RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 TIAF1O95411 115 aa14.86□□□□□ -0.03
C9orf3-217ENST00000479161 CNTFP26441 200 aa14.86□□□□□ -0.03
C9orf3-217ENST00000479161 RORAP35398 523 aa14.86□□□□□ -0.03
C9orf3-217ENST00000479161 GCGRP47871 477 aa14.86□□□□□ -0.03
C9orf3-217ENST00000479161 PHKG1Q16816 387 aa14.86□□□□□ -0.03
C9orf3-217ENST00000479161 RHBDD2Q6NTF9 364 aa14.86□□□□□ -0.03
C9orf3-217ENST00000479161 AGTRAPQ6RW13 159 aa14.86□□□□□ -0.03
C9orf3-217ENST00000479161 RNF44Q7L0R7 432 aa14.86□□□□□ -0.03
C9orf3-217ENST00000479161 TMEM126BQ8IUX1 230 aa14.86□□□□□ -0.03
C9orf3-217ENST00000479161 ZSCAN1Q8NBB4 408 aa14.86□□□□□ -0.03
C9orf3-217ENST00000479161 OR56A3Q8NH54 315 aa14.86□□□□□ -0.03
C9orf3-217ENST00000479161 PROKR1Q8TCW9 393 aa14.86□□□□□ -0.03
C9orf3-217ENST00000479161 SLC44A1Q8WWI5 657 aa14.86□□□□□ -0.03
C9orf3-217ENST00000479161 KIAA1143Q96AT1 154 aaPredicted RBP14.86□□□□□ -0.03
C9orf3-217ENST00000479161 PLCD4Q9BRC7 762 aa14.86□□□□□ -0.03
C9orf3-217ENST00000479161 GPR87Q9BY21 358 aa14.86□□□□□ -0.03
C9orf3-217ENST00000479161 TXLNGYQ9BZA5 131 aa14.86□□□□□ -0.03
C9orf3-217ENST00000479161 MRPS30Q9NP92 439 aaKnown RBP14.86□□□□□ -0.03
C9orf3-217ENST00000479161 LHX9Q9NQ69 397 aa14.86□□□□□ -0.03
C9orf3-217ENST00000479161 CCDC177Q9NQR7 707 aaPredicted RBP14.86□□□□□ -0.03
C9orf3-217ENST00000479161 ARL15Q9NXU5 204 aa14.86□□□□□ -0.03
C9orf3-217ENST00000479161 EURLQ9NYK6 297 aa14.86□□□□□ -0.03
C9orf3-217ENST00000479161 FETUBQ9UGM5 382 aa14.86□□□□□ -0.03
C9orf3-217ENST00000479161 CIDEBQ9UHD4 219 aa14.86□□□□□ -0.03
C9orf3-217ENST00000479161 ZNF180Q9UJW8 692 aa14.86□□□□□ -0.03
C9orf3-217ENST00000479161 KCND3Q9UK17 655 aa14.86□□□□□ -0.03
C9orf3-217ENST00000479161 NFU1Q9UMS0 254 aa14.86□□□□□ -0.03
C9orf3-217ENST00000479161 OARD1Q9Y530 152 aa14.86□□□□□ -0.03
C9orf3-217ENST00000479161 FER1L5A0AVI2 2057 aa14.86□□□□□ -0.03
C9orf3-217ENST00000479161 NBEAQ8NFP9 2946 aa14.86□□□□□ -0.03
C9orf3-217ENST00000479161 FITM1A5D6W6 292 aa14.85□□□□□ -0.03
C9orf3-217ENST00000479161 PIAS1O75925 651 aa14.85□□□□□ -0.03
C9orf3-217ENST00000479161 OR2B3O76000 313 aa14.85□□□□□ -0.03
C9orf3-217ENST00000479161 SYF2O95926 243 aaKnown RBP14.85□□□□□ -0.03
C9orf3-217ENST00000479161 ONECUT2O95948 504 aa14.85□□□□□ -0.03
C9orf3-217ENST00000479161 KLK3P07288 261 aaPredicted RBP14.85□□□□□ -0.03
C9orf3-217ENST00000479161 CD63P08962 238 aa14.85□□□□□ -0.03
C9orf3-217ENST00000479161 EZRP15311 586 aaKnown RBP14.85□□□□□ -0.03
C9orf3-217ENST00000479161 SERPINB9P50453 376 aa14.85□□□□□ -0.03
C9orf3-217ENST00000479161 ARSFP54793 590 aa14.85□□□□□ -0.03
C9orf3-217ENST00000479161 MC1RQ01726 317 aa14.85□□□□□ -0.03
C9orf3-217ENST00000479161 COL28A1Q2UY09 1125 aa14.85□□□□□ -0.03
C9orf3-217ENST00000479161 LCTLQ6UWM7 567 aa14.85□□□□□ -0.03
C9orf3-217ENST00000479161 GPR155Q7Z3F1 870 aa14.85□□□□□ -0.03
C9orf3-217ENST00000479161 MCATQ8IVS2 390 aaKnown RBP14.85□□□□□ -0.03
C9orf3-217ENST00000479161 KLHDC8AQ8IYD2 350 aa14.85□□□□□ -0.03
C9orf3-217ENST00000479161 DSELQ8IZU8 1212 aa14.85□□□□□ -0.03
C9orf3-217ENST00000479161 C2orf73Q8N5S3 287 aaPredicted RBP14.85□□□□□ -0.03
C9orf3-217ENST00000479161 GALNT6Q8NCL4 622 aa14.85□□□□□ -0.03
C9orf3-217ENST00000479161 ANKRD49Q8WVL7 239 aa14.85□□□□□ -0.03
C9orf3-217ENST00000479161 N4BP2L2Q92802 583 aaPredicted RBP14.85□□□□□ -0.03
C9orf3-217ENST00000479161 ISL2Q96A47 359 aa14.85□□□□□ -0.03
C9orf3-217ENST00000479161 MIPEPQ99797 713 aa14.85□□□□□ -0.03
C9orf3-217ENST00000479161 C17orf62Q9BQA9 187 aa14.85□□□□□ -0.03
C9orf3-217ENST00000479161 HAUS8Q9BT25 410 aa14.85□□□□□ -0.03
C9orf3-217ENST00000479161 DPH7Q9BTV6 452 aa14.85□□□□□ -0.03
C9orf3-217ENST00000479161 SARGQ9BW04 601 aa14.85□□□□□ -0.03
C9orf3-217ENST00000479161 ACTR5Q9H9F9 607 aaPredicted RBP14.85□□□□□ -0.03
C9orf3-217ENST00000479161 TMEM184CQ9NVA4 438 aa14.85□□□□□ -0.03
C9orf3-217ENST00000479161 CTNNAL1Q9UBT7 734 aa14.85□□□□□ -0.03
C9orf3-217ENST00000479161 TSR3Q9UJK0 312 aaKnown RBP14.85□□□□□ -0.03
C9orf3-217ENST00000479161 KCNE1BA0A087WTH5 132 aa14.84□□□□□ -0.03
C9orf3-217ENST00000479161 A0A087WUV0 522 aaPredicted RBP14.84□□□□□ -0.03
C9orf3-217ENST00000479161 IGKV1-8A0A0C4DH67 115 aa14.84□□□□□ -0.03
C9orf3-217ENST00000479161 KRT87PA6NCN2 255 aa14.84□□□□□ -0.03
C9orf3-217ENST00000479161 MEN1O00255 615 aa14.84□□□□□ -0.03
C9orf3-217ENST00000479161 ZSCAN9O15535 394 aaPredicted RBP14.84□□□□□ -0.03
C9orf3-217ENST00000479161 ANXA5P08758 320 aa14.84□□□□□ -0.03
C9orf3-217ENST00000479161 RAB40ALP0C0E4 278 aa14.84□□□□□ -0.03
C9orf3-217ENST00000479161 RHOXF2BP0C7M4 288 aa14.84□□□□□ -0.03
C9orf3-217ENST00000479161 SAT1P21673 171 aa14.84□□□□□ -0.03
C9orf3-217ENST00000479161 PSMB5P28074 263 aa14.84□□□□□ -0.03
C9orf3-217ENST00000479161 FAM214AQ32MH5 1076 aa14.84□□□□□ -0.03
C9orf3-217ENST00000479161 CAPN13Q6MZZ7 669 aaPredicted RBP14.84□□□□□ -0.03
C9orf3-217ENST00000479161 SUSD1Q6UWL2 747 aa14.84□□□□□ -0.03
C9orf3-217ENST00000479161 PAQR7Q86WK9 346 aa14.84□□□□□ -0.03
C9orf3-217ENST00000479161 SLC38A9Q8NBW4 561 aa14.84□□□□□ -0.03
C9orf3-217ENST00000479161 LSM14AQ8ND56 463 aaKnown RBP14.84□□□□□ -0.03
C9orf3-217ENST00000479161 KIAA1191Q96A73 305 aa14.84□□□□□ -0.03
C9orf3-217ENST00000479161 THAP11Q96EK4 314 aa14.84□□□□□ -0.03
C9orf3-217ENST00000479161 WBP1Q96G27 269 aa14.84□□□□□ -0.03
C9orf3-217ENST00000479161 ZFYVE21Q9BQ24 234 aa14.84□□□□□ -0.03
C9orf3-217ENST00000479161 RHOXF2Q9BQY4 288 aa14.84□□□□□ -0.03
C9orf3-217ENST00000479161 KLHL25Q9H0H3 589 aa14.84□□□□□ -0.03
C9orf3-217ENST00000479161 GPN2Q9H9Y4 310 aaPredicted RBP14.84□□□□□ -0.03
C9orf3-217ENST00000479161 TAC3Q9UHF0 121 aa14.84□□□□□ -0.03
C9orf3-217ENST00000479161 LOC101059948A0A1B0GTJ6 334 aa14.83□□□□□ -0.04
C9orf3-217ENST00000479161 HMX2A2RU54 273 aa14.83□□□□□ -0.04
C9orf3-217ENST00000479161 TXNDC9O14530 226 aa14.83□□□□□ -0.04
C9orf3-217ENST00000479161 ZNF749O43361 778 aa14.83□□□□□ -0.04
C9orf3-217ENST00000479161 HCRTR1O43613 425 aa14.83□□□□□ -0.04
C9orf3-217ENST00000479161 CTSVO60911 334 aa14.83□□□□□ -0.04
C9orf3-217ENST00000479161 ACSL3O95573 720 aa14.83□□□□□ -0.04
C9orf3-217ENST00000479161 NTRK1P04629 796 aa14.83□□□□□ -0.04
C9orf3-217ENST00000479161 ITGB2P05107 769 aa14.83□□□□□ -0.04
C9orf3-217ENST00000479161 SLC35E2BP0CK96 405 aa14.83□□□□□ -0.04
C9orf3-217ENST00000479161 CCDC166P0CW27 439 aa14.83□□□□□ -0.04
C9orf3-217ENST00000479161 LIFP15018 202 aa14.83□□□□□ -0.04
C9orf3-217ENST00000479161 CD1DP15813 335 aa14.83□□□□□ -0.04
C9orf3-217ENST00000479161 NPPBP16860 134 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms