RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 TESMINQ9Y4I5 508 aa12.96□□□□□ -0.33
PDZRN3-208ENST00000479530 AGAP5A6NIR3 686 aa12.96□□□□□ -0.34
PDZRN3-208ENST00000479530 STX7O15400 261 aaKnown RBP12.96□□□□□ -0.34
PDZRN3-208ENST00000479530 CASP3P42574 277 aa12.96□□□□□ -0.34
PDZRN3-208ENST00000479530 TM4SF4P48230 202 aa12.96□□□□□ -0.34
PDZRN3-208ENST00000479530 CLK1P49759 484 aaKnown RBP12.96□□□□□ -0.34
PDZRN3-208ENST00000479530 KDM4DQ6B0I6 523 aa12.96□□□□□ -0.34
PDZRN3-208ENST00000479530 SBSNQ6UWP8 590 aa12.96□□□□□ -0.34
PDZRN3-208ENST00000479530 VTCN1Q7Z7D3 282 aa12.96□□□□□ -0.34
PDZRN3-208ENST00000479530 LACC1Q8IV20 430 aa12.96□□□□□ -0.34
PDZRN3-208ENST00000479530 SYTL1Q8IYJ3 562 aa12.96□□□□□ -0.34
PDZRN3-208ENST00000479530 TTC29Q8NA56 475 aaPredicted RBP12.96□□□□□ -0.34
PDZRN3-208ENST00000479530 APH1BQ8WW43 257 aa12.96□□□□□ -0.34
PDZRN3-208ENST00000479530 ATL1Q8WXF7 558 aa12.96□□□□□ -0.34
PDZRN3-208ENST00000479530 MTFMTQ96DP5 389 aaKnown RBP12.96□□□□□ -0.34
PDZRN3-208ENST00000479530 FAM120BQ96EK7 910 aaKnown RBP12.96□□□□□ -0.34
PDZRN3-208ENST00000479530 ZBTB18Q99592 522 aa12.96□□□□□ -0.34
PDZRN3-208ENST00000479530 TNKS2Q9H2K2 1166 aa12.96□□□□□ -0.34
PDZRN3-208ENST00000479530 COMMD10Q9Y6G5 202 aa12.96□□□□□ -0.34
PDZRN3-208ENST00000479530 METTL15A6NJ78 407 aa12.95□□□□□ -0.34
PDZRN3-208ENST00000479530 E5RI56 91 aa12.95□□□□□ -0.34
PDZRN3-208ENST00000479530 DSCR3O14972 297 aa12.95□□□□□ -0.34
PDZRN3-208ENST00000479530 ASNA1O43681 348 aa12.95□□□□□ -0.34
PDZRN3-208ENST00000479530 DNTTP04053 509 aa12.95□□□□□ -0.34
PDZRN3-208ENST00000479530 GADD45AP24522 165 aa12.95□□□□□ -0.34
PDZRN3-208ENST00000479530 COPZ1P61923 177 aa12.95□□□□□ -0.34
PDZRN3-208ENST00000479530 DMPKQ09013 629 aa12.95□□□□□ -0.34
PDZRN3-208ENST00000479530 RFX4Q33E94 735 aa12.95□□□□□ -0.34
PDZRN3-208ENST00000479530 CALHM3Q86XJ0 350 aa12.95□□□□□ -0.34
PDZRN3-208ENST00000479530 PLPP6Q8IY26 295 aa12.95□□□□□ -0.34
PDZRN3-208ENST00000479530 SETD9Q8NE22 299 aa12.95□□□□□ -0.34
PDZRN3-208ENST00000479530 DNASE1L2Q92874 299 aa12.95□□□□□ -0.34
PDZRN3-208ENST00000479530 SCLYQ96I15 445 aa12.95□□□□□ -0.34
PDZRN3-208ENST00000479530 ABCG8Q9H221 673 aa12.95□□□□□ -0.34
PDZRN3-208ENST00000479530 SERHLQ9NQF3 203 aa12.95□□□□□ -0.34
PDZRN3-208ENST00000479530 STARD7Q9NQZ5 370 aa12.95□□□□□ -0.34
PDZRN3-208ENST00000479530 C1orf109Q9NX04 203 aa12.95□□□□□ -0.34
PDZRN3-208ENST00000479530 NDRG4Q9ULP0 352 aaKnown RBP12.95□□□□□ -0.34
PDZRN3-208ENST00000479530 VPS4AQ9UN37 437 aa12.95□□□□□ -0.34
PDZRN3-208ENST00000479530 EIF3LQ9Y262 564 aaKnown RBP12.95□□□□□ -0.34
PDZRN3-208ENST00000479530 PRSS21Q9Y6M0 314 aa12.95□□□□□ -0.34
PDZRN3-208ENST00000479530 MOXD2PA6NHM9 499 aa12.95□□□□□ -0.34
PDZRN3-208ENST00000479530 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.95□□□□□ -0.34
PDZRN3-208ENST00000479530 M0R082 166 aa12.95□□□□□ -0.34
PDZRN3-208ENST00000479530 IFRD1O00458 451 aaPredicted RBP12.95□□□□□ -0.34
PDZRN3-208ENST00000479530 TAPBPO15533 448 aa12.95□□□□□ -0.34
PDZRN3-208ENST00000479530 AOC2O75106 756 aa12.95□□□□□ -0.34
PDZRN3-208ENST00000479530 CLCN7P51798 805 aa12.95□□□□□ -0.34
PDZRN3-208ENST00000479530 VLDLRP98155 873 aa12.95□□□□□ -0.34
PDZRN3-208ENST00000479530 SREBF2Q12772 1141 aa12.95□□□□□ -0.34
PDZRN3-208ENST00000479530 HECTD3Q5T447 861 aa12.95□□□□□ -0.34
PDZRN3-208ENST00000479530 FAM151BQ6UXP7 276 aa12.95□□□□□ -0.34
PDZRN3-208ENST00000479530 SNX20Q7Z614 316 aa12.95□□□□□ -0.34
PDZRN3-208ENST00000479530 TMCO2Q7Z6W1 182 aaPredicted RBP12.95□□□□□ -0.34
PDZRN3-208ENST00000479530 METTL4Q8N3J2 472 aa12.95□□□□□ -0.34
PDZRN3-208ENST00000479530 CARNMT1Q8N4J0 409 aa12.95□□□□□ -0.34
PDZRN3-208ENST00000479530 KIAA1958Q8N8K9 716 aa12.95□□□□□ -0.34
PDZRN3-208ENST00000479530 OR52E4Q8NGH9 312 aa12.95□□□□□ -0.34
PDZRN3-208ENST00000479530 PROX1Q92786 737 aa12.95□□□□□ -0.34
PDZRN3-208ENST00000479530 PDLIM5Q96HC4 596 aaKnown RBP12.95□□□□□ -0.34
PDZRN3-208ENST00000479530 CPPED1Q9BRF8 314 aaPredicted RBP12.95□□□□□ -0.34
PDZRN3-208ENST00000479530 CLMPQ9H6B4 373 aa12.95□□□□□ -0.34
PDZRN3-208ENST00000479530 MAGIXQ9H6Y5 334 aa12.95□□□□□ -0.34
PDZRN3-208ENST00000479530 NEK6Q9HC98 313 aa12.95□□□□□ -0.34
PDZRN3-208ENST00000479530 PDP1Q9P0J1 537 aaPredicted RBP12.95□□□□□ -0.34
PDZRN3-208ENST00000479530 RIMKLBQ9ULI2 386 aa12.95□□□□□ -0.34
PDZRN3-208ENST00000479530 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.94□□□□□ -0.34
PDZRN3-208ENST00000479530 H0Y626 953 aa12.94□□□□□ -0.34
PDZRN3-208ENST00000479530 SMAD6O43541 496 aaKnown RBP12.94□□□□□ -0.34
PDZRN3-208ENST00000479530 AIREO43918 545 aa12.94□□□□□ -0.34
PDZRN3-208ENST00000479530 SEC22BO75396 215 aa12.94□□□□□ -0.34
PDZRN3-208ENST00000479530 CLDN11O75508 207 aa12.94□□□□□ -0.34
PDZRN3-208ENST00000479530 TRIM16O95361 564 aa12.94□□□□□ -0.34
PDZRN3-208ENST00000479530 NTRK1P04629 796 aa12.94□□□□□ -0.34
PDZRN3-208ENST00000479530 PTPN2P17706 415 aa12.94□□□□□ -0.34
PDZRN3-208ENST00000479530 MAGEA2P43356 314 aa12.94□□□□□ -0.34
PDZRN3-208ENST00000479530 KEAP1Q14145 624 aa12.94□□□□□ -0.34
PDZRN3-208ENST00000479530 LHX8Q68G74 356 aa12.94□□□□□ -0.34
PDZRN3-208ENST00000479530 GDPD3Q7L5L3 318 aa12.94□□□□□ -0.34
PDZRN3-208ENST00000479530 HEATR4Q86WZ0 1026 aa12.94□□□□□ -0.34
PDZRN3-208ENST00000479530 MMAAQ8IVH4 418 aaKnown RBP12.94□□□□□ -0.34
PDZRN3-208ENST00000479530 RGL4Q8IZJ4 473 aa12.94□□□□□ -0.34
PDZRN3-208ENST00000479530 PARP16Q8N5Y8 322 aa12.94□□□□□ -0.34
PDZRN3-208ENST00000479530 TP53INP1Q96A56 240 aa12.94□□□□□ -0.34
PDZRN3-208ENST00000479530 SIGLEC11Q96RL6 698 aa12.94□□□□□ -0.34
PDZRN3-208ENST00000479530 TTLL2Q9BWV7 592 aa12.94□□□□□ -0.34
PDZRN3-208ENST00000479530 FRMPD3Q5JV73 1810 aa12.94□□□□□ -0.34
PDZRN3-208ENST00000479530 ILVBLA1L0T0 632 aa12.94□□□□□ -0.34
PDZRN3-208ENST00000479530 CLDN24A6NM45 220 aa12.94□□□□□ -0.34
PDZRN3-208ENST00000479530 RAD51BO15315 384 aa12.94□□□□□ -0.34
PDZRN3-208ENST00000479530 FFAR2O15552 330 aa12.94□□□□□ -0.34
PDZRN3-208ENST00000479530 DYRK3O43781 588 aa12.94□□□□□ -0.34
PDZRN3-208ENST00000479530 CXCR4P61073 352 aa12.94□□□□□ -0.34
PDZRN3-208ENST00000479530 PLD1Q13393 1074 aa12.94□□□□□ -0.34
PDZRN3-208ENST00000479530 PCBP2Q15366 365 aaKnown RBP eCLIP12.94□□□□□ -0.34
PDZRN3-208ENST00000479530 PLEKHG6Q3KR16 790 aa12.94□□□□□ -0.34
PDZRN3-208ENST00000479530 UBE2UQ5VVX9 321 aa12.94□□□□□ -0.34
PDZRN3-208ENST00000479530 OR2T5Q6IEZ7 315 aa12.94□□□□□ -0.34
PDZRN3-208ENST00000479530 CCBE1Q6UXH8 406 aaPredicted RBP12.94□□□□□ -0.34
PDZRN3-208ENST00000479530 GALNT13Q8IUC8 556 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms