RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 CCZ1P86791 482 aaPredicted RBP11.9□□□□□ -0.5
SREBF1-215ENST00000487401 GBX1Q14549 363 aa11.9□□□□□ -0.5
SREBF1-215ENST00000487401 ARHGAP19Q14CB8 494 aa11.9□□□□□ -0.5
SREBF1-215ENST00000487401 PRAMEF13Q5VWM6 474 aa11.9□□□□□ -0.5
SREBF1-215ENST00000487401 ZNF470Q6ECI4 717 aa11.9□□□□□ -0.5
SREBF1-215ENST00000487401 FRMPD2BQ6IN97 320 aa11.9□□□□□ -0.5
SREBF1-215ENST00000487401 PRMT9Q6P2P2 845 aa11.9□□□□□ -0.5
SREBF1-215ENST00000487401 FBXO42Q6P3S6 717 aa11.9□□□□□ -0.5
SREBF1-215ENST00000487401 IGFL3Q6UXB1 125 aa11.9□□□□□ -0.5
SREBF1-215ENST00000487401 CENPUQ71F23 418 aa11.9□□□□□ -0.5
SREBF1-215ENST00000487401 COX15Q7KZN9 410 aa11.9□□□□□ -0.5
SREBF1-215ENST00000487401 TMEM151BQ8IW70 566 aa11.9□□□□□ -0.5
SREBF1-215ENST00000487401 CISD2Q8N5K1 135 aaKnown RBP11.9□□□□□ -0.5
SREBF1-215ENST00000487401 MS4A14Q96JA4 679 aa11.9□□□□□ -0.5
SREBF1-215ENST00000487401 PSMG3-AS1Q96PY0 264 aa11.9□□□□□ -0.5
SREBF1-215ENST00000487401 PKP4Q99569 1192 aa11.9□□□□□ -0.5
SREBF1-215ENST00000487401 COL12A1Q99715 3063 aa11.9□□□□□ -0.5
SREBF1-215ENST00000487401 ZFYVE21Q9BQ24 234 aa11.9□□□□□ -0.5
SREBF1-215ENST00000487401 DPH7Q9BTV6 452 aa11.9□□□□□ -0.5
SREBF1-215ENST00000487401 SLC6A20Q9NP91 592 aa11.9□□□□□ -0.5
SREBF1-215ENST00000487401 MRPS30Q9NP92 439 aaKnown RBP11.9□□□□□ -0.5
SREBF1-215ENST00000487401 SEMA3GQ9NS98 782 aa11.9□□□□□ -0.5
SREBF1-215ENST00000487401 KLHL42Q9P2K6 505 aa11.9□□□□□ -0.5
SREBF1-215ENST00000487401 CTSFQ9UBX1 484 aa11.9□□□□□ -0.5
SREBF1-215ENST00000487401 MAD1L1Q9Y6D9 718 aa11.9□□□□□ -0.5
SREBF1-215ENST00000487401 RELNP78509 3460 aa11.9□□□□□ -0.51
SREBF1-215ENST00000487401 ZNF106Q9H2Y7 1883 aaKnown RBP11.89□□□□□ -0.51
SREBF1-215ENST00000487401 LOC105369274A0A096LPK9 316 aa11.89□□□□□ -0.51
SREBF1-215ENST00000487401 LOC102723532A0A0G2JNH3 316 aa11.89□□□□□ -0.51
SREBF1-215ENST00000487401 OR2A25A4D2G3 310 aa11.89□□□□□ -0.51
SREBF1-215ENST00000487401 TCP11X1B4DZS4 312 aa11.89□□□□□ -0.51
SREBF1-215ENST00000487401 MYO1CO00159 1063 aa11.89□□□□□ -0.51
SREBF1-215ENST00000487401 SOCS6O14544 535 aa11.89□□□□□ -0.51
SREBF1-215ENST00000487401 PHF2O75151 1096 aa11.89□□□□□ -0.51
SREBF1-215ENST00000487401 PSIP1O75475 530 aaKnown RBP11.89□□□□□ -0.51
SREBF1-215ENST00000487401 SYF2O95926 243 aaKnown RBP11.89□□□□□ -0.51
SREBF1-215ENST00000487401 CLCN7P51798 805 aa11.89□□□□□ -0.51
SREBF1-215ENST00000487401 PNLIPRP1P54315 467 aa11.89□□□□□ -0.51
SREBF1-215ENST00000487401 MUM1Q2TAK8 710 aa11.89□□□□□ -0.51
SREBF1-215ENST00000487401 TUBB8Q3ZCM7 444 aa11.89□□□□□ -0.51
SREBF1-215ENST00000487401 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.89□□□□□ -0.51
SREBF1-215ENST00000487401 AGAP7PQ5VUJ5 663 aa11.89□□□□□ -0.51
SREBF1-215ENST00000487401 CCDC137Q6PK04 289 aaKnown RBP11.89□□□□□ -0.51
SREBF1-215ENST00000487401 SUSD1Q6UWL2 747 aa11.89□□□□□ -0.51
SREBF1-215ENST00000487401 KIRREL2Q6UWL6 708 aa11.89□□□□□ -0.51
SREBF1-215ENST00000487401 NEK10Q6ZWH5 1172 aa11.89□□□□□ -0.51
SREBF1-215ENST00000487401 RNF44Q7L0R7 432 aa11.89□□□□□ -0.51
SREBF1-215ENST00000487401 REXO1L1PQ8IX06 675 aa11.89□□□□□ -0.51
SREBF1-215ENST00000487401 PRSS58Q8IYP2 241 aa11.89□□□□□ -0.51
SREBF1-215ENST00000487401 OR4N4Q8N0Y3 316 aa11.89□□□□□ -0.51
SREBF1-215ENST00000487401 RASGEF1CQ8N431 466 aa11.89□□□□□ -0.51
SREBF1-215ENST00000487401 INPP5DQ92835 1189 aa11.89□□□□□ -0.51
SREBF1-215ENST00000487401 MIEF2Q96C03 454 aa11.89□□□□□ -0.51
SREBF1-215ENST00000487401 SNRNP40Q96DI7 357 aaKnown RBP11.89□□□□□ -0.51
SREBF1-215ENST00000487401 C19orf60Q96EN9 201 aa11.89□□□□□ -0.51
SREBF1-215ENST00000487401 CABS1Q96KC9 395 aa11.89□□□□□ -0.51
SREBF1-215ENST00000487401 SERPINB12Q96P63 405 aa11.89□□□□□ -0.51
SREBF1-215ENST00000487401 AGAP4Q96P64 663 aa11.89□□□□□ -0.51
SREBF1-215ENST00000487401 SPSB2Q99619 263 aa11.89□□□□□ -0.51
SREBF1-215ENST00000487401 PLCD4Q9BRC7 762 aa11.89□□□□□ -0.51
SREBF1-215ENST00000487401 TRIM56Q9BRZ2 755 aaKnown RBP11.89□□□□□ -0.51
SREBF1-215ENST00000487401 CRB3Q9BUF7 120 aa11.89□□□□□ -0.51
SREBF1-215ENST00000487401 YIPF2Q9BWQ6 316 aa11.89□□□□□ -0.51
SREBF1-215ENST00000487401 FBXO6Q9NRD1 293 aaPredicted RBP11.89□□□□□ -0.51
SREBF1-215ENST00000487401 C20orf96Q9NUD7 363 aaPredicted RBP11.89□□□□□ -0.51
SREBF1-215ENST00000487401 STOX2Q9P2F5 926 aaPredicted RBP11.89□□□□□ -0.51
SREBF1-215ENST00000487401 ZNF282Q9UDV7 671 aaPredicted RBP11.89□□□□□ -0.51
SREBF1-215ENST00000487401 CDC14AQ9UNH5 594 aa11.89□□□□□ -0.51
SREBF1-215ENST00000487401 SPENQ96T58 3664 aaKnown RBP11.89□□□□□ -0.51
SREBF1-215ENST00000487401 GOLGA6L10A0A0M3HER8 536 aa11.88□□□□□ -0.51
SREBF1-215ENST00000487401 VSTM2BA6NLU5 285 aa11.88□□□□□ -0.51
SREBF1-215ENST00000487401 H0YGG7 62 aa11.88□□□□□ -0.51
SREBF1-215ENST00000487401 PGRMC1O00264 195 aaKnown RBP11.88□□□□□ -0.51
SREBF1-215ENST00000487401 PRPF4O43172 522 aaKnown RBP eCLIP11.88□□□□□ -0.51
SREBF1-215ENST00000487401 ZBTB14O43829 449 aa11.88□□□□□ -0.51
SREBF1-215ENST00000487401 KIF5CO60282 957 aa11.88□□□□□ -0.51
SREBF1-215ENST00000487401 NRP2O60462 931 aa11.88□□□□□ -0.51
SREBF1-215ENST00000487401 ALOX12BO75342 701 aa11.88□□□□□ -0.51
SREBF1-215ENST00000487401 ERGP11308 486 aa11.88□□□□□ -0.51
SREBF1-215ENST00000487401 ENO3P13929 434 aaPredicted RBP11.88□□□□□ -0.51
SREBF1-215ENST00000487401 FBLP22087 321 aaKnown RBP11.88□□□□□ -0.51
SREBF1-215ENST00000487401 GLRBP48167 497 aa11.88□□□□□ -0.51
SREBF1-215ENST00000487401 ARF3P61204 181 aaPredicted RBP11.88□□□□□ -0.51
SREBF1-215ENST00000487401 YBX1P67809 324 aaKnown RBP11.88□□□□□ -0.51
SREBF1-215ENST00000487401 ABATP80404 500 aa11.88□□□□□ -0.51
SREBF1-215ENST00000487401 PRDX1Q06830 199 aaKnown RBP11.88□□□□□ -0.51
SREBF1-215ENST00000487401 CTBP1Q13363 440 aa11.88□□□□□ -0.51
SREBF1-215ENST00000487401 MRPL49Q13405 166 aaKnown RBP11.88□□□□□ -0.51
SREBF1-215ENST00000487401 LONRF1Q17RB8 773 aa11.88□□□□□ -0.51
SREBF1-215ENST00000487401 EIF2S3LQ2VIR3 472 aaKnown RBP11.88□□□□□ -0.51
SREBF1-215ENST00000487401 ADCK2Q7Z695 626 aa11.88□□□□□ -0.51
SREBF1-215ENST00000487401 DENND6AQ8IWF6 608 aa11.88□□□□□ -0.51
SREBF1-215ENST00000487401 PARP9Q8IXQ6 854 aa11.88□□□□□ -0.51
SREBF1-215ENST00000487401 DTWD1Q8N5C7 304 aa11.88□□□□□ -0.51
SREBF1-215ENST00000487401 CSNK1A1LQ8N752 337 aa11.88□□□□□ -0.51
SREBF1-215ENST00000487401 PRR7Q8TB68 274 aa11.88□□□□□ -0.51
SREBF1-215ENST00000487401 STT3BQ8TCJ2 826 aa11.88□□□□□ -0.51
SREBF1-215ENST00000487401 CALML6Q8TD86 181 aa11.88□□□□□ -0.51
SREBF1-215ENST00000487401 GRK7Q8WTQ7 553 aa11.88□□□□□ -0.51
SREBF1-215ENST00000487401 ASB11Q8WXH4 323 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms