aaPredicted RBP17.57■□□□□ 0.4
SMIM4-205ENST00000491607 ZFYVE21Q9BQ24 234 aa17.57■□□□□ 0.4
SMIM4-205ENST00000491607 DPH7Q9BTV6 452 aa17.57■□□□□ 0.4
SMIM4-205ENST00000491607 FAM114A2Q9NRY5 505 aa17.57■□□□□ 0.4
SMIM4-205ENST00000491607 SEMA3GQ9NS98 782 aa17.57■□□□□ 0.4
SMIM4-205ENST00000491607 ASF1BQ9NVP2 202 aa17.57■□□□□ 0.4
SMIM4-205ENST00000491607 STOX2Q9P2F5 926 aaPredicted RBP17.57■□□□□ 0.4
SMIM4-205ENST00000491607 VPS9D1Q9Y2B5 631 aa17.57■□□□□ 0.4
SMIM4-205ENST00000491607 KLK4Q9Y5K2 254 aa17.57■□□□□ 0.4
SMIM4-205ENST00000491607 HS3ST3B1Q9Y662 390 aa17.57■□□□□ 0.4
SMIM4-205ENST00000491607 SNRNP200O75643 2136 aaKnown RBP17.57■□□□□ 0.4
SMIM4-205ENST00000491607 MAST4O15021 2626 aa17.56■□□□□ 0.4
SMIM4-205ENST00000491607 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.56■□□□□ 0.4
SMIM4-205ENST00000491607 GOLGA8MH3BSY2 632 aa17.56■□□□□ 0.4
SMIM4-205ENST00000491607 USP1O94782 785 aa17.56■□□□□ 0.4
SMIM4-205ENST00000491607 MED26O95402 600 aa17.56■□□□□ 0.4
SMIM4-205ENST00000491607 F7P08709 466 aaPredicted RBP17.56■□□□□ 0.4
SMIM4-205ENST00000491607 GLRBP48167 497 aa17.56■□□□□ 0.4
SMIM4-205ENST00000491607 THOC5Q13769 683 aaKnown RBP17.56■□□□□ 0.4
SMIM4-205ENST00000491607 TUBB8Q3ZCM7 444 aa17.56■□□□□ 0.4
SMIM4-205ENST00000491607 ZNF470Q6ECI4 717 aa17.56■□□□□ 0.4
SMIM4-205ENST00000491607 KIRREL2Q6UWL6 708 aa17.56■□□□□ 0.4
SMIM4-205ENST00000491607 CENPUQ71F23 418 aa17.56■□□□□ 0.4
SMIM4-205ENST00000491607 CAND1Q86VP6 1230 aaKnown RBP17.56■□□□□ 0.4
SMIM4-205ENST00000491607 PARP9Q8IXQ6 854 aa17.56■□□□□ 0.4
SMIM4-205ENST00000491607 PRSS58Q8IYP2 241 aa17.56■□□□□ 0.4
SMIM4-205ENST00000491607 SMPDL3AQ92484 453 aa17.56■□□□□ 0.4
SMIM4-205ENST00000491607 MAGOHBQ96A72 148 aaKnown RBP17.56■□□□□ 0.4
SMIM4-205ENST00000491607 VPS50Q96JG6 964 aa17.56■□□□□ 0.4
SMIM4-205ENST00000491607 CABS1Q96KC9 395 aa17.56■□□□□ 0.4
SMIM4-205ENST00000491607 CRB3Q9BUF7 120 aa17.56■□□□□ 0.4
SMIM4-205ENST00000491607 MRPS30Q9NP92 439 aaKnown RBP17.56■□□□□ 0.4
SMIM4-205ENST00000491607 ENAMQ9NRM1 1142 aa17.56■□□□□ 0.4
SMIM4-205ENST00000491607 ABCF3Q9NUQ8 709 aa17.56■□□□□ 0.4
SMIM4-205ENST00000491607 INTS10Q9NVR2 710 aaKnown RBP17.56■□□□□ 0.4
SMIM4-205ENST00000491607 PPP2R2CQ9Y2T4 447 aa17.56■□□□□ 0.4
SMIM4-205ENST00000491607 LRRK2Q5S007 2527 aa17.55■□□□□ 0.4
SMIM4-205ENST00000491607 OR2A25A4D2G3 310 aa17.55■□□□□ 0.4
SMIM4-205ENST00000491607 MYO1CO00159 1063 aa17.55■□□□□ 0.4
SMIM4-205ENST00000491607 NRDCO43847 1150 aa17.55■□□□□ 0.4
SMIM4-205ENST00000491607 VPS26AO75436 327 aa17.55■□□□□ 0.4
SMIM4-205ENST00000491607 PSIP1O75475 530 aaKnown RBP17.55■□□□□ 0.4
SMIM4-205ENST00000491607 CATP04040 527 aaKnown RBP17.55■□□□□ 0.4
SMIM4-205ENST00000491607 MAGEA6P43360 314 aa17.55■□□□□ 0.4
SMIM4-205ENST00000491607 CCZ1BP86790 482 aa17.55■□□□□ 0.4
SMIM4-205ENST00000491607 CCZ1P86791 482 aaPredicted RBP17.55■□□□□ 0.4
SMIM4-205ENST00000491607 OCA2Q04671 838 aa17.55■□□□□ 0.4
SMIM4-205ENST00000491607 HIF1AQ16665 826 aa17.55■□□□□ 0.4
SMIM4-205ENST00000491607 TTLL9Q3SXZ7 439 aa17.55■□□□□ 0.4
SMIM4-205ENST00000491607 C4orf17Q53FE4 359 aa17.55■□□□□ 0.4
SMIM4-205ENST00000491607 AGAP7PQ5VUJ5 663 aa17.55■□□□□ 0.4
SMIM4-205ENST00000491607 PRMT9Q6P2P2 845 aa17.55■□□□□ 0.4
SMIM4-205ENST00000491607 INPP5DQ92835 1189 aa17.55■□□□□ 0.4
SMIM4-205ENST00000491607 MIEF2Q96C03 454 aa17.55■□□□□ 0.4
SMIM4-205ENST00000491607 MS4A14Q96JA4 679 aa17.55■□□□□ 0.4
SMIM4-205ENST00000491607 AGAP4Q96P64 663 aa17.55■□□□□ 0.4
SMIM4-205ENST00000491607 PKP4Q99569 1192 aa17.55■□□□□ 0.4
SMIM4-205ENST00000491607 CCDC68Q9H2F9 335 aa17.55■□□□□ 0.4
SMIM4-205ENST00000491607 FBXO6Q9NRD1 293 aaPredicted RBP17.55■□□□□ 0.4
SMIM4-205ENST00000491607 ZNF282Q9UDV7 671 aaPredicted RBP17.55■□□□□ 0.4
SMIM4-205ENST00000491607 PLEKHB1Q9UF11 243 aaPredicted RBP17.55■□□□□ 0.4
SMIM4-205ENST00000491607 COPG1Q9Y678 874 aaKnown RBP17.55■□□□□ 0.4
SMIM4-205ENST00000491607 FAM237BA0A1B0GVD1 139 aa17.54■□□□□ 0.4
SMIM4-205ENST00000491607 MAGEB16A2A368 324 aa17.54■□□□□ 0.4
SMIM4-205ENST00000491607 SDR42E2A6NKP2 422 aa17.54■□□□□ 0.4
SMIM4-205ENST00000491607 VSTM2BA6NLU5 285 aa17.54■□□□□ 0.4
SMIM4-205ENST00000491607 H0YGG7 62 aa17.54■□□□□ 0.4
SMIM4-205ENST00000491607 SYF2O95926 243 aaKnown RBP17.54■□□□□ 0.4
SMIM4-205ENST00000491607 ERGP11308 486 aa17.54■□□□□ 0.4
SMIM4-205ENST00000491607 FBLP22087 321 aaKnown RBP17.54■□□□□ 0.4
SMIM4-205ENST00000491607 CARSP49589 748 aaKnown RBP17.54■□□□□ 0.4
SMIM4-205ENST00000491607 CLCN7P51798 805 aa17.54■□□□□ 0.4
SMIM4-205ENST00000491607 PNLIPRP1P54315 467 aa17.54■□□□□ 0.4
SMIM4-205ENST00000491607 ARF3P61204 181 aaPredicted RBP17.54■□□□□ 0.4
SMIM4-205ENST00000491607 KLC1Q07866 573 aa17.54■□□□□ 0.4
SMIM4-205ENST00000491607 CTBP1Q13363 440 aa17.54■□□□□ 0.4
SMIM4-205ENST00000491607 CUL1Q13616 776 aa17.54■□□□□ 0.4
SMIM4-205ENST00000491607 MUM1Q2TAK8 710 aa17.54■□□□□ 0.4
SMIM4-205ENST00000491607 ARMC3Q5W041 872 aa17.54■□□□□ 0.4
SMIM4-205ENST00000491607 FBXO42Q6P3S6 717 aa17.54■□□□□ 0.4
SMIM4-205ENST00000491607 Q6ZS92 163 aa17.54■□□□□ 0.4
SMIM4-205ENST00000491607 CUZD1Q86UP6 607 aa17.54■□□□□ 0.4
SMIM4-205ENST00000491607 DENND6AQ8IWF6 608 aa17.54■□□□□ 0.4
SMIM4-205ENST00000491607 REXO1L1PQ8IX06 675 aa17.54■□□□□ 0.4
SMIM4-205ENST00000491607 PPFIBP2Q8ND30 876 aa17.54■□□□□ 0.4
SMIM4-205ENST00000491607 OR11G2Q8NGC1 345 aa17.54■□□□□ 0.4
SMIM4-205ENST00000491607 STT3BQ8TCJ2 826 aa17.54■□□□□ 0.4
SMIM4-205ENST00000491607 THOC3Q96J01 351 aaKnown RBP17.54■□□□□ 0.4
SMIM4-205ENST00000491607 SLC30A3Q99726 388 aa17.54■□□□□ 0.4
SMIM4-205ENST00000491607 WDR77Q9BQA1 342 aaPredicted RBP17.54■□□□□ 0.4
SMIM4-205ENST00000491607 YIPF2Q9BWQ6 316 aa17.54■□□□□ 0.4
SMIM4-205ENST00000491607 XAB2Q9HCS7 855 aaKnown RBP17.54■□□□□ 0.4
SMIM4-205ENST00000491607 CUEDC1Q9NWM3 386 aaPredicted RBP17.54■□□□□ 0.4
SMIM4-205ENST00000491607 TAC3Q9UHF0 121 aa17.54■□□□□ 0.4
SMIM4-205ENST00000491607 CSAG2Q9Y5P2 127 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms