RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 DGCR6Q14129 220 aa10.49□□□□□ -0.73
VPS52-217ENST00000478934 NR1D2Q14995 579 aa10.49□□□□□ -0.73
VPS52-217ENST00000478934 NOXRED1Q6NXP6 359 aa10.49□□□□□ -0.73
VPS52-217ENST00000478934 SLC39A5Q6ZMH5 540 aa10.49□□□□□ -0.73
VPS52-217ENST00000478934 Q6ZNX1 250 aa10.49□□□□□ -0.73
VPS52-217ENST00000478934 ZNF554Q86TJ5 538 aa10.49□□□□□ -0.73
VPS52-217ENST00000478934 CYP4Z1Q86W10 505 aa10.49□□□□□ -0.73
VPS52-217ENST00000478934 ZNF420Q8TAQ5 688 aaPredicted RBP10.49□□□□□ -0.73
VPS52-217ENST00000478934 SAMD11Q96NU1 681 aa10.49□□□□□ -0.73
VPS52-217ENST00000478934 HERC2P3Q9BVR0 1158 aa10.49□□□□□ -0.73
VPS52-217ENST00000478934 REXO4Q9GZR2 422 aaKnown RBP10.49□□□□□ -0.73
VPS52-217ENST00000478934 TBC1D23Q9NUY8 699 aa10.49□□□□□ -0.73
VPS52-217ENST00000478934 TMEM45AQ9NWC5 275 aa10.49□□□□□ -0.73
VPS52-217ENST00000478934 CHD9Q3L8U1 2897 aa10.49□□□□□ -0.73
VPS52-217ENST00000478934 FADS2P1A8MWK0 482 aa10.49□□□□□ -0.73
VPS52-217ENST00000478934 E7EQ34 232 aa10.49□□□□□ -0.73
VPS52-217ENST00000478934 RFXANKO14593 260 aa10.49□□□□□ -0.73
VPS52-217ENST00000478934 FUCA1P04066 466 aa10.49□□□□□ -0.73
VPS52-217ENST00000478934 C8AP07357 584 aa10.49□□□□□ -0.73
VPS52-217ENST00000478934 HIST1H2AGP0C0S8 130 aaPredicted RBP10.49□□□□□ -0.73
VPS52-217ENST00000478934 CSF2RAP15509 400 aa10.49□□□□□ -0.73
VPS52-217ENST00000478934 HOXB9P17482 250 aaPredicted RBP10.49□□□□□ -0.73
VPS52-217ENST00000478934 HIST1H2ADP20671 130 aa10.49□□□□□ -0.73
VPS52-217ENST00000478934 SLC6A12P48065 614 aa10.49□□□□□ -0.73
VPS52-217ENST00000478934 CSNK1DP48730 415 aa10.49□□□□□ -0.73
VPS52-217ENST00000478934 CTSCP53634 463 aa10.49□□□□□ -0.73
VPS52-217ENST00000478934 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.49□□□□□ -0.73
VPS52-217ENST00000478934 LYPLAL1Q5VWZ2 237 aa10.49□□□□□ -0.73
VPS52-217ENST00000478934 PRR23BQ6ZRT6 265 aa10.49□□□□□ -0.73
VPS52-217ENST00000478934 ZNF621Q6ZSS3 439 aa10.49□□□□□ -0.73
VPS52-217ENST00000478934 MICAL3Q7RTP6 2002 aa10.49□□□□□ -0.73
VPS52-217ENST00000478934 GLB1L3Q8NCI6 653 aaPredicted RBP10.49□□□□□ -0.73
VPS52-217ENST00000478934 OR2A12Q8NGT7 310 aa10.49□□□□□ -0.73
VPS52-217ENST00000478934 MED8Q96G25 268 aa10.49□□□□□ -0.73
VPS52-217ENST00000478934 HHIPL1Q96JK4 782 aa10.49□□□□□ -0.73
VPS52-217ENST00000478934 HIST1H2AHQ96KK5 128 aa10.49□□□□□ -0.73
VPS52-217ENST00000478934 LYSMD1Q96S90 227 aa10.49□□□□□ -0.73
VPS52-217ENST00000478934 HIST1H2AJQ99878 128 aa10.49□□□□□ -0.73
VPS52-217ENST00000478934 H2AFJQ9BTM1 129 aa10.49□□□□□ -0.73
VPS52-217ENST00000478934 KCNH6Q9H252 994 aa10.49□□□□□ -0.73
VPS52-217ENST00000478934 RIBC2Q9H4K1 309 aa10.49□□□□□ -0.73
VPS52-217ENST00000478934 FAIMQ9NVQ4 179 aa10.49□□□□□ -0.73
VPS52-217ENST00000478934 THG1LQ9NWX6 298 aaKnown RBP10.49□□□□□ -0.73
VPS52-217ENST00000478934 ITM2BQ9Y287 266 aa10.49□□□□□ -0.73
VPS52-217ENST00000478934 GMEB1Q9Y692 573 aa10.49□□□□□ -0.73
VPS52-217ENST00000478934 TRAV19A0A0A6YYK7 116 aa10.48□□□□□ -0.73
VPS52-217ENST00000478934 ZNF701M0R085 212 aaPredicted RBP10.48□□□□□ -0.73
VPS52-217ENST00000478934 LILRB3O75022 631 aa10.48□□□□□ -0.73
VPS52-217ENST00000478934 SCELO95171 688 aa10.48□□□□□ -0.73
VPS52-217ENST00000478934 LRG1P02750 347 aa10.48□□□□□ -0.73
VPS52-217ENST00000478934 GBAP04062 536 aa10.48□□□□□ -0.73
VPS52-217ENST00000478934 AMD1P17707 334 aa10.48□□□□□ -0.73
VPS52-217ENST00000478934 ENGP17813 658 aa10.48□□□□□ -0.73
VPS52-217ENST00000478934 AQP1P29972 269 aa10.48□□□□□ -0.73
VPS52-217ENST00000478934 PBLDP30039 288 aaPredicted RBP10.48□□□□□ -0.73
VPS52-217ENST00000478934 NRIP1P48552 1158 aa10.48□□□□□ -0.73
VPS52-217ENST00000478934 METAP1P53582 386 aa10.48□□□□□ -0.73
VPS52-217ENST00000478934 SLC7A9P82251 487 aa10.48□□□□□ -0.73
VPS52-217ENST00000478934 UGT8Q16880 541 aa10.48□□□□□ -0.73
VPS52-217ENST00000478934 ZNF829Q3KNS6 432 aaPredicted RBP10.48□□□□□ -0.73
VPS52-217ENST00000478934 FRG2Q64ET8 278 aa10.48□□□□□ -0.73
VPS52-217ENST00000478934 CRTC3Q6UUV7 619 aa10.48□□□□□ -0.73
VPS52-217ENST00000478934 FAM43BQ6ZT52 329 aaPredicted RBP10.48□□□□□ -0.73
VPS52-217ENST00000478934 DDX53Q86TM3 631 aaKnown RBP10.48□□□□□ -0.73
VPS52-217ENST00000478934 DCP2Q8IU60 420 aaKnown RBP10.48□□□□□ -0.73
VPS52-217ENST00000478934 CENPSQ8N2Z9 138 aa10.48□□□□□ -0.73
VPS52-217ENST00000478934 MAL2Q969L2 176 aa10.48□□□□□ -0.73
VPS52-217ENST00000478934 PYURFQ96I23 114 aa10.48□□□□□ -0.73
VPS52-217ENST00000478934 FRG2BQ96QU4 278 aa10.48□□□□□ -0.73
VPS52-217ENST00000478934 MCCC1Q96RQ3 725 aaPredicted RBP10.48□□□□□ -0.73
VPS52-217ENST00000478934 RIOK2Q9BVS4 552 aaKnown RBP10.48□□□□□ -0.73
VPS52-217ENST00000478934 ALOXE3Q9BYJ1 711 aa10.48□□□□□ -0.73
VPS52-217ENST00000478934 BAG5Q9UL15 447 aa10.48□□□□□ -0.73
VPS52-217ENST00000478934 REV3LO60673 3130 aa10.48□□□□□ -0.73
VPS52-217ENST00000478934 IGLV3-16A0A075B6K0 115 aa10.48□□□□□ -0.73
VPS52-217ENST00000478934 A0A096LPI6 279 aa10.48□□□□□ -0.73
VPS52-217ENST00000478934 ARHGEF33A8MVX0 844 aa10.48□□□□□ -0.73
VPS52-217ENST00000478934 SLC1A7O00341 560 aa10.48□□□□□ -0.73
VPS52-217ENST00000478934 BCAS1O75363 584 aaPredicted RBP10.48□□□□□ -0.73
VPS52-217ENST00000478934 LEFTY1O75610 366 aa10.48□□□□□ -0.73
VPS52-217ENST00000478934 LAMP1P11279 417 aa10.48□□□□□ -0.73
VPS52-217ENST00000478934 PDHA2P29803 388 aa10.48□□□□□ -0.73
VPS52-217ENST00000478934 OPRL1P41146 370 aa10.48□□□□□ -0.73
VPS52-217ENST00000478934 BDKRB1P46663 353 aa10.48□□□□□ -0.73
VPS52-217ENST00000478934 GP2P55259 537 aaKnown RBP10.48□□□□□ -0.73
VPS52-217ENST00000478934 WNT3P56703 355 aa10.48□□□□□ -0.73
VPS52-217ENST00000478934 ISL1P61371 349 aa10.48□□□□□ -0.73
VPS52-217ENST00000478934 NTHL1P78549 312 aa10.48□□□□□ -0.73
VPS52-217ENST00000478934 TSTA3Q13630 321 aaPredicted RBP10.48□□□□□ -0.73
VPS52-217ENST00000478934 ARSIQ5FYB1 569 aa10.48□□□□□ -0.73
VPS52-217ENST00000478934 XKR6Q5GH73 641 aa10.48□□□□□ -0.73
VPS52-217ENST00000478934 LRIF1Q5T3J3 769 aa10.48□□□□□ -0.73
VPS52-217ENST00000478934 GTF2IRD2BQ6EKJ0 949 aa10.48□□□□□ -0.73
VPS52-217ENST00000478934 SLC16A12Q6ZSM3 486 aa10.48□□□□□ -0.73
VPS52-217ENST00000478934 OTOP2Q7RTS6 562 aa10.48□□□□□ -0.73
VPS52-217ENST00000478934 GTF2IRD2Q86UP8 949 aa10.48□□□□□ -0.73
VPS52-217ENST00000478934 TRIM74Q86UV6 250 aa10.48□□□□□ -0.73
VPS52-217ENST00000478934 ZDHHC21Q8IVQ6 265 aa10.48□□□□□ -0.73
VPS52-217ENST00000478934 GPR156Q8NFN8 814 aa10.48□□□□□ -0.73
VPS52-217ENST00000478934 BORCS5Q969J3 196 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms