RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 CSNK1G3Q9Y6M4 447 aa13.68□□□□□ -0.22
VPS26A-205ENST00000489656 GOLGA4Q13439 2230 aaKnown RBP13.68□□□□□ -0.22
VPS26A-205ENST00000489656 ATXN2Q99700 1313 aaKnown RBP13.67□□□□□ -0.22
VPS26A-205ENST00000489656 PRAMEF33A0A0G2JMD5 474 aa13.67□□□□□ -0.22
VPS26A-205ENST00000489656 H0YIV9 168 aa13.67□□□□□ -0.22
VPS26A-205ENST00000489656 MANBAO00462 879 aa13.67□□□□□ -0.22
VPS26A-205ENST00000489656 VIPP01282 170 aa13.67□□□□□ -0.22
VPS26A-205ENST00000489656 PRR35P0CG20 571 aa13.67□□□□□ -0.22
VPS26A-205ENST00000489656 EPHA3P29320 983 aa13.67□□□□□ -0.22
VPS26A-205ENST00000489656 FASLGP48023 281 aa13.67□□□□□ -0.22
VPS26A-205ENST00000489656 IRX1P78414 480 aaPredicted RBP13.67□□□□□ -0.22
VPS26A-205ENST00000489656 IFT88Q13099 833 aa13.67□□□□□ -0.22
VPS26A-205ENST00000489656 LAPTM5Q13571 262 aa13.67□□□□□ -0.22
VPS26A-205ENST00000489656 DOC2AQ14183 400 aa13.67□□□□□ -0.22
VPS26A-205ENST00000489656 ZNF423Q2M1K9 1284 aa13.67□□□□□ -0.22
VPS26A-205ENST00000489656 KIF19Q2TAC6 998 aa13.67□□□□□ -0.22
VPS26A-205ENST00000489656 XKR6Q5GH73 641 aa13.67□□□□□ -0.22
VPS26A-205ENST00000489656 C10orf62Q5T681 223 aaPredicted RBP13.67□□□□□ -0.22
VPS26A-205ENST00000489656 LCE2DQ5TA82 110 aaPredicted RBP13.67□□□□□ -0.22
VPS26A-205ENST00000489656 OGFOD3Q6PK18 319 aa13.67□□□□□ -0.22
VPS26A-205ENST00000489656 SUSD1Q6UWL2 747 aa13.67□□□□□ -0.22
VPS26A-205ENST00000489656 TRIM46Q7Z4K8 759 aa13.67□□□□□ -0.22
VPS26A-205ENST00000489656 SLC9B2Q86UD5 537 aa13.67□□□□□ -0.22
VPS26A-205ENST00000489656 MTDHQ86UE4 582 aaKnown RBP13.67□□□□□ -0.22
VPS26A-205ENST00000489656 ALYREFQ86V81 257 aaKnown RBP13.67□□□□□ -0.22
VPS26A-205ENST00000489656 FITM2Q8N6M3 262 aa13.67□□□□□ -0.22
VPS26A-205ENST00000489656 GBP7Q8N8V2 638 aaPredicted RBP13.67□□□□□ -0.22
VPS26A-205ENST00000489656 CEP76Q8TAP6 659 aa13.67□□□□□ -0.22
VPS26A-205ENST00000489656 LMX1AQ8TE12 382 aa13.67□□□□□ -0.22
VPS26A-205ENST00000489656 LCN9Q8WX39 176 aa13.67□□□□□ -0.22
VPS26A-205ENST00000489656 CCT6BQ92526 530 aa13.67□□□□□ -0.22
VPS26A-205ENST00000489656 PTCD3Q96EY7 689 aaKnown RBP13.67□□□□□ -0.22
VPS26A-205ENST00000489656 C3orf30Q96M34 536 aa13.67□□□□□ -0.22
VPS26A-205ENST00000489656 EFCAB11Q9BUY7 163 aa13.67□□□□□ -0.22
VPS26A-205ENST00000489656 UCK1Q9HA47 277 aa13.67□□□□□ -0.22
VPS26A-205ENST00000489656 PELI2Q9HAT8 420 aa13.67□□□□□ -0.22
VPS26A-205ENST00000489656 MRGBPQ9NV56 204 aa13.67□□□□□ -0.22
VPS26A-205ENST00000489656 SNX6Q9UNH7 406 aa13.67□□□□□ -0.22
VPS26A-205ENST00000489656 TRIM33Q9UPN9 1127 aa13.67□□□□□ -0.22
VPS26A-205ENST00000489656 SH2B3Q9UQQ2 575 aa13.67□□□□□ -0.22
VPS26A-205ENST00000489656 TSC22D4Q9Y3Q8 395 aa13.67□□□□□ -0.22
VPS26A-205ENST00000489656 PCDHB11Q9Y5F2 797 aa13.67□□□□□ -0.22
VPS26A-205ENST00000489656 GOLGA8QA0A0J9YX86 632 aa13.66□□□□□ -0.22
VPS26A-205ENST00000489656 GOLGA8OA6NCC3 632 aa13.66□□□□□ -0.22
VPS26A-205ENST00000489656 NPIPB8E9PQR5 432 aa13.66□□□□□ -0.22
VPS26A-205ENST00000489656 GOLGA8NF8WBI6 632 aa13.66□□□□□ -0.22
VPS26A-205ENST00000489656 FCHO1O14526 889 aa13.66□□□□□ -0.22
VPS26A-205ENST00000489656 YY2O15391 372 aa13.66□□□□□ -0.22
VPS26A-205ENST00000489656 ULK1O75385 1050 aa13.66□□□□□ -0.22
VPS26A-205ENST00000489656 C1GALT1C1LP0DN25 315 aa13.66□□□□□ -0.22
VPS26A-205ENST00000489656 CD22P20273 847 aa13.66□□□□□ -0.22
VPS26A-205ENST00000489656 HTR6P50406 440 aa13.66□□□□□ -0.22
VPS26A-205ENST00000489656 ABATP80404 500 aa13.66□□□□□ -0.22
VPS26A-205ENST00000489656 GPR18Q14330 331 aa13.66□□□□□ -0.22
VPS26A-205ENST00000489656 ZRSR2Q15696 482 aaKnown RBP13.66□□□□□ -0.22
VPS26A-205ENST00000489656 CPSF6Q16630 551 aaKnown RBP eCLIP13.66□□□□□ -0.22
VPS26A-205ENST00000489656 DUOXA1Q1HG43 343 aa13.66□□□□□ -0.22
VPS26A-205ENST00000489656 SMU1Q2TAY7 513 aa13.66□□□□□ -0.22
VPS26A-205ENST00000489656 PAGE2BQ5JRK9 111 aa13.66□□□□□ -0.22
VPS26A-205ENST00000489656 TCHHL1Q5QJ38 904 aaPredicted RBP13.66□□□□□ -0.22
VPS26A-205ENST00000489656 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.66□□□□□ -0.22
VPS26A-205ENST00000489656 THEMIS2Q5TEJ8 643 aa13.66□□□□□ -0.22
VPS26A-205ENST00000489656 FAM219BQ5XKK7 198 aa13.66□□□□□ -0.22
VPS26A-205ENST00000489656 FRG2Q64ET8 278 aa13.66□□□□□ -0.22
VPS26A-205ENST00000489656 ICE2Q659A1 982 aa13.66□□□□□ -0.22
VPS26A-205ENST00000489656 OGFOD2Q6N063 350 aa13.66□□□□□ -0.22
VPS26A-205ENST00000489656 IL27RAQ6UWB1 636 aa13.66□□□□□ -0.22
VPS26A-205ENST00000489656 NXPE4Q6UWF7 544 aa13.66□□□□□ -0.22
VPS26A-205ENST00000489656 CHSY3Q70JA7 882 aa13.66□□□□□ -0.22
VPS26A-205ENST00000489656 YTHDF3Q7Z739 585 aaKnown RBP13.66□□□□□ -0.22
VPS26A-205ENST00000489656 TMPRSS11BQ86T26 416 aa13.66□□□□□ -0.22
VPS26A-205ENST00000489656 AMIGO1Q86WK6 493 aa13.66□□□□□ -0.22
VPS26A-205ENST00000489656 C17orf64Q86WR6 236 aa13.66□□□□□ -0.22
VPS26A-205ENST00000489656 DDIASQ8IXT1 998 aa13.66□□□□□ -0.22
VPS26A-205ENST00000489656 LMNTD1Q8N9Z9 388 aa13.66□□□□□ -0.22
VPS26A-205ENST00000489656 ABHD11Q8NFV4 315 aa13.66□□□□□ -0.22
VPS26A-205ENST00000489656 PATE1Q8WXA2 126 aa13.66□□□□□ -0.22
VPS26A-205ENST00000489656 FRG2BQ96QU4 278 aa13.66□□□□□ -0.22
VPS26A-205ENST00000489656 ELF4Q99607 663 aaPredicted RBP13.66□□□□□ -0.22
VPS26A-205ENST00000489656 NRTNQ99748 197 aa13.66□□□□□ -0.22
VPS26A-205ENST00000489656 PITHD1Q9GZP4 211 aaPredicted RBP13.66□□□□□ -0.22
VPS26A-205ENST00000489656 NMUR2Q9GZQ4 415 aa13.66□□□□□ -0.22
VPS26A-205ENST00000489656 ZNF385DQ9H6B1 395 aa13.66□□□□□ -0.22
VPS26A-205ENST00000489656 RIC8BQ9NVN3 520 aa13.66□□□□□ -0.22
VPS26A-205ENST00000489656 TAC3Q9UHF0 121 aa13.66□□□□□ -0.22
VPS26A-205ENST00000489656 ZFP69BQ9UJL9 534 aa13.66□□□□□ -0.22
VPS26A-205ENST00000489656 BTRCQ9Y297 605 aa13.66□□□□□ -0.22
VPS26A-205ENST00000489656 SNX11Q9Y5W9 270 aa13.66□□□□□ -0.22
VPS26A-205ENST00000489656 SLC28A1O00337 649 aa13.65□□□□□ -0.22
VPS26A-205ENST00000489656 FFAR3O14843 346 aa13.65□□□□□ -0.22
VPS26A-205ENST00000489656 SLC22A2O15244 555 aa13.65□□□□□ -0.22
VPS26A-205ENST00000489656 GPR42O15529 346 aa13.65□□□□□ -0.22
VPS26A-205ENST00000489656 NOBOXO60393 691 aa13.65□□□□□ -0.22
VPS26A-205ENST00000489656 DFNA5O60443 496 aa13.65□□□□□ -0.22
VPS26A-205ENST00000489656 CCNDBP1O95273 360 aa13.65□□□□□ -0.22
VPS26A-205ENST00000489656 ANXA6P08133 673 aa13.65□□□□□ -0.22
VPS26A-205ENST00000489656 LINC00032P0C843 101 aa13.65□□□□□ -0.22
VPS26A-205ENST00000489656 HSD3B1P14060 373 aa13.65□□□□□ -0.22
VPS26A-205ENST00000489656 PRPH2P23942 346 aa13.65□□□□□ -0.22
VPS26A-205ENST00000489656 HSD3B2P26439 372 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms