RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 BORAQ6PGQ7 559 aa15.29■□□□□ 0.04
CTDSP1-209ENST00000488627 C3orf62Q6ZUJ4 267 aa15.29■□□□□ 0.04
CTDSP1-209ENST00000488627 ZNF843Q8N446 348 aa15.29■□□□□ 0.04
CTDSP1-209ENST00000488627 MMGT1Q8N4V1 131 aa15.29■□□□□ 0.04
CTDSP1-209ENST00000488627 MCOLN3Q8TDD5 553 aa15.29■□□□□ 0.04
CTDSP1-209ENST00000488627 ZNF592Q92610 1267 aa15.29■□□□□ 0.04
CTDSP1-209ENST00000488627 PDLIM5Q96HC4 596 aaKnown RBP15.29■□□□□ 0.04
CTDSP1-209ENST00000488627 CCDC138Q96M89 665 aa15.29■□□□□ 0.04
CTDSP1-209ENST00000488627 DPH2Q9BQC3 489 aaPredicted RBP15.29■□□□□ 0.04
CTDSP1-209ENST00000488627 DPH7Q9BTV6 452 aa15.29■□□□□ 0.04
CTDSP1-209ENST00000488627 SYNPO2LQ9H987 977 aa15.29■□□□□ 0.04
CTDSP1-209ENST00000488627 PARVBQ9HBI1 364 aa15.29■□□□□ 0.04
CTDSP1-209ENST00000488627 ZDHHC18Q9NUE0 388 aa15.29■□□□□ 0.04
CTDSP1-209ENST00000488627 STOX2Q9P2F5 926 aaPredicted RBP15.29■□□□□ 0.04
CTDSP1-209ENST00000488627 DHCR7Q9UBM7 475 aaKnown RBP15.29■□□□□ 0.04
CTDSP1-209ENST00000488627 TAC3Q9UHF0 121 aa15.29■□□□□ 0.04
CTDSP1-209ENST00000488627 IKZF3Q9UKT9 509 aa15.29■□□□□ 0.04
CTDSP1-209ENST00000488627 LOC105369274A0A096LPK9 316 aa15.28■□□□□ 0.04
CTDSP1-209ENST00000488627 LOC102723532A0A0G2JNH3 316 aa15.28■□□□□ 0.04
CTDSP1-209ENST00000488627 ESYT3A0FGR9 886 aa15.28■□□□□ 0.04
CTDSP1-209ENST00000488627 FITM1A5D6W6 292 aa15.28■□□□□ 0.04
CTDSP1-209ENST00000488627 FAM159BA6NKW6 160 aa15.28■□□□□ 0.04
CTDSP1-209ENST00000488627 ZNF839A8K0R7 811 aa15.28■□□□□ 0.04
CTDSP1-209ENST00000488627 SRPX2O60687 465 aaPredicted RBP15.28■□□□□ 0.04
CTDSP1-209ENST00000488627 TUBB4AP04350 444 aa15.28■□□□□ 0.04
CTDSP1-209ENST00000488627 ITGAXP20702 1163 aa15.28■□□□□ 0.04
CTDSP1-209ENST00000488627 RPA3P35244 121 aaPredicted RBP15.28■□□□□ 0.04
CTDSP1-209ENST00000488627 RPS15P62841 145 aaKnown RBP15.28■□□□□ 0.04
CTDSP1-209ENST00000488627 SP140Q13342 867 aa15.28■□□□□ 0.04
CTDSP1-209ENST00000488627 PDAP1Q13442 181 aaKnown RBP15.28■□□□□ 0.04
CTDSP1-209ENST00000488627 DEFB109BQ30KR1 87 aa15.28■□□□□ 0.04
CTDSP1-209ENST00000488627 C1orf189Q5VU69 101 aa15.28■□□□□ 0.04
CTDSP1-209ENST00000488627 FAM69BQ5VUD6 431 aa15.28■□□□□ 0.04
CTDSP1-209ENST00000488627 ICE2Q659A1 982 aa15.28■□□□□ 0.04
CTDSP1-209ENST00000488627 FRMPD2BQ6IN97 320 aa15.28■□□□□ 0.04
CTDSP1-209ENST00000488627 MBOAT1Q6ZNC8 495 aa15.28■□□□□ 0.04
CTDSP1-209ENST00000488627 RNF44Q7L0R7 432 aa15.28■□□□□ 0.04
CTDSP1-209ENST00000488627 SYVN1Q86TM6 617 aa15.28■□□□□ 0.04
CTDSP1-209ENST00000488627 PAQR7Q86WK9 346 aa15.28■□□□□ 0.04
CTDSP1-209ENST00000488627 OR4N4Q8N0Y3 316 aa15.28■□□□□ 0.04
CTDSP1-209ENST00000488627 MYO1HQ8N1T3 1032 aa15.28■□□□□ 0.04
CTDSP1-209ENST00000488627 ENDOVQ8N8Q3 282 aaKnown RBP15.28■□□□□ 0.04
CTDSP1-209ENST00000488627 NOA1Q8NC60 698 aaKnown RBP15.28■□□□□ 0.04
CTDSP1-209ENST00000488627 PROKR1Q8TCW9 393 aa15.28■□□□□ 0.04
CTDSP1-209ENST00000488627 PLCD4Q9BRC7 762 aa15.28■□□□□ 0.04
CTDSP1-209ENST00000488627 RHOJQ9H4E5 214 aa15.28■□□□□ 0.04
CTDSP1-209ENST00000488627 LRRC4CQ9HCJ2 640 aa15.28■□□□□ 0.04
CTDSP1-209ENST00000488627 MRPS30Q9NP92 439 aaKnown RBP15.28■□□□□ 0.04
CTDSP1-209ENST00000488627 SLC22A11Q9NSA0 550 aa15.28■□□□□ 0.04
CTDSP1-209ENST00000488627 STARD5Q9NSY2 213 aa15.28■□□□□ 0.04
CTDSP1-209ENST00000488627 GEMIN8Q9NWZ8 242 aaKnown RBP15.28■□□□□ 0.04
CTDSP1-209ENST00000488627 SRPK3Q9UPE1 567 aa15.28■□□□□ 0.04
CTDSP1-209ENST00000488627 A0A0J9YVX5 310 aa15.27■□□□□ 0.04
CTDSP1-209ENST00000488627 FAM95CA0A1B0GW59 222 aa15.27■□□□□ 0.04
CTDSP1-209ENST00000488627 EIF4E1BA6NMX2 242 aaKnown RBP15.27■□□□□ 0.04
CTDSP1-209ENST00000488627 KALRNO60229 2985 aa15.27■□□□□ 0.04
CTDSP1-209ENST00000488627 WISP3O95389 354 aaPredicted RBP15.27■□□□□ 0.04
CTDSP1-209ENST00000488627 MED26O95402 600 aa15.27■□□□□ 0.04
CTDSP1-209ENST00000488627 ONECUT2O95948 504 aa15.27■□□□□ 0.04
CTDSP1-209ENST00000488627 GSTA2P09210 222 aa15.27■□□□□ 0.04
CTDSP1-209ENST00000488627 ZNF37AP17032 561 aaPredicted RBP15.27■□□□□ 0.04
CTDSP1-209ENST00000488627 MAGEA4P43358 317 aa15.27■□□□□ 0.04
CTDSP1-209ENST00000488627 ABATP80404 500 aa15.27■□□□□ 0.04
CTDSP1-209ENST00000488627 DCDP81605 110 aaKnown RBP15.27■□□□□ 0.04
CTDSP1-209ENST00000488627 RELAQ04206 551 aa15.27■□□□□ 0.04
CTDSP1-209ENST00000488627 IL10RAQ13651 578 aa15.27■□□□□ 0.04
CTDSP1-209ENST00000488627 NCF4Q15080 339 aa15.27■□□□□ 0.04
CTDSP1-209ENST00000488627 UGT8Q16880 541 aa15.27■□□□□ 0.04
CTDSP1-209ENST00000488627 TCTE1Q5JU00 501 aa15.27■□□□□ 0.04
CTDSP1-209ENST00000488627 C8orf74Q6P047 294 aa15.27■□□□□ 0.04
CTDSP1-209ENST00000488627 CEP97Q8IW35 865 aa15.27■□□□□ 0.04
CTDSP1-209ENST00000488627 ADAMTS17Q8TE56 1095 aa15.27■□□□□ 0.04
CTDSP1-209ENST00000488627 VPS39Q96JC1 886 aa15.27■□□□□ 0.04
CTDSP1-209ENST00000488627 SELENOSQ9BQE4 189 aa15.27■□□□□ 0.04
CTDSP1-209ENST00000488627 ARHGAP9Q9BRR9 750 aa15.27■□□□□ 0.04
CTDSP1-209ENST00000488627 NDC1Q9BTX1 674 aa15.27■□□□□ 0.04
CTDSP1-209ENST00000488627 SLC7A5P2Q9GIP4 190 aa15.27■□□□□ 0.04
CTDSP1-209ENST00000488627 NSMCE4AQ9NXX6 385 aa15.27■□□□□ 0.04
CTDSP1-209ENST00000488627 ANKMY1Q9P2S6 941 aa15.27■□□□□ 0.04
CTDSP1-209ENST00000488627 DMGDHQ9UI17 866 aaKnown RBP15.27■□□□□ 0.04
CTDSP1-209ENST00000488627 TCFL5Q9UL49 500 aa15.27■□□□□ 0.04
CTDSP1-209ENST00000488627 KCNMB2Q9Y691 235 aa15.27■□□□□ 0.04
CTDSP1-209ENST00000488627 CDC14CA4D256 554 aa15.26■□□□□ 0.03
CTDSP1-209ENST00000488627 CNOT3O75175 753 aaKnown RBP15.26■□□□□ 0.03
CTDSP1-209ENST00000488627 KLF7O75840 302 aaPredicted RBP15.26■□□□□ 0.03
CTDSP1-209ENST00000488627 AGXTP21549 392 aa15.26■□□□□ 0.03
CTDSP1-209ENST00000488627 CCR10P46092 362 aa15.26■□□□□ 0.03
CTDSP1-209ENST00000488627 POLE2P56282 527 aa15.26■□□□□ 0.03
CTDSP1-209ENST00000488627 VSX2P58304 361 aaPredicted RBP15.26■□□□□ 0.03
CTDSP1-209ENST00000488627 TSTA3Q13630 321 aaPredicted RBP15.26■□□□□ 0.03
CTDSP1-209ENST00000488627 ZNF460Q14592 562 aa15.26■□□□□ 0.03
CTDSP1-209ENST00000488627 GRM7Q14831 915 aa15.26■□□□□ 0.03
CTDSP1-209ENST00000488627 NAA25Q14CX7 972 aa15.26■□□□□ 0.03
CTDSP1-209ENST00000488627 NKAIN1Q4KMZ8 207 aa15.26■□□□□ 0.03
CTDSP1-209ENST00000488627 WASHC2DQ5SRD0 308 aa15.26■□□□□ 0.03
CTDSP1-209ENST00000488627 AGTRAPQ6RW13 159 aa15.26■□□□□ 0.03
CTDSP1-209ENST00000488627 ANKRD49Q8WVL7 239 aa15.26■□□□□ 0.03
CTDSP1-209ENST00000488627 APOBEC4Q8WW27 367 aaKnown RBP15.26■□□□□ 0.03
CTDSP1-209ENST00000488627 OR2A5Q96R48 311 aa15.26■□□□□ 0.03
CTDSP1-209ENST00000488627 ZFYVE21Q9BQ24 234 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms