RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 YOD1Q5VVQ6 348 aaPredicted RBP17.74■□□□□ 0.43
CLK1-211ENST00000481641 ZNF470Q6ECI4 717 aa17.74■□□□□ 0.43
CLK1-211ENST00000481641 FBXO42Q6P3S6 717 aa17.74■□□□□ 0.43
CLK1-211ENST00000481641 GIMAP7Q8NHV1 300 aa17.74■□□□□ 0.43
CLK1-211ENST00000481641 MAGEC3Q8TD91 643 aa17.74■□□□□ 0.43
CLK1-211ENST00000481641 PSMG3-AS1Q96PY0 264 aa17.74■□□□□ 0.43
CLK1-211ENST00000481641 PKP4Q99569 1192 aa17.74■□□□□ 0.43
CLK1-211ENST00000481641 DPH7Q9BTV6 452 aa17.74■□□□□ 0.43
CLK1-211ENST00000481641 SYNPO2LQ9H987 977 aa17.74■□□□□ 0.43
CLK1-211ENST00000481641 ATP13A2Q9NQ11 1180 aa17.74■□□□□ 0.43
CLK1-211ENST00000481641 KLK4Q9Y5K2 254 aa17.74■□□□□ 0.43
CLK1-211ENST00000481641 HS3ST3B1Q9Y662 390 aa17.74■□□□□ 0.43
CLK1-211ENST00000481641 ICE1Q9Y2F5 2266 aa17.73■□□□□ 0.43
CLK1-211ENST00000481641 ZCWPW2A0A1B0GU75 182 aa17.73■□□□□ 0.43
CLK1-211ENST00000481641 FAM237BA0A1B0GVD1 139 aa17.73■□□□□ 0.43
CLK1-211ENST00000481641 CTAGE9A4FU28 777 aa17.73■□□□□ 0.43
CLK1-211ENST00000481641 SDR42E2A6NKP2 422 aa17.73■□□□□ 0.43
CLK1-211ENST00000481641 SRPX2O60687 465 aaPredicted RBP17.73■□□□□ 0.43
CLK1-211ENST00000481641 PSIP1O75475 530 aaKnown RBP17.73■□□□□ 0.43
CLK1-211ENST00000481641 USP1O94782 785 aa17.73■□□□□ 0.43
CLK1-211ENST00000481641 IGHEP01854 428 aa17.73■□□□□ 0.43
CLK1-211ENST00000481641 ALBP02768 609 aa17.73■□□□□ 0.43
CLK1-211ENST00000481641 ITGA3P26006 1051 aa17.73■□□□□ 0.43
CLK1-211ENST00000481641 CMPK1P30085 196 aa17.73■□□□□ 0.43
CLK1-211ENST00000481641 CLCN7P51798 805 aa17.73■□□□□ 0.43
CLK1-211ENST00000481641 EIF2S3LQ2VIR3 472 aaKnown RBP17.73■□□□□ 0.43
CLK1-211ENST00000481641 FAM214AQ32MH5 1076 aa17.73■□□□□ 0.43
CLK1-211ENST00000481641 FHL5Q5TD97 284 aa17.73■□□□□ 0.43
CLK1-211ENST00000481641 ZNF549Q6P9A3 640 aa17.73■□□□□ 0.43
CLK1-211ENST00000481641 CCDC137Q6PK04 289 aaKnown RBP17.73■□□□□ 0.43
CLK1-211ENST00000481641 KIRREL2Q6UWL6 708 aa17.73■□□□□ 0.43
CLK1-211ENST00000481641 RNF44Q7L0R7 432 aa17.73■□□□□ 0.43
CLK1-211ENST00000481641 PRSS58Q8IYP2 241 aa17.73■□□□□ 0.43
CLK1-211ENST00000481641 CISD2Q8N5K1 135 aaKnown RBP17.73■□□□□ 0.43
CLK1-211ENST00000481641 PPFIBP2Q8ND30 876 aa17.73■□□□□ 0.43
CLK1-211ENST00000481641 INPP5DQ92835 1189 aa17.73■□□□□ 0.43
CLK1-211ENST00000481641 SNRNP40Q96DI7 357 aaKnown RBP17.73■□□□□ 0.43
CLK1-211ENST00000481641 SERPINB12Q96P63 405 aa17.73■□□□□ 0.43
CLK1-211ENST00000481641 SLC26A1Q9H2B4 701 aa17.73■□□□□ 0.43
CLK1-211ENST00000481641 WDR54Q9H977 334 aa17.73■□□□□ 0.43
CLK1-211ENST00000481641 ENAMQ9NRM1 1142 aa17.73■□□□□ 0.43
CLK1-211ENST00000481641 ABCF3Q9NUQ8 709 aa17.73■□□□□ 0.43
CLK1-211ENST00000481641 MED16Q9Y2X0 877 aa17.73■□□□□ 0.43
CLK1-211ENST00000481641 NEU2Q9Y3R4 380 aa17.73■□□□□ 0.43
CLK1-211ENST00000481641 FAM169AQ9Y6X4 670 aa17.73■□□□□ 0.43
CLK1-211ENST00000481641 HEATR5BQ9P2D3 2071 aa17.73■□□□□ 0.43
CLK1-211ENST00000481641 SPTBN1Q01082 2364 aaKnown RBP17.72■□□□□ 0.43
CLK1-211ENST00000481641 IGKV1-8A0A0C4DH67 115 aa17.72■□□□□ 0.43
CLK1-211ENST00000481641 OR2A25A4D2G3 310 aa17.72■□□□□ 0.43
CLK1-211ENST00000481641 MYO1CO00159 1063 aa17.72■□□□□ 0.43
CLK1-211ENST00000481641 KIF5CO60282 957 aa17.72■□□□□ 0.43
CLK1-211ENST00000481641 SEMA7AO75326 666 aa17.72■□□□□ 0.43
CLK1-211ENST00000481641 AGFG2O95081 481 aa17.72■□□□□ 0.43
CLK1-211ENST00000481641 ERGP11308 486 aa17.72■□□□□ 0.43
CLK1-211ENST00000481641 GP1BBP13224 206 aa17.72■□□□□ 0.43
CLK1-211ENST00000481641 THOC5Q13769 683 aaKnown RBP17.72■□□□□ 0.43
CLK1-211ENST00000481641 HIST2H2BCQ6DN03 193 aa17.72■□□□□ 0.43
CLK1-211ENST00000481641 REXO1L1PQ8IX06 675 aa17.72■□□□□ 0.43
CLK1-211ENST00000481641 PARP9Q8IXQ6 854 aa17.72■□□□□ 0.43
CLK1-211ENST00000481641 MCUQ8NE86 351 aa17.72■□□□□ 0.43
CLK1-211ENST00000481641 COG1Q8WTW3 980 aa17.72■□□□□ 0.43
CLK1-211ENST00000481641 SMPDL3AQ92484 453 aa17.72■□□□□ 0.43
CLK1-211ENST00000481641 PBKQ96KB5 322 aa17.72■□□□□ 0.43
CLK1-211ENST00000481641 C10orf90Q96M02 699 aa17.72■□□□□ 0.43
CLK1-211ENST00000481641 ZNF304Q9HCX3 659 aa17.72■□□□□ 0.43
CLK1-211ENST00000481641 MRPS30Q9NP92 439 aaKnown RBP17.72■□□□□ 0.43
CLK1-211ENST00000481641 ASF1BQ9NVP2 202 aa17.72■□□□□ 0.43
CLK1-211ENST00000481641 INTS10Q9NVR2 710 aaKnown RBP17.72■□□□□ 0.43
CLK1-211ENST00000481641 B3GNT3Q9Y2A9 372 aa17.72■□□□□ 0.43
CLK1-211ENST00000481641 JRKLQ9Y4A0 524 aa17.72■□□□□ 0.43
CLK1-211ENST00000481641 CSAG2Q9Y5P2 127 aa17.72■□□□□ 0.43
CLK1-211ENST00000481641 CNTRLQ7Z7A1 2325 aa17.71■□□□□ 0.43
CLK1-211ENST00000481641 VSTM2BA6NLU5 285 aa17.71■□□□□ 0.43
CLK1-211ENST00000481641 H0YGG7 62 aa17.71■□□□□ 0.43
CLK1-211ENST00000481641 FFAR3O14843 346 aa17.71■□□□□ 0.43
CLK1-211ENST00000481641 GPR42O15529 346 aa17.71■□□□□ 0.43
CLK1-211ENST00000481641 ALPPP05187 535 aa17.71■□□□□ 0.43
CLK1-211ENST00000481641 RNF224P0DH78 156 aa17.71■□□□□ 0.43
CLK1-211ENST00000481641 MLNP12872 115 aa17.71■□□□□ 0.43
CLK1-211ENST00000481641 RPA3P35244 121 aaPredicted RBP17.71■□□□□ 0.43
CLK1-211ENST00000481641 SLC1A2P43004 574 aa17.71■□□□□ 0.43
CLK1-211ENST00000481641 PNLIPRP1P54315 467 aa17.71■□□□□ 0.43
CLK1-211ENST00000481641 SOX8P57073 446 aa17.71■□□□□ 0.43
CLK1-211ENST00000481641 ARF3P61204 181 aaPredicted RBP17.71■□□□□ 0.43
CLK1-211ENST00000481641 AIMP2Q13155 320 aaKnown RBP17.71■□□□□ 0.43
CLK1-211ENST00000481641 RBBP7Q16576 425 aa17.71■□□□□ 0.43
CLK1-211ENST00000481641 CYP1B1Q16678 543 aa17.71■□□□□ 0.43
CLK1-211ENST00000481641 PRAMEF13Q5VWM6 474 aa17.71■□□□□ 0.43
CLK1-211ENST00000481641 IGFL3Q6UXB1 125 aa17.71■□□□□ 0.43
CLK1-211ENST00000481641 ZFYVE21Q9BQ24 234 aa17.71■□□□□ 0.43
CLK1-211ENST00000481641 PLCD4Q9BRC7 762 aa17.71■□□□□ 0.43
CLK1-211ENST00000481641 LRRC4CQ9HCJ2 640 aa17.71■□□□□ 0.43
CLK1-211ENST00000481641 XAB2Q9HCS7 855 aaKnown RBP17.71■□□□□ 0.43
CLK1-211ENST00000481641 C20orf96Q9NUD7 363 aaPredicted RBP17.71■□□□□ 0.43
CLK1-211ENST00000481641 TAC3Q9UHF0 121 aa17.71■□□□□ 0.43
CLK1-211ENST00000481641 MAD1L1Q9Y6D9 718 aa17.71■□□□□ 0.43
CLK1-211ENST00000481641 MAGEB16A2A368 324 aa17.7■□□□□ 0.42
CLK1-211ENST00000481641 SLC16A8O95907 504 aa17.7■□□□□ 0.42
CLK1-211ENST00000481641 SYF2O95926 243 aaKnown RBP17.7■□□□□ 0.42
CLK1-211ENST00000481641 CATP04040 527 aaKnown RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms