RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 RPS18P62269 152 aaKnown RBP15.58■□□□□ 0.08
DDR1-246ENST00000485023 USP10Q14694 798 aaKnown RBP15.58■□□□□ 0.08
DDR1-246ENST00000485023 SLMAPQ14BN4 828 aa15.58■□□□□ 0.08
DDR1-246ENST00000485023 TAF1BQ53T94 588 aaPredicted RBP15.58■□□□□ 0.08
DDR1-246ENST00000485023 ICE2Q659A1 982 aa15.58■□□□□ 0.08
DDR1-246ENST00000485023 LCN10Q6JVE6 187 aa15.58■□□□□ 0.08
DDR1-246ENST00000485023 SNRNP27Q8WVK2 155 aaKnown RBP15.58■□□□□ 0.08
DDR1-246ENST00000485023 ANKRD49Q8WVL7 239 aa15.58■□□□□ 0.08
DDR1-246ENST00000485023 SLC45A3Q96JT2 553 aa15.58■□□□□ 0.08
DDR1-246ENST00000485023 HIST1H2AHQ96KK5 128 aa15.58■□□□□ 0.08
DDR1-246ENST00000485023 BBC3Q96PG8 261 aaPredicted RBP15.58■□□□□ 0.08
DDR1-246ENST00000485023 HIST1H2AJQ99878 128 aa15.58■□□□□ 0.08
DDR1-246ENST00000485023 SELENOSQ9BQE4 189 aa15.58■□□□□ 0.08
DDR1-246ENST00000485023 RHOXF2Q9BQY4 288 aa15.58■□□□□ 0.08
DDR1-246ENST00000485023 MCMBPQ9BTE3 642 aa15.58■□□□□ 0.08
DDR1-246ENST00000485023 H2AFJQ9BTM1 129 aa15.58■□□□□ 0.08
DDR1-246ENST00000485023 PARVBQ9HBI1 364 aa15.58■□□□□ 0.08
DDR1-246ENST00000485023 CCDC177Q9NQR7 707 aaPredicted RBP15.58■□□□□ 0.08
DDR1-246ENST00000485023 ARL15Q9NXU5 204 aa15.58■□□□□ 0.08
DDR1-246ENST00000485023 DHCR7Q9UBM7 475 aaKnown RBP15.58■□□□□ 0.08
DDR1-246ENST00000485023 ZFYVE26Q68DK2 2539 aa15.58■□□□□ 0.08
DDR1-246ENST00000485023 ZNF891A8MT65 544 aaPredicted RBP15.57■□□□□ 0.08
DDR1-246ENST00000485023 H3BMH7 237 aa15.57■□□□□ 0.08
DDR1-246ENST00000485023 CDC7O00311 574 aa15.57■□□□□ 0.08
DDR1-246ENST00000485023 SLC16A5O15375 505 aa15.57■□□□□ 0.08
DDR1-246ENST00000485023 FKBP9O95302 570 aa15.57■□□□□ 0.08
DDR1-246ENST00000485023 KLK3P07288 261 aaPredicted RBP15.57■□□□□ 0.08
DDR1-246ENST00000485023 ECHS1P30084 290 aa15.57■□□□□ 0.08
DDR1-246ENST00000485023 RORAP35398 523 aa15.57■□□□□ 0.08
DDR1-246ENST00000485023 GMPRP36959 345 aa15.57■□□□□ 0.08
DDR1-246ENST00000485023 VSX2P58304 361 aaPredicted RBP15.57■□□□□ 0.08
DDR1-246ENST00000485023 SLC9A5Q14940 896 aa15.57■□□□□ 0.08
DDR1-246ENST00000485023 UAP1Q16222 522 aaPredicted RBP15.57■□□□□ 0.08
DDR1-246ENST00000485023 GLE1Q53GS7 698 aaKnown RBP15.57■□□□□ 0.08
DDR1-246ENST00000485023 FAM69BQ5VUD6 431 aa15.57■□□□□ 0.08
DDR1-246ENST00000485023 PRAMEF13Q5VWM6 474 aa15.57■□□□□ 0.08
DDR1-246ENST00000485023 FRMPD2BQ6IN97 320 aa15.57■□□□□ 0.08
DDR1-246ENST00000485023 AGTRAPQ6RW13 159 aa15.57■□□□□ 0.08
DDR1-246ENST00000485023 LRRC56Q8IYG6 542 aaPredicted RBP15.57■□□□□ 0.08
DDR1-246ENST00000485023 DSELQ8IZU8 1212 aa15.57■□□□□ 0.08
DDR1-246ENST00000485023 SPATA6LQ8N4H0 392 aa15.57■□□□□ 0.08
DDR1-246ENST00000485023 EXTL1Q92935 676 aa15.57■□□□□ 0.08
DDR1-246ENST00000485023 CCDC138Q96M89 665 aa15.57■□□□□ 0.08
DDR1-246ENST00000485023 UBL7Q96S82 380 aaPredicted RBP15.57■□□□□ 0.08
DDR1-246ENST00000485023 FMO2Q99518 471 aa15.57■□□□□ 0.08
DDR1-246ENST00000485023 EFHD1Q9BUP0 239 aa15.57■□□□□ 0.08
DDR1-246ENST00000485023 CHRNA10Q9GZZ6 450 aa15.57■□□□□ 0.08
DDR1-246ENST00000485023 CUEDC1Q9NWM3 386 aaPredicted RBP15.57■□□□□ 0.08
DDR1-246ENST00000485023 IGKV1-8A0A0C4DH67 115 aa15.56■□□□□ 0.08
DDR1-246ENST00000485023 TERTO14746 1132 aaKnown RBP15.56■□□□□ 0.08
DDR1-246ENST00000485023 CCNDBP1O95273 360 aa15.56■□□□□ 0.08
DDR1-246ENST00000485023 ACSL3O95573 720 aa15.56■□□□□ 0.08
DDR1-246ENST00000485023 EIF2S1P05198 315 aaKnown RBP15.56■□□□□ 0.08
DDR1-246ENST00000485023 POU4F1Q01851 419 aa15.56■□□□□ 0.08
DDR1-246ENST00000485023 RHDQ02161 417 aa15.56■□□□□ 0.08
DDR1-246ENST00000485023 CDC20Q12834 499 aa15.56■□□□□ 0.08
DDR1-246ENST00000485023 NAE1Q13564 534 aa15.56■□□□□ 0.08
DDR1-246ENST00000485023 ERV3-1Q14264 604 aa15.56■□□□□ 0.08
DDR1-246ENST00000485023 ZC3H12BQ5HYM0 836 aaKnown RBP15.56■□□□□ 0.08
DDR1-246ENST00000485023 PLD3Q8IV08 490 aa15.56■□□□□ 0.08
DDR1-246ENST00000485023 NKAPQ8N5F7 415 aaKnown RBP15.56■□□□□ 0.08
DDR1-246ENST00000485023 METTL27Q8N6F8 245 aaPredicted RBP15.56■□□□□ 0.08
DDR1-246ENST00000485023 ZUFSPQ96AP4 578 aa15.56■□□□□ 0.08
DDR1-246ENST00000485023 PYCR2Q96C36 320 aa15.56■□□□□ 0.08
DDR1-246ENST00000485023 TSPAN17Q96FV3 270 aa15.56■□□□□ 0.08
DDR1-246ENST00000485023 GPR22Q99680 433 aa15.56■□□□□ 0.08
DDR1-246ENST00000485023 NDC1Q9BTX1 674 aa15.56■□□□□ 0.08
DDR1-246ENST00000485023 CDC42EP4Q9H3Q1 356 aaKnown RBP15.56■□□□□ 0.08
DDR1-246ENST00000485023 ACTL8Q9H568 366 aa15.56■□□□□ 0.08
DDR1-246ENST00000485023 TXLNGQ9NUQ3 528 aa15.56■□□□□ 0.08
DDR1-246ENST00000485023 NDOR1Q9UHB4 597 aa15.56■□□□□ 0.08
DDR1-246ENST00000485023 NFU1Q9UMS0 254 aa15.56■□□□□ 0.08
DDR1-246ENST00000485023 SH2B3Q9UQQ2 575 aa15.56■□□□□ 0.08
DDR1-246ENST00000485023 SNRNP200O75643 2136 aaKnown RBP15.55■□□□□ 0.08
DDR1-246ENST00000485023 LOC105369274A0A096LPK9 316 aa15.55■□□□□ 0.08
DDR1-246ENST00000485023 LOC102723532A0A0G2JNH3 316 aa15.55■□□□□ 0.08
DDR1-246ENST00000485023 CDC14CA4D256 554 aa15.55■□□□□ 0.08
DDR1-246ENST00000485023 OR2A25A4D2G3 310 aa15.55■□□□□ 0.08
DDR1-246ENST00000485023 TARM1B6A8C7 271 aa15.55■□□□□ 0.08
DDR1-246ENST00000485023 STATHP02808 62 aa15.55■□□□□ 0.08
DDR1-246ENST00000485023 HBQ1P09105 142 aa15.55■□□□□ 0.08
DDR1-246ENST00000485023 STMN1P16949 149 aa15.55■□□□□ 0.08
DDR1-246ENST00000485023 ALAS2P22557 587 aa15.55■□□□□ 0.08
DDR1-246ENST00000485023 PHBP35232 272 aa15.55■□□□□ 0.08
DDR1-246ENST00000485023 SPRP35270 261 aaPredicted RBP15.55■□□□□ 0.08
DDR1-246ENST00000485023 NFKB2Q00653 900 aa15.55■□□□□ 0.08
DDR1-246ENST00000485023 PRDX1Q06830 199 aaKnown RBP15.55■□□□□ 0.08
DDR1-246ENST00000485023 BMPR2Q13873 1038 aa15.55■□□□□ 0.08
DDR1-246ENST00000485023 TSNQ15631 228 aaKnown RBP15.55■□□□□ 0.08
DDR1-246ENST00000485023 SOWAHCQ53LP3 525 aaPredicted RBP15.55■□□□□ 0.08
DDR1-246ENST00000485023 GRTP1Q5TC63 336 aa15.55■□□□□ 0.08
DDR1-246ENST00000485023 TLDC1Q6P9B6 456 aa15.55■□□□□ 0.08
DDR1-246ENST00000485023 PCSK4Q6UW60 755 aa15.55■□□□□ 0.08
DDR1-246ENST00000485023 FAM198BQ6UWH4 519 aa15.55■□□□□ 0.08
DDR1-246ENST00000485023 SBSNQ6UWP8 590 aa15.55■□□□□ 0.08
DDR1-246ENST00000485023 TTLL10Q6ZVT0 673 aa15.55■□□□□ 0.08
DDR1-246ENST00000485023 CYS1Q717R9 158 aa15.55■□□□□ 0.08
DDR1-246ENST00000485023 RNF44Q7L0R7 432 aa15.55■□□□□ 0.08
DDR1-246ENST00000485023 CMC1Q7Z7K0 106 aa15.55■□□□□ 0.08
DDR1-246ENST00000485023 OR4N4Q8N0Y3 316 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms